Personal tools

FFCP PHASE1:Mm9::chr2:26244854..26244884,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:26244854..26244884,+
|short_description=p1@Pmpca
|description=CAGE_peak_1_at_Pmpca_5end
|association_with_transcript=0bp_to_ENSMUST00000076431,ENSMUST00000114093,ENSMUST00000134871,ENSMUST00000135155,ENSMUST00000137686,NM_173180,uc008ivd.1,uc008ive.1_5end
|EntrezGene=66865
|EntrezGene=66865
|HGNC=
|HGNC=
|UniProt=Q9DC61,A2AIW9,A2AIW8
|UniProt=Q9DC61,A2AIW9,A2AIW8
|association_with_transcript=0bp_to_ENSMUST00000076431,ENSMUST00000114093,ENSMUST00000134871,ENSMUST00000135155,ENSMUST00000137686,NM_173180,uc008ivd.1,uc008ive.1_5end
|description=CAGE_peak_1_at_Pmpca_5end
|id=chr2:26244854..26244884,+
|ontology_enrichment_disease=
|phase1_expression=26.9050063136054,32.8036883180999,24.1149596876454,27.2217790176147,14.5259761684441,25.1818907867835,32.4721570427781,31.5060909197446,22.1038293778117,27.3855495796732,36.6406452002581,45.3903584683464,34.2401459862411,36.8039894183979,68.2875011722109,45.354459895321,51.0680171033547,41.3255436619291,34.5528372686462,46.2584720459853,47.2840693239948,42.2979452115771,42.8367654187854,51.3575677166835,42.4407169974265,29.860062133981,32.3071497119306,41.5859479083766,48.0759251224626,48.8938451734266,57.4282022597239,69.2183434070998,58.4311548205342,47.5445043046316,40.1503751454272,44.0521810200005,39.4046857586372,43.5272895966384,38.2854318816662,47.1171369576418,23.5292595212406,30.7370468231301,41.2683800076481,29.4598554062851,28.5882946039031,33.5890556455877,28.9484797408774,80.0152323916239,67.0042857340139,76.9942400334162,67.8934144883008,61.8136026769378,48.992520968859,32.6412963905105,35.9620365082436,62.7713023927711,50.4298854292212,59.8179627041833,40.4632921719196,39.6743234454025,31.691570175309,65.3969946893425,56.9148669511129,36.4459385498967,36.5880554149781,38.3659262070894,32.9560121570245,35.348084089583,37.9503981049028,34.9665380279079,35.1242685456808,50.5602242394732,56.3214779426615,42.626798126804,49.45626304541,49.6378144769411,48.450987639731,47.2443150915195,44.5458946443106,40.8847491963601,35.5886933613374,40.1103295328705,46.6235608332306,43.895483582471,41.7139216430692,48.9083451886288,35.5929201997757,39.8894814066143,50.6608233399001,56.0740975992349,24.0587525622393,57.6483997577529,76.1567893752681,65.3040861881759,84.470934268197,79.7487859033257,45.0826588622923,37.6651012897508,41.0461887272533,43.4607676647719,25.2109721400258,53.8971205140135,43.3168907501298,49.7746692207332,67.3287137544876,76.7680392389549,82.9060089824245,50.4692748358245,39.3585583143701,59.6737399040596,56.5562165257603,66.3734742720468,71.4908041493781,75.2105976357587,59.9702406392095,71.252957283926,49.6861885146091,55.5261530572461,63.6919597403909,73.927450425966,73.7610671657714,66.4279096795254,78.2845397116113,44.2099003487436,43.9838084308256,50.8359539865097,46.9675288063207,51.5916348654331,41.8061047070383,38.7957756058491,32.9400434029411,28.774846633846,35.807809959609,32.9872939956126,30.7526305948149,36.0175604010422,34.0143475260056,41.9251490956013,30.8321765289083,44.403231592046,45.1517937080582,50.578462975364,44.4753460619213,46.2663790755645,41.706373979764,43.0462100157095,41.2287588062807,39.5816157230694,53.0297262614792,36.4974734723891,37.6535405710851,36.3864915829774,33.9217644055229,41.0937556496157,33.9540525073107,42.1952645655206,48.4527099246132,49.4107981660253,48.3077948972507,71.2512657522126,68.247083454499,77.2466243667754,63.2108444012511,68.2771884163491,63.7123176224872,59.7612238008548,78.872380011488,73.0951043218481,80.3052067577785,77.1587081171748,87.7164519286159,86.9889925180727,89.5764470387487,92.6024289446565,31.7537822331832,25.9319623195797,43.2848605708775,55.5346189993443,45.2171091134696,44.3572043253438,41.1087201617478,47.7989953357322,46.0322550758882,51.360919050391,49.8255514621737,42.