FF:12231-129F8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005961 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008085;DRR008957;DRZ000382;DRZ001767;DRZ011732;DRZ013117 | ||
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000325,CL:0000255,CL:0000136 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000266 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor1.CNhs12558.12231-129F8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor1.CNhs12558.12231-129F8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor1.CNhs12558.12231-129F8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor1.CNhs12558.12231-129F8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor1.CNhs12558.12231-129F8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12231-129F8 | |id=FF:12231-129F8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000266 | ||
|is_obsolete= | |||
|library_id=CNhs12558 | |||
|library_id_phase_based=2:CNhs12558 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12231 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12231 | |||
|name=mature adipocyte, donor1 | |name=mature adipocyte, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12558,LSID921,release012,COMPLETED | |profile_hcage=CNhs12558,LSID921,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.159868950153233,0,0,0,0,-0.160318030086386,0.188652303681418,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0.094326151840709,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.107806711959014,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0361395730896693,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188652303681418,0,0,0,0,0,0,0,0,0,0.00260486291736806,0.0490931433081514,0,0,0,-0.111428707284774,0.282284365340267,0,0,0.314914037836844,0.188652303681418,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113773754984672,0,0,0,-0.135252835731554,-0.161088500381129,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0.188652303681418,0,0,0,0,0,0,0,0,0,0.323374456817588,0,-0.285433915070591,-0.143515142523472,0,0,-0.00522088266019001,0,0.319737900306467,0,0,0,0,0,0.188652303681418,0,-0.128119866952565,0,0.36988214622495,0,0,0,0,0.151078777365487,-0.11681992721699,0,-0.079931909308801,-0.0683442610773682,0,0,0,0.0341768549901384,0.305039549956371,0,0.198858416512726,-0.0827201683234173,-0.0212166402563609,0.492318967005073,-0.04680465889238,0,0,0,-0.136872072500811,-0.698641013086421,0,0,0.0380890984013595,0.580932807804252,0,0,1.00579585058216,0,0.51401563334987,-0.0604397418968705,0,-0.0020448503970063,0,0,0,0,0,0,0,0,0,0,0,0.568771057121245,0.174901634882689,-0.0304099808375785,0,0,0,0.421579230246877,0,0,1.31578787818296,-0.240317151169338,0.133327436578428,0.491192536320796,0,0.327438348663773,0.0133328495028758,-0.15718840675074,-0.149545646723954,0.041250454310279,0.439846356123839,0,0.0490931433081514,0.288556828011389,-0.054645738306949,0.16875094067325,-0.0438612643990381,-0.324414902961421,-0.093322159716639,0,0,0.243488966320926,0.0789726212613313,0,0.157152928273373,-0.0698200166625087,0.297904355717659,0.243246391626674,0.279461123773484,0.190043947228182,-0.082204822887847,1.04239128658016,0.706929642249607,0.0158346137096359,0.168554612739414,0.188652303681418,0.770569277123818,0.100900877978695,0.000323855475428903,0.308362404477037,-0.195531475364414,0,0.696276413475248,-0.0683442610773682,0,-0.084236270370085,0.169555715064028,0.188652303681418,0.188652303681418,0.149750431141334,0,0,0,0,0,-0.100000299257502,0.554782368554193,-0.0442032578741272,0.0437915103335014,0.0734370126325655,-0.0340107861022433,0.196195687683549,0,-0.0733753962743083,0.486017831935528,0.122220545452973,0.348734822417661,0,0.351374718042718,-0.508009565266696,0.149663828634692,0.564568730680533,-0.0584468268118252,-0.00194427176298517,0.404505466942686,0.310897286704402,0.661322952364402,0.120953191616826,-0.0881268324752877,0.0910611769967469,-0.381654518956722,-0.25920343380726,0.121260157531923,0.204829940113957,0,0.303595393270945,0,0.259391281908054,0.135545952817138,-0.309412798563718,0.837031828413301,1.19853433965725,-0.00230781392958512,0,0.0907285754645863,1.72041833652093,0,0,0,0,-0.150367083334639,-0.067867890838896,0.641293337475641,0.0496628470022229,0,0.0540362501091041,0,0,0.310960998068506,-0.235476037764389,0,-0.337708926777752,-0.609202914213396,-0.604216041195295,0.304323624379331,0,0,0.0828273240200212,0,1.55409089738099,0.809459653149566,0.0121617386939017,-0.431131020277216,0.066411558819711,0.073858515513906,0.101524539452877,0,0,0.242766931849089,0.501890231561658,0.0748995992212295,0,0,-0.249881296598824,-0.116628112990133,0,0,0,-0.158728764264511,0,0,0,0,0.054986545320848,0,0,0.0901717471139956,0.0654613675978169,0.808897873257715,-0.446383885067653,0,0.188652303681418,0,0,0,0.0380108008879374,0,0,0.61726263598998,-0.0968332978427447,0.196720484630046,0,0,0,0,0.104014497752992,0.116501338211743,0,0.0567895971837858,0,0.340987857891105,0,0,0.233596910517255,0,0,0,0.210147348907132,-0.057730457053664,-0.52308379245695,0,0,0,-0.27695440160179,0,0,0,0,0.384555307898846,0,0,-0.312192273079913,0.0339665983190063,0.0575755898095804,0.107070424134576,0,0.149003962524924,-0.330979163781057,-0.581092678635716,0,0,0.309206200313265,0,0,0.254014678370522,-0.0258768683026886,0,0,0,0,0,0,0,0.629828075673687,0.105423387906711,0,0,0,0,0,0,0,0,0,0,0,-0.349286454715466,-0.0922240566585104,0.565768405156578,0,0,0,0,0,0,-0.0241060230789031,-0.175858543047817,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0.188652303681418,0,0.319737900306467,-0.564807121153884,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.699177278679231,0,0,0,0,0,0.188652303681418,0,0.0449046021003763,0,0,0,0,0.695013499548738,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0.188652303681418,0,0,0,0,0,0,0,0,0,0,0,0.094326151840709,0,0,0,0,0,0,-0.22729982807943,0.094326151840709,0.388534996091179,-0.0388138168742259,0,0,0.152656285928867,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0348580438050884,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.760910955539704,0,0,0,0,0,0,-0.077829491749577,0.177872064864814,0.037509938258592,0,0,0,0.105483377670779,0,0,0.0830318254003127,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.094326151840709,0,0,0,0,0,0.188652303681418,0.176135985631716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,1.11178569867955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188652303681418,0,0,0,0,0,0.188652303681418,0,0.0148658308638703,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.230766142209246,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.0068976540388556,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=3.507 | |rna_weight_ug=3.507 | ||
