FFCP PHASE1:Mm9::chr17:57497995..57498014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13733 | |EntrezGene=13733 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q61549,Q3U9R0,O08745,Q3U1M9,O08744,O08743 | |UniProt=Q61549,Q3U9R0,O08745,Q3U1M9,O08744,O08743 | ||
|association_with_transcript=-94bp_to_ENSMUST00000086763,NM_010130,uc008des.2,uc008det.2,uc008deu.2,uc008dev.2,uc012awa.1,uc012awb.1_5end | |association_with_transcript=-94bp_to_ENSMUST00000086763,NM_010130,uc008des.2,uc008det.2,uc008deu.2,uc008dev.2,uc012awa.1,uc012awb.1_5end | ||
|cluster_id=chr17:57497995..57498014,+ | |||
|description=CAGE_peak_2_at_Emr1_5end | |description=CAGE_peak_2_at_Emr1_5end | ||
|id=chr17:57497995..57498014,+ | |id=chr17:57497995..57498014,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.51e-19,3;CL:0002540,4.51e-19,3;CL:0002476,1.38e-13,2;CL:0002194,3.21e-07,4;CL:0000766,3.21e-07,4;CL:0000234,3.21e-07,4;CL:0000576,3.21e-07,4;CL:0000235,3.21e-07,4;CL:0000864,3.21e-07,4;CL:0002009,3.21e-07,4;CL:0000040,3.21e-07,4;CL:0000559,3.21e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.95e-08!193;UBERON:0004120!6.95e-08!193;UBERON:0006603!6.95e-08!193;UBERON:0005177!4.32e-07!85 | |ontology_enrichment_uberon=UBERON:0000926!6.95e-08!193;UBERON:0004120!6.95e-08!193;UBERON:0006603!6.95e-08!193;UBERON:0005177!4.32e-07!85 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-09,16;UBERON:0002365,5.53e-08,25;UBERON:0002330,5.53e-08,25;UBERON:0001044,5.53e-07,1;UBERON:0001736,5.53e-07,1;UBERON:0003293,5.53e-07,1;UBERON:0003294,5.53e-07,1;UBERON:0001829,5.53e-07,1;UBERON:0010047,5.53e-07,1;UBERON:0000167,5.53e-07,1;UBERON:0006298,5.53e-07,1;UBERON:0001474,5.61e-07,22;UBERON:0004765,5.61e-07,22;UBERON:0001434,5.61e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.473193248037357,0,0,0.0850432901510698,0.496454756004426,1.82839852397255,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5995988691256,2.96659908770092,4.9733608046227,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0.292399974850665,1.3173006917463,0.402619256281115,0,0.102904612379284,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.442830443938806,0.31399745568275,0.246794327843601,1.48226313543574,0,0.196558995113203,0.899448449539415,0.405720242777006,1.20588579876208,0.25462585178142,0.863088412352432,0.648540907100142,1.09824565275233,1.43768206527355,1.48856379067401,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,25.6345182696763,43.5124547054968,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0.485561272309963,0,0,0,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0,0.582961673259701,0,0.854354403989263,0,0.185194527369712,0.565105371014073,0.410082683163076,1.37266903923914,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.481059208201647,0.116876902181569,0,0,0,0,0.386379188064381,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.473193248037357,0,0,0.0850432901510698,0.496454756004426,1.82839852397255,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5995988691256,2.96659908770092,4.9733608046227,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0.292399974850665,1.3173006917463,0.402619256281115,0,0.102904612379284,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.442830443938806,0.31399745568275,0.246794327843601,1.48226313543574,0,0.196558995113203,0.899448449539415,0.405720242777006,1.20588579876208,0.25462585178142,0.863088412352432,0.648540907100142,1.09824565275233,1.43768206527355,1.48856379067401,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,25.6345182696763,43.5124547054968,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0.485561272309963,0,0,0,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0,0.582961673259701,0,0.854354403989263,0,0.185194527369712,0.565105371014073,0.410082683163076,1.37266903923914,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.481059208201647,0.116876902181569,0,0,0,0,0.386379188064381,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,0 | ||
|short_description=p2@Emr1 | |short_description=p2@Emr1 | ||
}} | }} |
Latest revision as of 18:06, 26 September 2015
Short description: | p2@Emr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Emr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | -94bp_to_ENSMUST00000086763, NM_010130, uc008des.2, uc008det.2, uc008deu.2, uc008dev.2, uc012awa.1, uc012awb.1_5end |
EntrezGene: | Emr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.51e-19 | 3 |
mesenchymal stem cell of the bone marrow | 4.51e-19 | 3 |
bone marrow macrophage | 1.38e-13 | 2 |
monopoietic cell | 3.21e-07 | 4 |
myeloid leukocyte | 3.21e-07 | 4 |
phagocyte | 3.21e-07 | 4 |
monocyte | 3.21e-07 | 4 |
macrophage | 3.21e-07 | 4 |
tissue-resident macrophage | 3.21e-07 | 4 |
macrophage dendritic cell progenitor | 3.21e-07 | 4 |
monoblast | 3.21e-07 | 4 |
promonocyte | 3.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-09 | 16 |
exocrine gland | 5.53e-08 | 25 |
exocrine system | 5.53e-08 | 25 |
saliva-secreting gland | 5.53e-07 | 1 |
submandibular gland | 5.53e-07 | 1 |
gland of oral region | 5.53e-07 | 1 |
gland of foregut | 5.53e-07 | 1 |
major salivary gland | 5.53e-07 | 1 |
oral gland | 5.53e-07 | 1 |
oral cavity | 5.53e-07 | 1 |
submandibular gland primordium | 5.53e-07 | 1 |
bone element | 5.61e-07 | 22 |
skeletal element | 5.61e-07 | 22 |
skeletal system | 5.61e-07 | 22 |