8217282282428,37.9516165288407,34.8173826072014,39.3827455980623,37.7504151634773,42.7953338751895,44.2093626624695,45.5202962287396,45.5851565312818,56.3538678365402,49.0799700107207,41.1179272795367,51.4095559796035,43.759683689986,47.0876372054931,61.0725051302948,58.8604471906988,62.8479569424756,64.9027461235606,65.4541453726966,62.2868051306045,58.8294352026658,60.776644257609,56.5269390954752,49.7714317789902,45.2357282702349,73.3078973212178,63.258010872036,57.681846888618,55.5427058143918,66.9334026559846,69.0680042059362,62.7176577772377,29.3757572364901,38.0877737658674,43.1857187571369,42.6060165295722,31.2138030223708,32.4962139437123,32.1358915196119,37.2705267408396,33.4186505505125,28.3474802750432,27.9045845150602,27.3651735575282,33.155516518252,30.810249477862,48.2532108605671,60.9174365876955,41.7999632066181,45.2536263939761,38.3715910070823,39.2659150083881,40.9837363441689,134.567004199931,48.5882657901035,49.5857205256731,45.6697603193534,46.5989156007476,44.3369361423964,41.0460969643807,47.3628520959626,43.8383786866968,43.8769433520641,35.6666661228206,39.6012837731069,41.4892856544705,31.111409236533,30.6844428728916,30.5313818181915,46.8566627779114,52.6042989118667,39.4184616689827,31.5973025382427,32.5881256820563,33.5956781118688,33.081569382453,30.3022771627013,31.2876390356458,42.1674434299995,31.9720184069379,34.7248397868864,43.2146625675145,45.6636153753123,40.2953625859394,37.4187892985197,45.1273108533239,36.8589806148751,56.0215506370863,65.2387348417115,54.6526742828656,44.3262080090473,30.9986155529982,41.4963576608477,41.1937277259305,38.0797777370005,35.2902934451882,37.018066251991,33.7474049659128,37.4207228947297,43.9604028761664,45.1874646782097,47.6572196221868,46.3393431974275,43.9254092556523,45.3842408083594,40.1660668168898,45.1913914340466,59.189578316937,41.4400151591287,44.9336022350336,41.7980668980371,41.3994826108648,43.6725127492355,40.9987613009855,45.7900144718361,44.236754195301,61.0486524204344,32.9309835936071,114.429666552891,51.5832083851727,48.6447961943867,53.2796256062691,47.9182945102382,44.942329380547,48.4685395606964,42.0560163045959,37.8542233376816,54.3564271858514,89.0012719336804,37.6053233547532,49.6676777460902,45.0901101953592,39.7557718312053,40.2810065251833,40.530996375378,42.7895800291089,42.6822733534528,47.2522985757331,44.8858091197949,45.8759142372624,41.1272256721755,41.467303746982,44.8807304377225,80.0358254161696,146.288743273509,141.568465729753,156.804231684049,37.8651604303093,42.4162394519671,34.7988086107804,43.3024125739713,42.1320567389705,41.7916363536629,34.9847179745454,36.6653128601214,37.979553297955,35.6242910280734,27.1941803060292,31.0510350106631,31.9728054289197,35.7982503097522,33.1366599521165,48.0535419314738,64.243004617566,42.000467015517,44.2454225064295,41.5034062003405,36.4010146731028,45.5605791993311,42.85529190569,42.3613356661196,35.3776096469316,44.1053981809017,44.7044429085001,44.0115085108447,40.7199969294969,41.3535376480416,44.7716069806089,64.3158008993948,46.8769405726803,38.7360746755108,43.5708803597816,43.5443950529478,43.659048315197,43.1569503804651,46.8015461556098,46.2077057839273,43.9149814957801,40.9758659235011,47.6156177702496,41.9634711783713,47.13595081925,41.5222563434609,53.487933929931,55.2461908279081,42.6076313261406,37.8096957523037,39.7198818921334,45.3827320384092,45.7675345122875,53.5607329792761,63.5303287064205,55.4164127132807