|sample_age=43 | |sample_age=43 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.21514750255867e-214!GO:0005737;cytoplasm;1.39244967625966e-190!GO:0043231;intracellular membrane-bound organelle;2.77854574403966e-149!GO:0043227;membrane-bound organelle;3.21829885024451e-149!GO:0043226;organelle;4.79533805749237e-145!GO:0043229;intracellular organelle;1.30468241587185e-144!GO:0044444;cytoplasmic part;5.76844394288322e-137!GO:0044422;organelle part;1.37477115858004e-90!GO:0044446;intracellular organelle part;9.66010142270402e-90!GO:0005739;mitochondrion;1.69465161138558e-79!GO:0005515;protein binding;2.96305327757058e-76!GO:0044237;cellular metabolic process;9.13268346754804e-69!GO:0044238;primary metabolic process;8.74218556215364e-66!GO:0032991;macromolecular complex;1.28676665102131e-59!GO:0043233;organelle lumen;3.29774748071187e-54!GO:0031974;membrane-enclosed lumen;3.29774748071187e-54!GO:0043170;macromolecule metabolic process;5.98351556086066e-54!GO:0044429;mitochondrial part;5.98351556086066e-54!GO:0031090;organelle membrane;1.54326049530036e-52!GO:0030529;ribonucleoprotein complex;8.30885409154601e-47!GO:0003723;RNA binding;3.88723878594311e-45!GO:0031967;organelle envelope;4.37689047657463e-43!GO:0031975;envelope;7.82762588948205e-43!GO:0044428;nuclear part;6.19267874859318e-42!GO:0019538;protein metabolic process;1.61140881001789e-40!GO:0005634;nucleus;2.48547650269351e-40!GO:0016043;cellular component organization and biogenesis;8.22926838555694e-39!GO:0005740;mitochondrial envelope;9.23322802196076e-37!GO:0015031;protein transport;1.52927435147087e-36!GO:0033036;macromolecule localization;2.32390179126637e-36!GO:0044260;cellular macromolecule metabolic process;2.65530212325999e-36!GO:0031966;mitochondrial membrane;1.36627159979594e-35!GO:0044267;cellular protein metabolic process;4.46642836216881e-35!GO:0045184;establishment of protein localization;1.82072515371459e-34!GO:0005829;cytosol;3.11771957156725e-34!GO:0008104;protein localization;8.12559343343364e-34!GO:0009058;biosynthetic process;2.78623629730105e-33!GO:0006412;translation;1.25224458971364e-32!GO:0043234;protein complex;6.02893383406216e-32!GO:0044249;cellular biosynthetic process;2.23120727231711e-31!GO:0019866;organelle inner membrane;1.2788392626759e-30!GO:0046907;intracellular transport;2.40898584978948e-30!GO:0005743;mitochondrial inner membrane;2.6303779779302e-30!GO:0005840;ribosome;5.43592739949797e-30!GO:0009059;macromolecule biosynthetic process;6.21102310196231e-28!GO:0031981;nuclear lumen;1.45337009899045e-27!GO:0043283;biopolymer metabolic process;1.43609967625109e-26!GO:0006886;intracellular protein transport;3.28255074594223e-26!GO:0003735;structural constituent of ribosome;1.18530564680345e-24!GO:0006396;RNA processing;6.01050622768886e-24!GO:0033279;ribosomal subunit;2.00412195511398e-23!GO:0016071;mRNA metabolic process;4.32573865459589e-23!GO:0010467;gene expression;4.96598876480239e-23!GO:0044455;mitochondrial membrane part;1.42239481720851e-21!GO:0031980;mitochondrial lumen;4.84149133625748e-21!GO:0005759;mitochondrial matrix;4.84149133625748e-21!GO:0006119;oxidative phosphorylation;5.85105683336492e-21!GO:0065003;macromolecular complex assembly;9.13326713599767e-21!GO:0008380;RNA splicing;1.17395264251586e-20!GO:0005783;endoplasmic reticulum;3.62648492109193e-19!GO:0051186;cofactor metabolic process;1.16835219919801e-18!GO:0000166;nucleotide binding;1.47752165433848e-18!GO:0051649;establishment of cellular localization;2.88683610790746e-18!GO:0051641;cellular localization;3.0073853416073e-18!GO:0005746;mitochondrial respiratory chain;4.26816870931585e-18!GO:0022607;cellular component assembly;5.52385378339313e-18!GO:0006397;mRNA processing;5.57410774755364e-18!GO:0012505;endomembrane system;6.76797490657445e-18!GO:0005654;nucleoplasm;1.35324057197917e-17!GO:0006996;organelle organization and biogenesis;1.67529998697187e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.89001982263174e-17!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.53713957071265e-17!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.40300734991557e-16!GO:0008134;transcription factor binding;1.57923985773089e-16!GO:0016874;ligase activity;1.82917463419472e-16!GO:0044248;cellular catabolic process;2.79435472597346e-16!GO:0006512;ubiquitin cycle;1.06476600577098e-15!GO:0044451;nucleoplasm part;2.27888123036698e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.38164962962802e-15!GO:0044265;cellular macromolecule catabolic process;3.6342664430744e-15!GO:0006091;generation of precursor metabolites and energy;3.68910373357452e-15!GO:0006605;protein targeting;4.11316125102301e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.36573667919528e-15!GO:0016192;vesicle-mediated transport;4.56345305679023e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;5.67098386808295e-15!GO:0016462;pyrophosphatase activity;7.49069712233762e-15!GO:0022618;protein-RNA complex assembly;8.03574306750186e-15!GO:0043285;biopolymer catabolic process;1.00212808280663e-14!GO:0006732;coenzyme metabolic process;1.01166832134109e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.11892293797668e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.7166777553193e-14!GO:0003954;NADH dehydrogenase activity;1.7166777553193e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.7166777553193e-14!GO:0016491;oxidoreductase activity;2.06254601354292e-14!GO:0009055;electron carrier activity;2.16558159901364e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.30639090590436e-14!GO:0044257;cellular protein catabolic process;2.30639090590436e-14!GO:0019941;modification-dependent protein catabolic process;2.55275181910648e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.55275181910648e-14!GO:0005794;Golgi apparatus;3.06117874617902e-14!GO:0017111;nucleoside-triphosphatase activity;4.58654190521788e-14!GO:0009057;macromolecule catabolic process;5.302271263647e-14!GO:0048770;pigment granule;6.49320019753673e-14!GO:0042470;melanosome;6.49320019753673e-14!GO:0044432;endoplasmic reticulum part;6.89753421154587e-14!GO:0012501;programmed cell death;7.9458067130918e-14!GO:0008135;translation factor activity, nucleic acid binding;1.3099934276272e-13!GO:0006457;protein folding;1.61614729669675e-13!GO:0006915;apoptosis;1.72189717576226e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.33272790222753e-13!GO:0042773;ATP synthesis coupled electron transport;2.33272790222753e-13!GO:0005681;spliceosome;2.58467183515621e-13!GO:0030163;protein catabolic process;2.88931802923905e-13!GO:0048523;negative regulation of cellular process;3.11672443166175e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.11672443166175e-13!GO:0045271;respiratory chain complex I;3.11672443166175e-13!GO:0005747;mitochondrial respiratory chain complex I;3.11672443166175e-13!GO:0008219;cell death;3.23218090931686e-13!GO:0016265;death;3.23218090931686e-13!GO:0043412;biopolymer modification;3.37114346139963e-13!GO:0017076;purine nucleotide binding;4.69988820411959e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.15710685697347e-13!GO:0044445;cytosolic part;6.56425148841803e-13!GO:0015935;small ribosomal subunit;7.43864501702537e-13!GO:0051082;unfolded protein binding;8.62015046212834e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.99732039250641e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.59085423436917e-12!GO:0006464;protein modification process;2.63995107953696e-12!GO:0043687;post-translational protein modification;1.08668115649584e-11!GO:0015934;large ribosomal subunit;1.23306940673267e-11!GO:0048519;negative regulation of biological process;1.47506259055553e-11!GO:0048193;Golgi vesicle transport;1.70806249983891e-11!GO:0009056;catabolic process;2.45716467106231e-11!GO:0032553;ribonucleotide binding;2.7878632903182e-11!GO:0032555;purine ribonucleotide binding;2.7878632903182e-11!GO:0006413;translational initiation;4.04154541971477e-11!GO:0005768;endosome;9.28084403958888e-11!GO:0015980;energy derivation by oxidation of organic compounds;9.65289157565619e-11!GO:0006366;transcription from RNA polymerase II promoter;1.10263116592908e-10!GO:0043228;non-membrane-bound organelle;1.12314233022126e-10!GO:0043232;intracellular non-membrane-bound organelle;1.12314233022126e-10!GO:0006446;regulation of translational initiation;1.22403388225051e-10!GO:0005730;nucleolus;1.4150178703305e-10!GO:0006913;nucleocytoplasmic transport;1.52851455245888e-10!GO:0003743;translation initiation factor activity;1.72516603614353e-10!GO:0005789;endoplasmic reticulum membrane;2.77954497497246e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.77954497497246e-10!GO:0051169;nuclear transport;2.96368421170809e-10!GO:0009060;aerobic respiration;3.47504500603663e-10!GO:0045333;cellular respiration;4.12042212169266e-10!GO:0005761;mitochondrial ribosome;4.22465400178779e-10!GO:0000313;organellar