|phase1_expression=26.9050063136054,32.8036883180999,24.1149596876454,27.2217790176147,14.5259761684441,25.1818907867835,32.4721570427781,31.5060909197446,22.1038293778117,27.3855495796732,36.6406452002581,45.3903584683464,34.2401459862411,36.8039894183979,68.2875011722109,45.354459895321,51.0680171033547,41.3255436619291,34.5528372686462,46.2584720459853,47.2840693239948,42.2979452115771,42.8367654187854,51.3575677166835,42.4407169974265,29.860062133981,32.3071497119306,41.5859479083766,48.0759251224626,48.8938451734266,57.4282022597239,69.2183434070998,58.4311548205342,47.5445043046316,40.1503751454272,44.0521810200005,39.4046857586372,43.5272895966384,38.2854318816662,47.1171369576418,23.5292595212406,30.7370468231301,41.2683800076481,29.4598554062851,28.5882946039031,33.5890556455877,28.9484797408774,80.0152323916239,67.0042857340139,76.9942400334162,67.8934144883008,61.8136026769378,48.992520968859,32.6412963905105,35.9620365082436,62.7713023927711,50.4298854292212,59.8179627041833,40.4632921719196,39.6743234454025,31.691570175309,65.3969946893425,56.9148669511129,36.4459385498967,36.5880554149781,38.3659262070894,32.9560121570245,35.348084089583,37.9503981049028,34.9665380279079,35.1242685456808,50.5602242394732,56.3214779426615,42.626798126804,49.45626304541,49.6378144769411,48.450987639731,47.2443150915195,44.5458946443106,40.8847491963601,35.5886933613374,40.1103295328705,46.6235608332306,43.895483582471,41.7139216430692,48.9083451886288,35.5929201997757,39.8894814066143,50.6608233399001,56.0740975992349,24.0587525622393,57.6483997577529,76.1567893752681,65.3040861881759,84.470934268197,79.7487859033257,45.0826588622923,37.6651012897508,41.0461887272533,43.4607676647719,25.2109721400258,53.8971205140135,43.3168907501298,49.7746692207332,67.3287137544876,76.7680392389549,82.9060089824245,50.4692748358245,39.3585583143701,59.6737399040596,56.5562165257603,66.3734742720468,71.4908041493781,75.2105976357587,59.9702406392095,71.252957283926,49.6861885146091,55.5261530572461,63.6919597403909,73.927450425966,73.7610671657714,66.4279096795254,78.2845397116113,44.2099003487436,43.9838084308256,50.8359539865097,46.9675288063207,51.5916348654331,41.8061047070383,38.7957756058491,32.9400434029411,28.774846633846,35.807809959609,32.9872939956126,30.7526305948149,36.0175604010422,34.0143475260056,41.9251490956013,30.8321765289083,44.403231592046,45.1517937080582,50.578462975364,44.4753460619213,46.2663790755645,41.706373979764,43.0462100157095,41.2287588062807,39.5816157230694,53.0297262614792,36.4974734723891,37.6535405710851,36.3864915829774,33.9217644055229,41.0937556496157,33.9540525073107,42.1952645655206,48.4527099246132,49.4107981660253,48.3077948972507,71.2512657522126,68.247083454499,77.2466243667754,63.2108444012511,68.2771884163491,63.7123176224872,59.7612238008548,78.872380011488,73.0951043218481,80.3052067577785,77.1587081171748,87.7164519286159,86.9889925180727,89.5764470387487,92.6024289446565,31.7537822331832,25.9319623195797,43.2848605708775,55.5346189993443,45.2171091134696,44.3572043253438,41.1087201617478,47.7989953357322,46.0322550758882,51.360919050391,49.8255514621737,42.8217282282428,37.9516165288407,34.8173826072014,39.3827455980623,37.7504151634773,42.7953338751895,44.2093626624695,45.5202962287396,45.5851565312818,56.3538678365402,49.0799700107207,41.1179272795367,51.4095559796035,43.759683689986,47.0876372054931,61.0725051302948,58.8604471906988,62.8479569424756,64.9027461235606,65.4541453726966,62.2868051306045,58.8294352026658,60.776644257609,56.5269390954752,49.7714317789902,45.2357282702349,73.3078973212178,63.258010872036,57.681846888618,55.5427058143918,66.9334026559846,69.0680042059362,62.7176577772377,29.3757572364901,38.0877737658674,43.1857187571369,42.6060165295722,31.2138030223708,32.4962139437123,32.1358915196119,37.2705267408396,33.4186505505125,28.3474802750432,27.9045845150602,27.3651735575282,33.155516518252,30.810249477862,48.2532108605671,60.9174365876955,41.7999632066181,45.2536263939761,38.3715910070823,39.2659150083881,40.9837363441689,134.567004199931,48.5882657901035,49.5857205256731,45.6697603193534,46.5989156007476,44.3369361423964,41.0460969643807,47.3628520959626,43.8383786866968,43.8769433520641,35.6666661228206,39.6012837731069,41.4892856544705,31.111409236533,30.6844428728916,30.5313818181915,46.8566627779114,52.6042989118667,39.4184616689827,31.5973025382427,32.5881256820563,33.5956781118688,33.081569382453,30.3022771627013,31.2876390356458,42.1674434299995,31.9720184069379,34.7248397868864,43.2146625675145,45.6636153753123,40.2953625859394,37.4187892985197,45.1273108533239,36.8589806148751,56.0215506370863,65.2387348417115,54.6526742828656,44.3262080090473,30.9986155529982,41.4963576608477,41.1937277259305,38.0797777370005,35.2902934451882,37.018066251991,33.7474049659128,37.4207228947297,43.9604028761664,45.1874646782097,47.6572196221868,46.3393431974275,43.9254092556523,45.3842408083594,40.1660668168898,45.1913914340466,59.189578316937,41.4400151591287,44.9336022350336,41.7980668980371,41.3994826108648,43.6725127492355,40.9987613009855,45.7900144718361,44.236754195301,61.0486524204344,32.9309835936071,114.429666552891,51.5832083851727,48.6447961943867,53.2796256062691,47.9182945102382,44.942329380547,48.4685395606964,42.0560163045959,37.8542233376816,54.3564271858514,89.0012719336804,37.6053233547532,49.6676777460902,45.0901101953592,39.7557718312053,40.2810065251833,40.530996375378,42.7895800291089,42.6822733534528,47.2522985757331,44.8858091197949,45.8759142372624,41.1272256721755,41.467303746982,44.8807304377225,80.0358254161696,146.288743273509,141.568465729753,156.804231684049,37.8651604303093,42.4162394519671,34.7988086107804,43.3024125739713,42.1320567389705,41.7916363536629,34.9847179745454,36.6653128601214,37.979553297955,35.6242910280734,27.1941803060292,31.0510350106631,31.9728054289197,35.7982503097522,33.1366599521165,48.0535419314738,64.243004617566,42.000467015517,44.2454225064295,41.5034062003405,36.4010146731028,45.5605791993311,42.85529190569,42.3613356661196,35.3776096469316,44.1053981809017,44.7044429085001,44.0115085108447,40.7199969294969,41.3535376480416,44.7716069806089,64.3158008993948,46.8769405726803,38.7360746755108,43.5708803597816,43.5443950529478,43.659048315197,43.1569503804651,46.8015461556098,46.2077057839273,43.9149814957801,40.9758659235011,47.6156177702496,41.9634711783713,47.13595081925,41.5222563434609,53.487933929931,55.2461908279081,42.6076313261406,37.8096957523037,39.7198818921334,45.3827320384092,45.7675345122875,53.5607329792761,63.5303287064205,55.4164127132807
|short_description=p1@Pmpca
}}
}}

Revision as of 09:48, 18 April 2012

Short description:p1@Pmpca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pmpca_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000076431, ENSMUST00000114093, ENSMUST00000134871, ENSMUST00000135155, ENSMUST00000137686, NM_173180, uc008ivd.1, uc008ive.1_5end
EntrezGene:Pmpca
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pmpca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I532.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E636.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F145.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E836.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A168.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A345.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A551.07
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A646.26
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A347.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H242.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I942.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D151.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D242.44
GP2+ M cell, pool1.CNhs13228.11845-124H929.86
GP2+ M cell, pool2.CNhs13231.11846-124I132.31
GP2+ M cell, pool3.CNhs13240.11847-124I241.59
Ileum epithelium, pool1.CNhs13199.10252-104B948.08
Ileum epithelium, pool2.CNhs13232.10253-104C148.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C857.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I369.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G658.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F540.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F644.05