ribosome;4.22465400178779e-10!GO:0016604;nuclear body;9.91766268620377e-10!GO:0017038;protein import;1.11652948173457e-09!GO:0016070;RNA metabolic process;1.60122397403382e-09!GO:0003712;transcription cofactor activity;2.00131866112705e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.07326298587495e-09!GO:0050662;coenzyme binding;4.78391219221521e-09!GO:0016607;nuclear speck;4.85816818469169e-09!GO:0050794;regulation of cellular process;6.33551822574333e-09!GO:0030554;adenyl nucleotide binding;6.43004857182214e-09!GO:0005635;nuclear envelope;7.18856659625162e-09!GO:0003676;nucleic acid binding;7.65148224807601e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.69850931012559e-09!GO:0006793;phosphorus metabolic process;1.33897960658336e-08!GO:0006796;phosphate metabolic process;1.33897960658336e-08!GO:0006084;acetyl-CoA metabolic process;1.55752402162564e-08!GO:0008565;protein transporter activity;1.59310967078105e-08!GO:0051187;cofactor catabolic process;2.22275636491336e-08!GO:0006099;tricarboxylic acid cycle;2.56106493026887e-08!GO:0046356;acetyl-CoA catabolic process;2.56106493026887e-08!GO:0006461;protein complex assembly;2.64523364602065e-08!GO:0019752;carboxylic acid metabolic process;2.76249321020664e-08!GO:0008639;small protein conjugating enzyme activity;2.81680713581871e-08!GO:0006259;DNA metabolic process;3.06974765932269e-08!GO:0006082;organic acid metabolic process;3.13190165629597e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.22767108733609e-08!GO:0042981;regulation of apoptosis;3.42017187006176e-08!GO:0043067;regulation of programmed cell death;3.77965508917026e-08!GO:0009109;coenzyme catabolic process;3.9161418604203e-08!GO:0005741;mitochondrial outer membrane;3.9332192054407e-08!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;3.94528914712001e-08!GO:0004842;ubiquitin-protein ligase activity;4.34251869968007e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.42759918726335e-08!GO:0031965;nuclear membrane;5.59117341737634e-08!GO:0043069;negative regulation of programmed cell death;5.59117341737634e-08!GO:0051188;cofactor biosynthetic process;5.66538778617791e-08!GO:0050789;regulation of biological process;8.87686727713202e-08!GO:0043066;negative regulation of apoptosis;9.36009809017147e-08!GO:0019787;small conjugating protein ligase activity;9.46796591869682e-08!GO:0031968;organelle outer membrane;1.02225581576587e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.13645527996251e-07!GO:0003924;GTPase activity;1.50644023949643e-07!GO:0045786;negative regulation of progression through cell cycle;1.65995914035501e-07!GO:0019867;outer membrane;1.77019977149228e-07!GO:0032559;adenyl ribonucleotide binding;1.96690468556681e-07!GO:0016564;transcription repressor activity;2.05523449294284e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;2.15055350765823e-07!GO:0000375;RNA splicing, via transesterification reactions;2.15055350765823e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.15055350765823e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.34877046575918e-07!GO:0044440;endosomal part;2.34877046575918e-07!GO:0010008;endosome membrane;2.34877046575918e-07!GO:0005793;ER-Golgi intermediate compartment;2.49768855582817e-07!GO:0019829;cation-transporting ATPase activity;3.05240919759156e-07!GO:0016881;acid-amino acid ligase activity;3.36466689539913e-07!GO:0051246;regulation of protein metabolic process;3.36466689539913e-07!GO:0005524;ATP binding;3.36466689539913e-07!GO:0006916;anti-apoptosis;3.76530160275471e-07!GO:0015986;ATP synthesis coupled proton transport;3.99880276852486e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.99880276852486e-07!GO:0019899;enzyme binding;5.08796957323292e-07!GO:0048037;cofactor binding;6.14410181910739e-07!GO:0044262;cellular carbohydrate metabolic process;7.20034285706342e-07!GO:0005773;vacuole;7.7752893486716e-07!GO:0006606;protein import into nucleus;7.78344636687425e-07!GO:0030036;actin cytoskeleton organization and biogenesis;7.80848282370094e-07!GO:0032787;monocarboxylic acid metabolic process;8.33984851157776e-07!GO:0051170;nuclear import;8.69812048035756e-07!GO:0007005;mitochondrion organization and biogenesis;9.43437308123835e-07!GO:0016887;ATPase activity;1.20733485095589e-06!GO:0016310;phosphorylation;1.35669443250187e-06!GO:0009892;negative regulation of metabolic process;1.51290468374289e-06!GO:0016044;membrane organization and biogenesis;1.55014388914344e-06!GO:0008361;regulation of cell size;1.62602661010095e-06!GO:0006163;purine nucleotide metabolic process;1.66385667197593e-06!GO:0008092;cytoskeletal protein binding;1.66983417820333e-06!GO:0005770;late endosome;1.70135880710847e-06!GO:0005525;GTP binding;1.79998725784645e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.17927503460557e-06!GO:0031324;negative regulation of cellular metabolic process;2.17927503460557e-06!GO:0006118;electron transport;2.22692966862846e-06!GO:0031252;leading edge;2.61384860358225e-06!GO:0016049;cell growth;2.87628925227009e-06!GO:0003714;transcription corepressor activity;2.87628925227009e-06!GO:0009259;ribonucleotide metabolic process;2.91617154415604e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.14787288064781e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.14787288064781e-06!GO:0044431;Golgi apparatus part;3.21067081024326e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.30610595999566e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.30610595999566e-06!GO:0009150;purine ribonucleotide metabolic process;4.02060640479176e-06!GO:0000323;lytic vacuole;4.26244277736779e-06!GO:0005764;lysosome;4.26244277736779e-06!GO:0042623;ATPase activity, coupled;4.30944659193413e-06!GO:0009199;ribonucleoside triphosphate metabolic process;4.36134752904784e-06!GO:0006164;purine nucleotide biosynthetic process;4.76239082927783e-06!GO:0009142;nucleoside triphosphate biosynthetic process;4.85580472937342e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.85580472937342e-06!GO:0009141;nucleoside triphosphate metabolic process;5.14278096019883e-06!GO:0007243;protein kinase cascade;5.14278096019883e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.39445813923375e-06!GO:0031988;membrane-bound vesicle;5.41250632976526e-06!GO:0006754;ATP biosynthetic process;6.33081464652977e-06!GO:0006753;nucleoside phosphate metabolic process;6.33081464652977e-06!GO:0008654;phospholipid biosynthetic process;6.39583271465389e-06!GO:0009108;coenzyme biosynthetic process;6.39583271465389e-06!GO:0016023;cytoplasmic membrane-bound vesicle;7.18338607779231e-06!GO:0051726;regulation of cell cycle;7.24295896828171e-06!GO:0051789;response to protein stimulus;7.76565265225726e-06!GO:0006986;response to unfolded protein;7.76565265225726e-06!GO:0046034;ATP metabolic process;7.80562329474209e-06!GO:0000074;regulation of progression through cell cycle;8.26650335082539e-06!GO:0048475;coated membrane;9.53805975718512e-06!GO:0030117;membrane coat;9.53805975718512e-06!GO:0005777;peroxisome;1.00932218065033e-05!GO:0042579;microbody;1.00932218065033e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.0544080209352e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.11761999548627e-05!GO:0031982;vesicle;1.12915057285187e-05!GO:0016787;hydrolase activity;1.13888708289738e-05!GO:0009260;ribonucleotide biosynthetic process;1.16606289453771e-05!GO:0044255;cellular lipid metabolic process;1.441894176745e-05!GO:0030029;actin filament-based process;1.5451762716289e-05!GO:0045259;proton-transporting ATP synthase complex;1.56171411389889e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.58665185778183e-05!GO:0032561;guanyl ribonucleotide binding;1.73789508620279e-05!GO:0019001;guanyl nucleotide binding;1.73789508620279e-05!GO:0044453;nuclear membrane part;1.88255004764389e-05!GO:0032446;protein modification by small protein conjugation;1.93586726375272e-05!GO:0016567;protein ubiquitination;2.06392292871979e-05!GO:0031410;cytoplasmic vesicle;2.13547295604394e-05!GO:0030120;vesicle coat;2.15902710248343e-05!GO:0030662;coated vesicle membrane;2.15902710248343e-05!GO:0007264;small GTPase mediated signal transduction;2.1616985954338e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.36366948715762e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.62755624036749e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.62755624036749e-05!GO:0006629;lipid metabolic process;3.30819685597626e-05!GO:0009719;response to endogenous stimulus;3.31401637074699e-05!GO:0065002;intracellular protein transport across a membrane;3.34038988935498e-05!GO:0005769;early endosome;3.43466728441624e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.60662217016464e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.60662217016464e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.60662217016464e-05!GO:0007049;cell cycle;3.63444596122018e-05!GO:0005798;Golgi-associated vesicle;3.76772687660808e-05!GO:0065007;biological regulation;3.92082418777557e-05!GO:0000151;ubiquitin ligase complex;3.9650597989877e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.32274025727711e-05!GO:0046983;protein dimerization activity;4.60679918879047e-05!GO:0006974;response to DNA damage stimulus;4.64615604642031e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.8074487960841e-05!GO:0016481;negative regulation of transcription;4.86101173527079e-05!GO:0001558;regulation of cell growth;5.60555726061756e-05!GO:0043566;structure-specific DNA binding;5.72293243315311e-05!GO:0006950;response to stress;5.75796648047133e-05!GO:0043038;amino acid activation;6.14531562598953e-05!GO:0006418;tRNA aminoacylation for protein translation;6.14531562598953e-05!GO:0043039;tRNA aminoacylation;6.14531562598953e-05!GO:0050657;nucleic acid transport;6.23127517913999e-05!GO:0051236;establishment of RNA localization;6.23127517913999e-05!GO:0050658;RNA transport;6.23127517913999e-05!GO:0051287;NAD binding;6.2697813799739e-05!GO:0005643;nuclear pore;6.47600153174498e-05!GO:0048522;positive regulation of cellular process;6.82722874798225e-05!GO:0065009;regulation of a molecular function;8.54382950766887e-05!GO:0006403;RNA localization;8.68598263277534e-05!GO:0005788;endoplasmic reticulum lumen;9.5477802505304e-05!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.000103071845463139!GO:0006631;fatty acid metabolic process;0.000103071845463139!GO:0005839;proteasome core complex (sensu Eukaryota);0.00011145109721088!GO:0006635;fatty acid beta-oxidation;0.000135216607033996!GO:0016568;chromatin modification;0.000135308646217076!GO:0009117;nucleotide metabolic process;0.000146555680943961!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000152220072034395!GO:0019318;hexose metabolic process;0.000159748270996208!GO:0007265;Ras protein signal transduction;0.000161627559459287!GO:0006006;glucose metabolic process;0.000166672885516364!GO:0004386;helicase activity;0.000173285935869812!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000176468424917534!GO:0006979;response to oxidative stress;0.000184707376325621!GO:0048471;perinuclear region of cytoplasm;0.000188851422304638!GO:0007050;cell cycle arrest;0.000189839825887063!GO:0006897;endocytosis;0.000197998129093693!GO:0010324;membrane invagination;0.000197998129093693!GO:0000139;Golgi membrane;0.000202713673517977!GO:0048468;cell development;0.000210744198498131!GO:0003713;transcription coactivator activity;0.00021299937117466!GO:0006613;cotranslational protein targeting to membrane;0.000231771588634817!GO:0042254;ribosome biogenesis and assembly;0.000257814018751315!GO:0006752;group transfer coenzyme metabolic process;0.000261281430062818!GO:0005996;monosaccharide metabolic process;0.000265062115216541!GO:0046930;pore complex;0.000298534844172926!GO:0016740;transferase activity;0.000314112017222541!GO:0044438;microbody part;0.000315151984091482!GO:0044439;peroxisomal part;0.000315151984091482!GO:0006066;alcohol metabolic process;0.000318363859415067!GO:0005762;mitochondrial large ribosomal subunit;0.000321121000105372!GO:0000315;organellar large ribosomal subunit;0.000321121000105372!GO:0042802;identical protein binding;0.000326619287730194!GO:0005667;transcription factor complex;0.000330116710557105!GO:0030133;transport vesicle;0.000339392155783622!GO:0008610;lipid biosynthetic process;0.000345404586552445!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000345640616313428!GO:0008026;ATP-dependent helicase activity;0.000349446684360908!GO:0051540;metal cluster binding;0.000359092908753057!GO:0051536;iron-sulfur cluster binding;0.000359092908753057!GO:0030867;rough endoplasmic reticulum membrane;0.000383876297310291!GO:0040008;regulation of growth;0.000402664684699519!GO:0006323;DNA packaging;0.000409987947609251!GO:0000245;spliceosome assembly;0.00042418129063184!GO:0051427;hormone receptor binding;0.000431187695030966!GO:0016563;transcription activator activity;0.00043233982698152!GO:0006399;tRNA metabolic process;0.000446780762761265!GO:0016197;endosome transport;0.000451510600814206!GO:0008286;insulin receptor signaling pathway;0.00046024632393506!GO:0045892;negative regulation of transcription, DNA-dependent;0.000484433492888072!GO:0007242;intracellular signaling cascade;0.000538346419023004!GO:0005791;rough endoplasmic reticulum;0.000570826455111744!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000614973733850762!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000615402272714905!GO:0031903;microbody membrane;0.000635071934873936!GO:0005778;peroxisomal membrane;0.000635071934873936!GO:0003697;single-stranded DNA binding;0.000635071934873936!GO:0001726;ruffle;0.000693853834994938!GO:0051028;mRNA transport;0.000720114074865634!GO:0005048;signal sequence binding;0.000732188983945095!GO:0031902;late endosome membrane;0.000768319105671915!GO:0035257;nuclear hormone receptor binding;0.000815793590334628!GO:0005905;coated pit;0.000822032853974939!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000832550417894787!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000832550417894787!GO:0003724;RNA helicase activity;0.000886487549305828!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000886930177644367!GO:0015002;heme-copper terminal oxidase activity;0.000886930177644367!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000886930177644367!GO:0004129;cytochrome-c oxidase activity;0.000886930177644367!GO:0048518;positive regulation of biological process;0.000951281756495273!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000968926198391103!GO:0009966;regulation of signal transduction;0.00122603864638382!GO:0007010;cytoskeleton organization and biogenesis;0.00126155956008601!GO:0043021;ribonucleoprotein binding;0.00127398893202271!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00127650158816919!GO:0015399;primary active transmembrane transporter activity;0.00127650158816919!GO:0051920;peroxiredoxin activity;0.00141296450084091!GO:0003779;actin binding;0.0014279636217001!GO:0006281;DNA repair;0.00144275989622898!GO:0004298;threonine endopeptidase activity;0.00154560712902714!GO:0051539;4 iron, 4 sulfur cluster binding;0.00154644323734628!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00157180224840802!GO:0022890;inorganic cation transmembrane transporter activity;0.0016678388209526!GO:0050790;regulation of catalytic activity;0.00168900713771276!GO:0045454;cell redox homeostasis;0.00179062005129613!GO:0031072;heat shock protein binding;0.00184192477202622!