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F739.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H138.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H347.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G923.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H441.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C280.02
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B867.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C376.99
Mouse Astrocytes, donor2.CNhs12078.11552-120C467.89
Mouse Astrocytes, donor3.CNhs12107.11633-122C461.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A248.99
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I932.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.96
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C162.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E150.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C559.82
Mouse Granule cells, donor1.CNhs12131.11713-123C340.46
Mouse Granule cells, donor2.CNhs12357.11731-123E339.67
Mouse Granule cells, donor3.CNhs12108.11636-122C731.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C665.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D156.91
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C736.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E736.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D238.37
Mouse Microglia, donor1.CNhs12629.11718-123C832.96
Mouse Microglia, donor2.CNhs12634.11736-123E835.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F150.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D556.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D242.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F249.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D649.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E446.62
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.59
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.89
Mouse Schwann, donor1.CNhs12507.11728-123D950.66
Mouse Schwann, donor2.CNhs12573.11746-123F956.07
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F757.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C476.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C865.30
Mouse hepatocyte, donor6.CNhs13090.11822-124F484.47
Mouse hepatocyte, donor8.CNhs13091.11824-124F679.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I737.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E341.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I843.46
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H153.90
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G167.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G276.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G382.91
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B650.47
accessory axillary lymph node, adult.CNhs10475.1063-29H939.36
adrenal gland, adult.CNhs10508.49-24D759.67
adrenal gland, embryo E14.CNhs11038.406-44C556.56
adrenal gland, embryo E16.CNhs11004.1254-43D666.37
adrenal gland, embryo E17.CNhs11043.1263-45I171.49
adrenal gland, embryo E18.CNhs11026.1262-18F575.21
adrenal gland, neonate N00.CNhs11191.1311-23C159.97
adrenal gland, neonate N25.CNhs11223.1377-27I371.25
amnion, adult pregnant day17.5.CNhs10488.583-22A849.69
aorta, adult.CNhs10498.46-23H155.53
bone (os femoris), adult.CNhs10483.56-12G263.69
bone (os femoris), neonate N02.CNhs11227.1985-43F573.93
bone (os femoris), neonate N16.CNhs11225.1525-43A673.76
bone (os femoris), neonate N20.CNhs11195.1350-25C366.43
cecum, adult.CNhs10467.37-13H478.28
cerebellum, adult.CNhs10494.15-8B244.21
cerebellum, neonate N30.CNhs11135.1395-42I243.98
colon, adult.CNhs10468.36-18H750.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C746.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D151.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D441.81
corpora quadrigemina, adult.CNhs10501.16-22A438.80
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F128.77
cortex, adult.CNhs10473.12-14D535.81
cortex, neonate N30.CNhs11107.1392-42F232.99
diencephalon, adult.CNhs10482.20-12F230.75
diencephalon, neonate N30.CNhs11201.1388-42B236.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B134.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A241.93
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G444.40
eyeball, embryo E12.CNhs11016.345-16C645.15
eyeball, embryo E14.CNhs10521.399-16E250.58
eyeball, embryo E15.CNhs10593.426-16C944.48
eyeball, embryo E17.CNhs11023.1261-18D446.27
eyeball, neonate N00.CNhs11207.633-15C641.71
eyeball, neonate N01.CNhs11140.1532-43E743.05
eyeball, neonate N02.CNhs11205.1551-44G841.23
eyeball, neonate N16.CNhs11188.777-19A239.58
forelimb, embryo E11.CNhs10596.335-25E253.03
forelimb, embryo E12.CNhs10600.359-14H236.50
forelimb, embryo E13.CNhs10589.384-1E237.65
forelimb, embryo E14.CNhs10577.413-26A836.39
forelimb, embryo E15.CNhs11007.437-20E733.92
forelimb, embryo E17.CNhs10598.1517-43C441.09
forelimb, embryo E18.CNhs11008.1520-43B533.95
gonad, embryo E13.CNhs11044.1564-45I642.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C848.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D249.41
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D548.31
heart, embryo E11.CNhs10586.331-24E971.25
heart, embryo E12.CNhs11015.353-12F568.25
heart, embryo E13.CNhs11013.376-3I977.25
heart, embryo E14.CNhs10597.403-26D463.21
heart, embryo E15.CNhs11017.431-16C868.28
heart, embryo E16.CNhs11021.457-17C663.71
heart, embryo E17.CNhs11025.479-18E559.76
heart, embryo E18.CNhs11030.1283-20G378.87
heart, neonate N00.CNhs11213.639-21E373.10
heart, neonate N03.CNhs11221.1349-25I280.31
heart, neonate N10.CNhs11118.749-24G177.16
heart, neonate N16.CNhs11209.782-15G187.72
heart, neonate N20.CNhs11127.821-26I686.99
heart, neonate N25.CNhs11196.1351-25D389.58
heart, neonate N30.CNhs11202.1390-42D292.60
hippocampus, adult.CNhs10478.13-16E831.75
hippocampus, neonate N00.CNhs11228.627-43G125.93
intestinal mucosa, adult.CNhs10506.860-29I343.28
intestine, adult.CNhs10496.178-9A355.53
intestine, embryo E12.CNhs11019.1251-16I545.22
intestine, embryo E13.CNhs11010.381-16D544.36
intestine, embryo E15.CNhs10602.976-16D841.11
intestine, embryo E16.CNhs10585.463-22H447.80
intestine, embryo E17.CNhs10582.482-18D346.03
intestine, embryo E18.CNhs10526.1289-20F751.36
intestine, neonate N00.CNhs11126.644-26D149.83
intestine, neonate N01.CNhs11192.1322-23E942.82
intestine, neonate N06.CNhs11102.688-20B837.95
intestine, neonate N07.CNhs11095.720-20F234.82
intestine, neonate N10.CNhs11098.755-23A539.38
intestine, neonate N20.CNhs11187.827-18D137.75
intestine, neonate N25.CNhs11121.1352-25E342.80
intestine, neonate N30.CNhs11131.1384-42G144.21
kidney, embryo E14.CNhs10606.411-4I945.52
kidney, embryo E15.CNhs10997.434-16F845.59
kidney, embryo E16.CNhs10584.464-22A556.35
kidney, embryo E17.CNhs11028.483-18I249.08
kidney, embryo E18.CNhs11001.1288-20C741.12
kidney, neonate N00.CNhs11214.646-21G751.41
kidney, neonate N10.CNhs11206.758-6D543.76
kidney, neonate N20.CNhs11113.832-19I147.09
kidney, neonate N25.CNhs11122.1353-25F361.07
kidney, neonate N30.CNhs11203.1385-42H158.86
liver, adult pregnant day01.CNhs10466.508-5B262.85
liver, embryo E12.CNhs10601.355-15F864.90
liver, embryo E13.CNhs10524.378-3H665.45
liver, embryo E14.CNhs10594.409-16E162.29
liver, embryo E15.CNhs10520.433-16D758.83
liver, embryo E16.CNhs10523.462-17F560.78
liver, embryo E17.CNhs10510.481-18A356.53
liver, embryo E18.CNhs10579.499-43G449.77
liver, neonate N00.CNhs11117.641-24F445.24
liver, neonate N03.CNhs11123.1345-25G273.31
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H257.68
liver, neonate N10.CNhs11115.751-24B955.54
liver, neonate N20.CNhs11220.823-25A366.93