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00187211756705765!GO:0046474;glycerophospholipid biosynthetic process;0.00199476765114738!GO:0004860;protein kinase inhibitor activity;0.00199869391538807!GO:0051087;chaperone binding;0.00208236733235921!GO:0030145;manganese ion binding;0.0021209012794741!GO:0006612;protein targeting to membrane;0.0021335028248194!GO:0006402;mRNA catabolic process;0.00220712395287079!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00222736430290043!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00222736430290043!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00222736430290043!GO:0019222;regulation of metabolic process;0.00223746841652265!GO:0046467;membrane lipid biosynthetic process;0.00235348605371159!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00241734631621439!GO:0051128;regulation of cellular component organization and biogenesis;0.00242094149365088!GO:0007006;mitochondrial membrane organization and biogenesis;0.00252268428983992!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00267079859205943!GO:0043681;protein import into mitochondrion;0.0027720635485943!GO:0016853;isomerase activity;0.00285539516611649!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00288468427737266!GO:0030532;small nuclear ribonucleoprotein complex;0.00299820783735749!GO:0030132;clathrin coat of coated pit;0.00300519057513314!GO:0033673;negative regulation of kinase activity;0.00300519057513314!GO:0006469;negative regulation of protein kinase activity;0.00300519057513314!GO:0030518;steroid hormone receptor signaling pathway;0.00309825050824143!GO:0003690;double-stranded DNA binding;0.00310863225196823!GO:0008287;protein serine/threonine phosphatase complex;0.00333990759716655!GO:0003729;mRNA binding;0.0033424780643758!GO:0031901;early endosome membrane;0.00343538685843881!GO:0022402;cell cycle process;0.00346473187041086!GO:0005975;carbohydrate metabolic process;0.0035217494059345!GO:0006364;rRNA processing;0.00364472070275984!GO:0043623;cellular protein complex assembly;0.0036464091631138!GO:0017091;AU-rich element binding;0.00369508803816046!GO:0050779;RNA destabilization;0.00369508803816046!GO:0000289;poly(A) tail shortening;0.00369508803816046!GO:0019395;fatty acid oxidation;0.0037657825128277!GO:0006839;mitochondrial transport;0.00376965215513336!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00382179457392472!GO:0043492;ATPase activity, coupled to movement of substances;0.00383683983002254!GO:0005083;small GTPase regulator activity;0.00383683983002254!GO:0000314;organellar small ribosomal subunit;0.00397987902380904!GO:0005763;mitochondrial small ribosomal subunit;0.00397987902380904!GO:0031406;carboxylic acid binding;0.00464810793226783!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00475268118488736!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00476140559803322!GO:0016791;phosphoric monoester hydrolase activity;0.00500082846585664!GO:0009165;nucleotide biosynthetic process;0.00500628111477311!GO:0008047;enzyme activator activity;0.00506605400234008!GO:0006749;glutathione metabolic process;0.00509291931567658!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00522486789944849!GO:0003746;translation elongation factor activity;0.00531349806397582!GO:0016885;ligase activity, forming carbon-carbon bonds;0.00547466958880244!GO:0006778;porphyrin metabolic process;0.00547466958880244!GO:0033013;tetrapyrrole metabolic process;0.00547466958880244!GO:0005774;vacuolar membrane;0.00557578531804775!GO:0015631;tubulin binding;0.00565216312608779!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00597749141890077!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00604068634314369!GO:0051348;negative regulation of transferase activity;0.00642336321828254!GO:0043488;regulation of mRNA stability;0.00647096212471592!GO:0043487;regulation of RNA stability;0.00647096212471592!GO:0030027;lamellipodium;0.00647096212471592!GO:0004722;protein serine/threonine phosphatase activity;0.00670830280283393!GO:0051168;nuclear export;0.00671364857209962!GO:0051276;chromosome organization and biogenesis;0.00679172219498369!GO:0046489;phosphoinositide biosynthetic process;0.00686699351641188!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00709841305437844!GO:0048487;beta-tubulin binding;0.00714125619837165!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00729742809058327!GO:0019210;kinase inhibitor activity;0.00748911276115997!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.00753853250596147!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00764070633187457!GO:0004300;enoyl-CoA hydratase activity;0.00768009027467556!GO:0033116;ER-Golgi intermediate compartment membrane;0.00772071702665457!GO:0006417;regulation of translation;0.00772621308808324!GO:0004674;protein serine/threonine kinase activity;0.00778814858247817!GO:0008250;oligosaccharyl transferase complex;0.00789756653175887!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00794622027359075!GO:0051098;regulation of binding;0.00839171786384445!GO:0004576;oligosaccharyl transferase activity;0.00853541891655517!GO:0016072;rRNA metabolic process;0.00854853154684346!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.00859723908305863!GO:0005159;insulin-like growth factor receptor binding;0.00880572367199452!GO:0019843;rRNA binding;0.00902252070905585!GO:0005100;Rho GTPase activator activity;0.00911809160174243!GO:0008154;actin polymerization and/or depolymerization;0.00926282669387795!GO:0016125;sterol metabolic process;0.00929623973066533!GO:0000096;sulfur amino acid metabolic process;0.00933941797662052!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00933941797662052!GO:0003995;acyl-CoA dehydrogenase activity;0.00933941797662052!GO:0043284;biopolymer biosynthetic process;0.00935833168284439!GO:0005096;GTPase activator activity;0.00941022806911082!GO:0005099;Ras GTPase activator activity;0.00964133804850454!GO:0016779;nucleotidyltransferase activity;0.00971764393779858!GO:0045792;negative regulation of cell size;0.00985352345211379!GO:0008186;RNA-dependent ATPase activity;0.00989658762055319!GO:0005813;centrosome;0.00992605566619817!GO:0048154;S100 beta binding;0.0103334397172743!GO:0050660;FAD binding;0.0103395519759985!GO:0016859;cis-trans isomerase activity;0.0103395519759985!GO:0045941;positive regulation of transcription;0.0104134594602064!GO:0007030;Golgi organization and biogenesis;0.0104849560458236!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.010544298398457!GO:0030663;COPI coated vesicle membrane;0.0105995034006253!GO:0030126;COPI vesicle coat;0.0105995034006253!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0105995034006253!GO:0030503;regulation of cell redox homeostasis;0.0105995034006253!GO:0050811;GABA receptor binding;0.0108807874334031!GO:0009967;positive regulation of signal transduction;0.0109265596934395!GO:0006891;intra-Golgi vesicle-mediated transport;0.0110401606731159!GO:0030308;negative regulation of cell growth;0.0111996508133024!GO:0030695;GTPase regulator activity;0.011252002246818!GO:0045893;positive regulation of transcription, DNA-dependent;0.011252002246818!GO:0005765;lysosomal membrane;0.0112890243898694!GO:0009081;branched chain family amino acid metabolic process;0.0117184646648759!GO:0030522;intracellular receptor-mediated signaling pathway;0.0121174463417802!GO:0032507;maintenance of cellular protein localization;0.0121723260231106!GO:0016408;C-acyltransferase activity;0.0121747911236543!GO:0009889;regulation of biosynthetic process;0.0123339179603734!GO:0030118;clathrin coat;0.012753960041145!GO:0007266;Rho protein signal transduction;0.0131035947034818!GO:0005885;Arp2/3 protein complex;0.0133003384205144!GO:0044437;vacuolar part;0.0135130042585565!GO:0007034;vacuolar transport;0.0135260573880986!GO:0006007;glucose catabolic process;0.0135260573880986!GO:0008139;nuclear localization sequence binding;0.0135260573880986!GO:0006779;porphyrin biosynthetic process;0.0136630918804315!GO:0033014;tetrapyrrole biosynthetic process;0.0136630918804315!GO:0004680;casein kinase activity;0.0138542383620811!GO:0006260;DNA replication;0.0138542383620811!GO:0045926;negative regulation of growth;0.0140159243168391!