liver, neonate N25.CNhs11198.1368-26H169.07
liver, neonate N30.CNhs11106.1382-42D162.72
lung, adult.CNhs10474.28-22B129.38
lung, embryo E12.CNhs10522.354-16G238.09
lung, embryo E14.CNhs10604.404-26F843.19
lung, embryo E15.CNhs11020.432-17C542.61
lung, embryo E16.CNhs10998.458-17B631.21
lung, embryo E17.CNhs10605.480-44A632.50
lung, embryo E18.CNhs10583.1287-20I632.14
lung, neonate N00.CNhs11224.640-42C637.27
lung, neonate N06.CNhs11212.683-20E533.42
lung, neonate N07.CNhs11111.715-19A328.35
lung, neonate N10.CNhs11219.750-23E627.90
lung, neonate N20.CNhs11109.822-18A427.37
lung, neonate N25.CNhs11119.1359-25C733.16
lung, neonate N30.CNhs11133.1394-42H230.81
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A148.25
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A160.92
mammary gland, adult lactating day02.CNhs10480.595-22B641.80
mammary gland, adult pregnant day19.CNhs10476.588-5H245.25
medulla oblongata, adult.CNhs10477.17-12C238.37
medulla oblongata, neonate N30.CNhs11200.1396-42A339.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2134.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E148.59
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E249.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E345.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D746.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D844.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D941.05
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D447.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D543.84
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.88
olfactory brain, adult.CNhs10489.18-22I935.67
ovary, adult.CNhs10507.91-2I739.60
ovary, embryo E18.CNhs11040.505-44H741.49
ovary, neonate N00.CNhs11217.1299-22I431.11
oviduct, adult pregnant day01.CNhs10500.988-6G630.68
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F446.86
pancreas, embryo E15.CNhs11042.1556-45F252.60
pancreas, embryo E16.CNhs11003.460-26E539.42
pancreas, embryo E17.CNhs10599.1558-45G331.60
pancreas, embryo E18.CNhs10580.1535-43I732.59
pancreas, neonate N00.CNhs11105.645-26G933.60
pancreas, neonate N01.CNhs11138.1531-43D733.08
pancreas, neonate N02.CNhs11139.1539-43D830.30
pancreas, neonate N16.CNhs11136.787-43B631.29
pancreas, neonate N25.CNhs11094.1555-45E242.17
pancreas, neonate N30.CNhs11182.1548-44H531.97
pituitary gland, adult.CNhs10493.21-1G834.72
pituitary gland, embryo E12.CNhs11018.346-16E643.21
pituitary gland, embryo E13.CNhs11009.370-44C745.66
pituitary gland, embryo E14.CNhs11037.398-44A540.30
pituitary gland, embryo E15.CNhs10592.427-16B937.42
pituitary gland, embryo E16.CNhs11036.449-43F645.13
pituitary gland, embryo E17.CNhs11039.1265-44F536.86
pituitary gland, neonate N00.CNhs11190.1308-22E956.02
placenta, adult pregnant day10.CNhs10472.539-13I765.24
placenta, adult pregnant day17.CNhs10464.577-18G354.65
prostate, adult.CNhs10470.859-1F844.33
skin, adult.CNhs10492.30-1C331.00
skin, neonate N00.CNhs11124.650-25G441.50
skin, neonate N03.CNhs11215.662-22H341.19
skin, neonate N06.CNhs11097.693-20I538.08
skin, neonate N10.CNhs11108.762-6C435.29
small intestine, neonate N16.CNhs11114.790-21I137.02
spinal cord, adult.CNhs10505.24-13C933.75
spleen, adult.CNhs10465.25-2G237.42
spleen, embryo E16.CNhs11035.461-43C143.96
spleen, embryo E18.CNhs11011.1271-21F245.19
spleen, neonate N10.CNhs11116.752-24D147.66
spleen, neonate N20.CNhs11112.824-19H146.34
spleen, neonate N25.CNhs11099.1354-25G343.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C645.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C940.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.19
stomach, adult.CNhs10503.33-1H659.19
stomach, embryo E12.CNhs10588.356-43E341.44
stomach, embryo E15.CNhs10603.1252-16G844.93
stomach, embryo E16.CNhs11022.459-17D441.80
stomach, embryo E17.CNhs11006.1035-18D541.40
stomach, embryo E18.CNhs10999.1286-20C643.67