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0141167798554782!GO:0006607;NLS-bearing substrate import into nucleus;0.0143099873974244!GO:0046483;heterocycle metabolic process;0.0148164300123625!GO:0015992;proton transport;0.0148255408686407!GO:0006818;hydrogen transport;0.014899292207803!GO:0051336;regulation of hydrolase activity;0.0149656309627627!GO:0006354;RNA elongation;0.0156407041763424!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0157173404800568!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0157173404800568!GO:0009083;branched chain family amino acid catabolic process;0.0157780872906899!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0158191600831059!GO:0035258;steroid hormone receptor binding;0.0159237898364981!GO:0003817;complement factor D activity;0.0159268776963973!GO:0022415;viral reproductive process;0.0161827055426852!GO:0030137;COPI-coated vesicle;0.0161827055426852!GO:0006740;NADPH regeneration;0.0161827055426852!GO:0006098;pentose-phosphate shunt;0.0161827055426852!GO:0016421;CoA carboxylase activity;0.0161827055426852!GO:0043204;perikaryon;0.0164539918659571!GO:0016126;sterol biosynthetic process;0.0164618928421228!GO:0031326;regulation of cellular biosynthetic process;0.0166735275419314!GO:0004721;phosphoprotein phosphatase activity;0.0169490314662456!GO:0016311;dephosphorylation;0.0172512925443709!GO:0065004;protein-DNA complex assembly;0.0172915416524652!GO:0003711;transcription elongation regulator activity;0.0175139327592989!GO:0006414;translational elongation;0.0176623377493466!GO:0042168;heme metabolic process;0.0177794592621669!GO:0006650;glycerophospholipid metabolic process;0.0183655902615792!GO:0051101;regulation of DNA binding;0.0183708028731879!GO:0008203;cholesterol metabolic process;0.0188656932567171!GO:0043065;positive regulation of apoptosis;0.0188656932567171!GO:0048500;signal recognition particle;0.0188656932567171!GO:0030139;endocytic vesicle;0.0191208130454639!GO:0016788;hydrolase activity, acting on ester bonds;0.0191770646393494!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0191848247630725!GO:0008234;cysteine-type peptidase activity;0.01950776112017!GO:0015630;microtubule cytoskeleton;0.0195354185377873!GO:0045637;regulation of myeloid cell differentiation;0.0202962062134088!GO:0035035;histone acetyltransferase binding;0.0205648240776623!GO:0000902;cell morphogenesis;0.020666722913144!GO:0032989;cellular structure morphogenesis;0.020666722913144!GO:0005815;microtubule organizing center;0.0211965765978365!GO:0003702;RNA polymerase II transcription factor activity;0.0214650519127014!GO:0006401;RNA catabolic process;0.021544747094812!GO:0030041;actin filament polymerization;0.0217625252656159!GO:0004004;ATP-dependent RNA helicase activity;0.0218474641850862!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0219665980434278!GO:0017166;vinculin binding;0.0220004250833865!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0227782530994011!GO:0004784;superoxide dismutase activity;0.0227782530994011!GO:0043068;positive regulation of programmed cell death;0.0233094447345297!GO:0005869;dynactin complex;0.0235083016305249!GO:0006767;water-soluble vitamin metabolic process;0.0235820450640911!GO:0045185;maintenance of protein localization;0.0242247116779469!GO:0015923;mannosidase activity;0.0244141829068491!GO:0031625;ubiquitin protein ligase binding;0.0246185599323552!GO:0051651;maintenance of cellular localization;0.0250832332928126!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0253903742340183!GO:0045947;negative regulation of translational initiation;0.0256903029556529!GO:0001666;response to hypoxia;0.0260616197263279!GO:0019783;small conjugating protein-specific protease activity;0.026179348239697!GO:0051252;regulation of RNA metabolic process;0.026179348239697!GO:0030140;trans-Golgi network transport vesicle;0.0263003098219427!GO:0030742;GTP-dependent protein binding;0.0263003098219427!GO:0009374;biotin binding;0.0270362503276193!GO:0019904;protein domain specific binding;0.0270524646507621!GO:0004448;isocitrate dehydrogenase activity;0.0270524646507621!GO:0006352;transcription initiation;0.0270524646507621!GO:0043086;negative regulation of catalytic activity;0.0275236877420526!GO:0006984;ER-nuclear signaling pathway;0.0277185551676668!GO:0030176;integral to endoplasmic reticulum membrane;0.0283412109578573!GO:0046364;monosaccharide biosynthetic process;0.0288225231488845!GO:0046165;alcohol biosynthetic process;0.0288225231488845!GO:0007041;lysosomal transport;0.0288456273369324!GO:0030235;nitric-oxide synthase regulator activity;0.0294308997971139!GO:0030658;transport vesicle membrane;0.0305978009396565!GO:0008629;induction of apoptosis by intracellular signals;0.0306330560372187!GO:0030134;ER to Golgi transport vesicle;0.0309279286851888!GO:0043087;regulation of GTPase activity;0.0310821095726402!GO:0008632;apoptotic program;0.03118472466132!GO:0016790;thiolester hydrolase activity;0.0318076671041167!GO:0030659;cytoplasmic vesicle membrane;0.0318076671041167!GO:0043407;negative regulation of MAP kinase activity;0.0318362292004426!GO:0046822;regulation of nucleocytoplasmic transport;0.0319178276205962!GO:0006672;ceramide metabolic process;0.032185081024128!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0327973893567461!GO:0042158;lipoprotein biosynthetic process;0.0329419012088438!GO:0004843;ubiquitin-specific protease activity;0.033782875951182!GO:0000062;acyl-CoA binding;0.0338855788919957!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0344928948283111!GO:0046519;sphingoid metabolic process;0.0347707249898209!GO:0006376;mRNA splice site selection;0.0349802800738099!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0349802800738099!GO:0033559;unsaturated fatty acid metabolic process;0.0350258831162042!GO:0006636;unsaturated fatty acid biosynthetic process;0.0350258831162042!GO:0031529;ruffle organization and biogenesis;0.03551644359886!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0357620714248093!GO:0006626;protein targeting to mitochondrion;0.0357698001704867!GO:0006383;transcription from RNA polymerase III promoter;0.0364855443186887!GO:0006739;NADP metabolic process;0.0367770152947443!GO:0016301;kinase activity;0.0371652282925343!GO:0000287;magnesium ion binding;0.037240111133726!GO:0006644;phospholipid metabolic process;0.0373372368491495!GO:0005758;mitochondrial intermembrane space;0.0374310932195592!GO:0008383;manganese superoxide dismutase activity;0.0374852637948232!GO:0001315;age-dependent response to reactive oxygen species;0.0374852637948232!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0374978964094242!GO:0006892;post-Golgi vesicle-mediated transport;0.0380882466455124!GO:0030911;TPR domain binding;0.0382625488312248!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0384880533751623!GO:0045047;protein targeting to ER;0.0384880533751623!GO:0006695;cholesterol biosynthetic process;0.0403997331404101!GO:0018196;peptidyl-asparagine modification;0.0404894243725854!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0404894243725854!GO:0006497;protein amino acid lipidation;0.0418667220706887!GO:0001725;stress fiber;0.0419600763317123!GO:0032432;actin filament bundle;0.0419600763317123!GO:0015036;disulfide oxidoreductase activity;0.0425886021702024!GO:0006643;membrane lipid metabolic process;0.0428034871629089!