stomach, neonate N03.CNhs11193.1340-24B841.00
stomach, neonate N07.CNhs11210.718-18A945.79
stomach, neonate N25.CNhs11104.1355-25E444.24
stomach, neonate N30.CNhs11134.1386-42I161.05
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G5114.43
testis, embryo E13.CNhs11031.389-23F551.58
testis, embryo E15.CNhs11034.443-27C548.64
testis, embryo E16.CNhs11033.470-26G553.28
testis, embryo E17.CNhs11029.486-18I547.92
testis, embryo E18.CNhs11027.503-18G544.94
testis, neonate N00.CNhs11189.1300-22B748.47
testis, neonate N07.CNhs11222.726-26I442.06
testis, neonate N10.CNhs11204.763-44D937.85
testis, neonate N20.CNhs11110.839-18H354.36
testis, neonate N30.CNhs11130.1391-42E289.00
thymus, adult.CNhs10471.38-12B537.61
thymus, embryo E14.CNhs11041.402-44I449.67
thymus, embryo E15.CNhs11005.430-45I245.09
thymus, embryo E16.CNhs11002.456-26C539.76
thymus, embryo E17.CNhs10581.478-18C140.28
thymus, embryo E18.CNhs10595.1273-19G440.53
thymus, neonate N02.CNhs11181.1541-43F842.79
thymus, neonate N03.CNhs11137.2104-43C742.68
thymus, neonate N06.CNhs11197.681-26C447.25
thymus, neonate N07.CNhs11211.713-19D344.89
thymus, neonate N10.CNhs11194.748-24E445.88
thymus, neonate N20.CNhs11186.820-7A241.13
thymus, neonate N25.CNhs11125.1362-25G741.47
thymus, neonate N30.CNhs11132.1393-42G244.88
tongue, adult.CNhs10499.32-1B480.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3146.29
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7141.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5156.80
urinary bladder, adult.CNhs10481.879-12E437.87
uterus, adult pregnant day19.CNhs10497.590-15F542.42
uterus, adult.CNhs10509.92-27E534.80
vagina, adult.CNhs10502.89-27D543.30
vesicular gland, adult.CNhs10491.51-27F842.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I848.05
whole body, embryo E12.CNhs10587.857-27C964.24
whole body, embryo E13.CNhs10512.372-23H242.00
whole body, embryo E14.5.CNhs10578.420-27D244.25
whole body, embryo E14.CNhs10519.395-14B141.50
whole body, embryo E16.CNhs10514.453-14F236.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G545.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G542.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G542.36
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G535.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G544.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G544.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G544.01
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G540.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G541.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G544.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G564.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G546.88
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G543.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G543.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G543.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G543.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G546.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G546.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G543.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G547.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G541.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G547.14
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G553.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G555.25
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G542.61
whole body, embryo E17.5.CNhs10513.490-9F937.81
whole body, embryo E17.CNhs10517.475-3I539.72
whole body, embryo E18.CNhs10516.493-3B345.38
whole body, neonate N00.CNhs10525.657-19C245.77
whole body, neonate N01.CNhs10576.659-23C653.56
whole body, neonate N06.CNhs10515.692-21D163.53
whole body, neonate N10.CNhs10518.761-6B455.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:26244854..26244884,%2B&oldid=862465"