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0433989130534174!GO:0000209;protein polyubiquitination;0.0434673186963781!GO:0030384;phosphoinositide metabolic process;0.0436146034046191!GO:0007040;lysosome organization and biogenesis;0.0437926827006534!GO:0006112;energy reserve metabolic process;0.0441938312759759!GO:0030521;androgen receptor signaling pathway;0.0441938312759759!GO:0046209;nitric oxide metabolic process;0.0445477073251254!GO:0006809;nitric oxide biosynthetic process;0.0445477073251254!GO:0006783;heme biosynthetic process;0.0446913657808678!GO:0006611;protein export from nucleus;0.0452976436360493!GO:0045334;clathrin-coated endocytic vesicle;0.0452976436360493!GO:0051329;interphase of mitotic cell cycle;0.0452976436360493!GO:0003899;DNA-directed RNA polymerase activity;0.0454962597562058!GO:0008637;apoptotic mitochondrial changes;0.0456062382339487!GO:0016829;lyase activity;0.0456258772622422!GO:0045045;secretory pathway;0.0456949388259983!GO:0006090;pyruvate metabolic process;0.0456949388259983!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0461287431058345!GO:0051338;regulation of transferase activity;0.0461287431058345!GO:0006693;prostaglandin metabolic process;0.0461287431058345!GO:0006692;prostanoid metabolic process;0.0461287431058345!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0465985313672642!GO:0004221;ubiquitin thiolesterase activity;0.0469588823182811!GO:0008017;microtubule binding;0.0473843504224016!GO:0005801;cis-Golgi network;0.0477405040679016!GO:0005977;glycogen metabolic process;0.0478957319462762!GO:0031970;organelle envelope lumen;0.048144502064594!GO:0016363;nuclear matrix;0.0484362488022543!GO:0006333;chromatin assembly or disassembly;0.0489368615305949!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0490065191125328!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0493255119814534!GO:0010257;NADH dehydrogenase complex assembly;0.0493255119814534!GO:0033108;mitochondrial respiratory chain complex assembly;0.0493255119814534!GO:0012506;vesicle membrane;0.0493354180776175!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0494478103418915!GO:0033043;regulation of organelle organization and biogenesis;0.0494478103418915!GO:0031589;cell-substrate adhesion;0.0497969854515442 | |||
|sample_id=12231 | |sample_id=12231 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=adipose tissue | |sample_tissue=adipose tissue | ||
|top_motifs=STAT2,4,6:3.06036228342;RORA:2.7121529365;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.57338018649;PDX1:2.43989382877;ESRRA:2.19979850611;HBP1_HMGB_SSRP1_UBTF:2.04488373106;FOX{D1,D2}:2.02798282219;FOXL1:1.92530102202;NFIL3:1.91028670307;ATF6:1.89494036551;AR:1.88481624006;IKZF1:1.7780146974;TGIF1:1.76039654924;NFATC1..3:1.68881792741;TFCP2:1.6862955556;FOXO1,3,4:1.6201105562;SP1:1.5360233335;NANOG:1.48483992619;EGR1..3:1.45292725555;TLX1..3_NFIC{dimer}:1.43943343364;SPZ1:1.40606647785;ATF2:1.3997486429;TFAP2B:1.38108833083;TFAP2{A,C}:1.31840887393;STAT1,3:1.29510345806;MEF2{A,B,C,D}:1.28666893464;XBP1:1.27538590443;MYBL2:1.2685571397;ZNF238:1.26289712796;TBP:1.21714337124;HNF4A_NR2F1,2:1.20626765328;HIC1:1.19400035216;SRF:1.19317532441;MAZ:1.16053414336;SOX5:1.11714075999;DBP:1.07463500659;NR3C1:1.06273879281;GTF2A1,2:1.04820365531;FOXA2:1.01879301405;EP300:1.01490826699;MTF1:1.01048559179;MED-1{core}:0.999817091827;PRRX1,2:0.905045018453;NFIX:0.889374490135;bHLH_family:0.885922746335;MTE{core}:0.884936053267;GZF1:0.882028425098;PAX6:0.871981587322;TEAD1:0.870107110749;NR1H4:0.83809124446;FOXD3:0.828446204615;NFE2L1:0.815810527256;JUN:0.809196719873;HLF:0.804765051549;PATZ1:0.796182300014;ATF4:0.770774867021;HOX{A4,D4}:0.766938650331;FOXN1:0.749211037844;NHLH1,2:0.737140015325;GCM1,2:0.733984789996;NFE2:0.724117342698;HOXA9_MEIS1:0.65531714875;CEBPA,B_DDIT3:0.647093934014;ADNP_IRX_SIX_ZHX:0.641100137968;HMX1:0.631057498292;MAFB:0.59557491425;EBF1:0.585241552797;GFI1B:0.565326342028;GTF2I:0.541531031536;IKZF2:0.53421471489;HIF1A:0.498651914967;RXR{A,B,G}:0.481661154553;MYFfamily:0.478218239202;CREB1:0.446310108638;HOX{A5,B5}:0.438246883453;FOXP1:0.434848741982;TEF:0.39912738623;NFKB1_REL_RELA:0.394115200936;FOS_FOS{B,L1}_JUN{B,D}:0.377538013832;FOXP3:0.363478126918;BREu{core}:0.351427973533;TFAP4:0.328399844829;ATF5_CREB3:0.326550659559;IRF7:0.321292020465;ZFP161:0.314970224647;SREBF1,2:0.303351808301;ARID5B:0.274884736932;RFX2..5_RFXANK_RFXAP:0.222060709731;CDC5L:0.215061150706;FOSL2:0.214681817539;EN1,2:0.212507440805;HSF1,2:0.181637476629;PAX8:0.161515927951;HNF1A:0.154957626347;ZIC1..3:0.147934958959;POU6F1:0.135702650549;FOX{F1,F2,J1}:0.0689172509637;MZF1:0.0357407529209;PAX2:0.0240618459487;TBX4,5:0.0141012679673;DMAP1_NCOR{1,2}_SMARC:0.0045108392931;IRF1,2:0.00396544440915;TLX2:7.71493718108e-05;ZNF423:-0.00935286306566;ZNF148:-0.0250981721454;BACH2:-0.028726473086;PITX1..3:-0.0411143220165;ETS1,2:-0.0635668220022;NFE2L2:-0.109948605619;XCPE1{core}:-0.12605301181;GLI1..3:-0.131686973848;LHX3,4:-0.146099462051;NFY{A,B,C}:-0.165952315924;HAND1,2:-0.185472153318;REST:-0.186174490458;NKX3-2:-0.189058638905;GATA6:-0.190404315897;STAT5{A,B}:-0.193863215943;NR6A1:-0.195486116057;RBPJ:-0.196625435169;RFX1:-0.202270423427;FOXQ1:-0.203929517356;TP53:-0.212596628176;PAX5:-0.224877529232;CUX2:-0.2334303765;NR5A1,2:-0.238274370534;ZNF384:-0.24071085752;GFI1:-0.241951547535;NKX2-1,4:-0.245832007819;NKX2-3_NKX2-5:-0.266064234375;NANOG{mouse}:-0.27562792186;SMAD1..7,9:-0.275758063448;NKX6-1,2:-0.278760318081;PAX1,9:-0.286993976224;ELF1,2,4:-0.299502496658;BPTF:-0.329133559674;ESR1:-0.351986941069;HMGA1,2:-0.364482657456;SOX17:-0.397043008519;SPIB:-0.398282427084;PAX3,7:-0.416030183367;SPI1:-0.418812136293;ZNF143:-0.422480768724;ZBTB6:-0.426950562412;FOX{I1,J2}:-0.454582833277;GATA4:-0.461415561194;OCT4_SOX2{dimer}:-0.465734070246;HES1:-0.511211426723;NRF1:-0.535418132754;PPARG:-0.538012933415;RREB1:-0.541994900765;RUNX1..3:-0.552014442429;SOX2:-0.560944223964;AHR_ARNT_ARNT2:-0.564848362672;PAX4:-0.579058611273;HOX{A6,A7,B6,B7}:-0.580297704517;CRX:-0.583833544249;YY1:-0.597515108451;PRDM1:-0.618045759237;LEF1_TCF7_TCF7L1,2:-0.638384412129;POU2F1..3:-0.654429322615;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.664075563976;ALX4:-0.671404830585;PBX1:-0.694424596882;TAL1_TCF{3,4,12}:-0.724232871768;TFDP1:-0.732238291799;SOX{8,9,10}:-0.791599508317;POU5F1:-0.802823524212;T:-0.825232517835;KLF4:-0.841689501331;NKX2-2,8:-0.864466544929;SNAI1..3:-0.887411326673;MYB:-0.900539735882;RXRA_VDR{dimer}:-0.953250005707;ZEB1:-0.960526677736;E2F1..5:-0.981876000096;VSX1,2:-1.03681532921;FOXM1:-1.04062918607;LMO2:-1.07157165992;ALX1:-1.11225762284;UFEwm:-1.16110217368;POU3F1..4:-1.23646581334;ELK1,4_GABP{A,B1}:-1.25800684357;POU1F1:-1.28069471057;EVI1:-1.33425643684;ONECUT1,2:-1.34778211244;MYOD1:-1.42171794445;TOPORS:-1.46751146478;NKX3-1:-1.56175641855;CDX1,2,4:-1.59074568581;ZBTB16:-1.60808913421;AIRE:-1.86411841281 | |top_motifs=STAT2,4,6:3.06036228342;RORA:2.7121529365;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.57338018649;PDX1:2.43989382877;ESRRA:2.19979850611;HBP1_HMGB_SSRP1_UBTF:2.04488373106;FOX{D1,D2}:2.02798282219;FOXL1:1.92530102202;NFIL3:1.91028670307;ATF6:1.89494036551;AR:1.88481624006;IKZF1:1.7780146974;TGIF1:1.76039654924;NFATC1..3:1.68881792741;TFCP2:1.6862955556;FOXO1,3,4:1.6201105562;SP1:1.5360233335;NANOG:1.48483992619;EGR1..3:1.45292725555;TLX1..3_NFIC{dimer}:1.43943343364;SPZ1:1.40606647785;ATF2:1.3997486429;TFAP2B:1.38108833083;TFAP2{A,C}:1.31840887393;STAT1,3:1.29510345806;MEF2{A,B,C,D}:1.28666893464;XBP1:1.27538590443;MYBL2:1.2685571397;ZNF238:1.26289712796;TBP:1.21714337124;HNF4A_NR2F1,2:1.20626765328;HIC1:1.19400035216;SRF:1.19317532441;MAZ:1.16053414336;SOX5:1.11714075999;DBP:1.07463500659;NR3C1:1.06273879281;GTF2A1,2:1.04820365531;FOXA2:1.01879301405;EP300:1.01490826699;MTF1:1.01048559179;MED-1{core}:0.999817091827;PRRX1,2:0.905045018453;NFIX:0.889374490135;bHLH_family:0.885922746335;MTE{core}:0.884936053267;GZF1:0.882028425098;PAX6:0.871981587322;TEAD1:0.870107110749;NR1H4:0.83809124446;FOXD3:0.828446204615;NFE2L1:0.815810527256;JUN:0.809196719873;HLF:0.804765051549;PATZ1:0.796182300014;ATF4:0.770774867021;HOX{A4,D4}:0.766938650331;FOXN1:0.749211037844;NHLH1,2:0.737140015325;GCM1,2:0.733984789996;NFE2:0.724117342698;HOXA9_MEIS1:0.65531714875;CEBPA,B_DDIT3:0.647093934014;ADNP_IRX_SIX_ZHX:0.641100137968;HMX1:0.631057498292;MAFB:0.59557491425;EBF1:0.585241552797;GFI1B:0.565326342028;GTF2I:0.541531031536;IKZF2:0.53421471489;HIF1A:0.498651914967;RXR{A,B,G}:0.481661154553;MYFfamily:0.478218239202;CREB1:0.446310108638;HOX{A5,B5}:0.438246883453;FOXP1:0.434848741982;TEF:0.39912738623;NFKB1_REL_RELA:0.394115200936;FOS_FOS{B,L1}_JUN{B,D}:0.377538013832;FOXP3:0.363478126918;BREu{core}:0.351427973533;TFAP4:0.328399844829;ATF5_CREB3:0.326550659559;IRF7:0.321292020465;ZFP161:0.314970224647;SREBF1,2:0.303351808301;ARID5B:0.274884736932;RFX2..5_RFXANK_RFXAP:0.222060709731;CDC5L:0.215061150706;FOSL2:0.214681817539;EN1,2:0.212507440805;HSF1,2:0.181637476629;PAX8:0.161515927951;HNF1A:0.154957626347;ZIC1..3:0.147934958959;POU6F1:0.135702650549;FOX{F1,F2,J1}:0.0689172509637;MZF1:0.0357407529209;PAX2:0.0240618459487;TBX4,5:0.0141012679673;DMAP1_NCOR{1,2}_SMARC:0.0045108392931;IRF1,2:0.00396544440915;TLX2:7.71493718108e-05;ZNF423:-0.00935286306566;ZNF148:-0.0250981721454;BACH2:-0.028726473086;PITX1..3:-0.0411143220165;ETS1,2:-0.0635668220022;NFE2L2:-0.109948605619;XCPE1{core}:-0.12605301181;GLI1..3:-0.131686973848;LHX3,4:-0.146099462051;NFY{A,B,C}:-0.165952315924;HAND1,2:-0.185472153318;REST:-0.186174490458;NKX3-2:-0.189058638905;GATA6:-0.190404315897;STAT5{A,B}:-0.193863215943;NR6A1:-0.195486116057;RBPJ:-0.196625435169;RFX1:-0.202270423427;FOXQ1:-0.203929517356;TP53:-0.212596628176;PAX5:-0.224877529232;CUX2:-0.2334303765;NR5A1,2:-0.238274370534;ZNF384:-0.24071085752;GFI1:-0.241951547535;NKX2-1,4:-0.245832007819;NKX2-3_NKX2-5:-0.266064234375;NANOG{mouse}:-0.27562792186;SMAD1..7,9:-0.275758063448;NKX6-1,2:-0.278760318081;PAX1,9:-0.286993976224;ELF1,2,4:-0.299502496658;BPTF:-0.329133559674;ESR1:-0.351986941069;HMGA1,2:-0.364482657456;SOX17:-0.397043008519;SPIB:-0.398282427084;PAX3,7:-0.416030183367;SPI1:-0.418812136293;ZNF143:-0.422480768724;ZBTB6:-0.426950562412;FOX{I1,J2}:-0.454582833277;GATA4:-0.461415561194;OCT4_SOX2{dimer}:-0.465734070246;HES1:-0.511211426723;NRF1:-0.535418132754;PPARG:-0.538012933415;RREB1:-0.541994900765;RUNX1..3:-0.552014442429;SOX2:-0.560944223964;AHR_ARNT_ARNT2:-0.564848362672;PAX4:-0.579058611273;HOX{A6,A7,B6,B7}:-0.580297704517;CRX:-0.583833544249;YY1:-0.597515108451;PRDM1:-0.618045759237;LEF1_TCF7_TCF7L1,2:-0.638384412129;POU2F1..3:-0.654429322615;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.664075563976;ALX4:-0.671404830585;PBX1:-0.694424596882;TAL1_TCF{3,4,12}:-0.724232871768;TFDP1:-0.732238291799;SOX{8,9,10}:-0.791599508317;POU5F1:-0.802823524212;T:-0.825232517835;KLF4:-0.841689501331;NKX2-2,8:-0.864466544929;SNAI1..3:-0.887411326673;MYB:-0.900539735882;RXRA_VDR{dimer}:-0.953250005707;ZEB1:-0.960526677736;E2F1..5:-0.981876000096;VSX1,2:-1.03681532921;FOXM1:-1.04062918607;LMO2:-1.07157165992;ALX1:-1.11225762284;UFEwm:-1.16110217368;POU3F1..4:-1.23646581334;ELK1,4_GABP{A,B1}:-1.25800684357;POU1F1:-1.28069471057;EVI1:-1.33425643684;ONECUT1,2:-1.34778211244;MYOD1:-1.42171794445;TOPORS:-1.46751146478;NKX3-1:-1.56175641855;CDX1,2,4:-1.59074568581;ZBTB16:-1.60808913421;AIRE:-1.86411841281 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12231-129F8;search_select_hide=table117:FF:12231-129F8 | |||
}} | }} | ||
Latest revision as of 18:35, 4 June 2020
| Name: | mature adipocyte, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12558 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12558
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12558
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0947 |
| 10 | 10 | 0.15 |
| 100 | 100 | 0.668 |
| 101 | 101 | 0.779 |
| 102 | 102 | 0.227 |
| 103 | 103 | 0.11 |
| 104 | 104 | 0.997 |
| 105 | 105 | 0.654 |
| 106 | 106 | 0.915 |
| 107 | 107 | 0.936 |
| 108 | 108 | 0.432 |
| 109 | 109 | 0.0495 |
| 11 | 11 | 0.107 |
| 110 | 110 | 0.0906 |
| 111 | 111 | 0.0526 |
| 112 | 112 | 0.269 |
| 113 | 113 | 0.556 |
| 114 | 114 | 0.00163 |
| 115 | 115 | 0.0922 |
| 116 | 116 | 0.0503 |
| 117 | 117 | 0.00923 |
| 118 | 118 | 0.126 |
| 119 | 119 | 0.715 |
| 12 | 12 | 0.299 |
| 120 | 120 | 0.0404 |
| 121 | 121 | 0.714 |
| 122 | 122 | 0.865 |
| 123 | 123 | 0.253 |
| 124 | 124 | 0.327 |
| 125 | 125 | 0.0718 |
| 126 | 126 | 0.802 |
| 127 | 127 | 0.129 |
| 128 | 128 | 0.958 |
| 129 | 129 | 0.995 |
| 13 | 13 | 0.424 |
| 130 | 130 | 0.476 |
| 131 | 131 | 0.588 |
| 132 | 132 | 0.268 |
| 133 | 133 | 0.377 |
| 134 | 134 | 0.339 |
| 135 | 135 | 0.488 |
| 136 | 136 | 0.166 |
| 137 | 137 | 0.904 |
| 138 | 138 | 0.105 |
| 139 | 139 | 0.56 |
| 14 | 14 | 0.891 |
| 140 | 140 | 1.56862e-4 |
| 141 | 141 | 0.246 |
| 142 | 142 | 0.77 |
| 143 | 143 | 0.0195 |
| 144 | 144 | 0.847 |
| 145 | 145 | 0.373 |
| 146 | 146 | 0.452 |
| 147 | 147 | 0.598 |
| 148 | 148 | 0.0217 |
| 149 | 149 | 0.32 |
| 15 | 15 | 0.298 |
| 150 | 150 | 0.595 |
| 151 | 151 | 0.462 |
| 152 | 152 | 0.533 |
| 153 | 153 | 0.0695 |
| 154 | 154 | 0.495 |
| 155 | 155 | 0.271 |
| 156 | 156 | 0.287 |
| 157 | 157 | 0.927 |
| 158 | 158 | 0.506 |
| 159 | 159 | 0.316 |
| 16 | 16 | 0.0526 |
| 160 | 160 | 0.282 |
| 161 | 161 | 0.0915 |
| 162 | 162 | 0.554 |
| 163 | 163 | 0.589 |
| 164 | 164 | 0.203 |
| 165 | 165 | 0.621 |
| 166 | 166 | 0.662 |
| 167 | 167 | 0.568 |
| 168 | 168 | 0.781 |
| 169 | 169 | 0.348 |
| 17 | 17 | 0.437 |
| 18 | 18 | 0.051 |
| 19 | 19 | 0.911 |
| 2 | 2 | 0.997 |
| 20 | 20 | 0.791 |
| 21 | 21 | 0.13 |
| 22 | 22 | 0.819 |
| 23 | 23 | 0.655 |
| 24 | 24 | 0.72 |
| 25 | 25 | 0.66 |
| 26 | 26 | 0.0819 |
| 27 | 27 | 0.303 |
| 28 | 28 | 0.729 |
| 29 | 29 | 0.0337 |
| 3 | 3 | 0.114 |
| 30 | 30 | 0.563 |
| 31 | 31 | 0.605 |
| 32 | 32 | 1.87908e-4 |
| 33 | 33 | 0.598 |
| 34 | 34 | 0.629 |
| 35 | 35 | 0.0842 |
| 36 | 36 | 0.169 |
| 37 | 37 | 0.222 |
| 38 | 38 | 0.456 |
| 39 | 39 | 0.092 |
| 4 | 4 | 0.18 |
| 40 | 40 | 0.332 |
| 41 | 41 | 0.929 |
| 42 | 42 | 0.404 |
| 43 | 43 | 0.312 |
| 44 | 44 | 0.00189 |
| 45 | 45 | 0.465 |
| 46 | 46 | 0.036 |
| 47 | 47 | 0.0457 |
| 48 | 48 | 0.0518 |
| 49 | 49 | 0.175 |
| 5 | 5 | 0.296 |
| 50 | 50 | 0.99 |
| 51 | 51 | 0.656 |
| 52 | 52 | 0.212 |
| 53 | 53 | 0.904 |
| 54 | 54 | 0.977 |
| 55 | 55 | 0.128 |
| 56 | 56 | 0.342 |
| 57 | 57 | 0.344 |
| 58 | 58 | 0.603 |
| 59 | 59 | 0.138 |
| 6 | 6 | 0.576 |
| 60 | 60 | 0.558 |
| 61 | 61 | 0.193 |
| 62 | 62 | 0.233 |
| 63 | 63 | 0.416 |
| 64 | 64 | 0.118 |
| 65 | 65 | 0.848 |
| 66 | 66 | 0.709 |
| 67 | 67 | 0.239 |
| 68 | 68 | 0.811 |
| 69 | 69 | 0.00232 |
| 7 | 7 | 0.66 |
| 70 | 70 | 0.00922 |
| 71 | 71 | 0.0153 |
| 72 | 72 | 0.938 |
| 73 | 73 | 0.519 |
| 74 | 74 | 0.731 |
| 75 | 75 | 0.0663 |
| 76 | 76 | 0.438 |
| 77 | 77 | 0.333 |
| 78 | 78 | 0.732 |
| 79 | 79 | 0.113 |
| 8 | 8 | 0.216 |
| 80 | 80 | 0.342 |
| 81 | 81 | 0.272 |
| 82 | 82 | 0.244 |
| 83 | 83 | 0.0561 |
| 84 | 84 | 0.879 |
| 85 | 85 | 0.932 |
| 86 | 86 | 0.44 |
| 87 | 87 | 0.259 |
| 88 | 88 | 0.811 |
| 89 | 89 | 0.136 |
| 9 | 9 | 0.662 |
| 90 | 90 | 0.755 |
| 91 | 91 | 0.422 |
| 92 | 92 | 0.924 |
| 93 | 93 | 0.489 |
| 94 | 94 | 0.0895 |
| 95 | 95 | 0.0692 |
| 96 | 96 | 0.981 |
| 97 | 97 | 0.346 |
| 98 | 98 | 0.442 |
| 99 | 99 | 0.512 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12558
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000266 human mature adipocyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000266 (human mature adipocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
