Personal tools

FFCP PHASE1:Mm9::chr17:5841394..5841410,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66616
|EntrezGene=66616
|HGNC=
|HGNC=
|MCL_coexpression_id=1505
|TSSclassifier=NA
|UniProt=Q3U1P2,Q91VH2
|UniProt=Q3U1P2,Q91VH2
|association_with_transcript=14bp_to_NM_025664,uc008afj.1_5end
|association_with_transcript=14bp_to_NM_025664,uc008afj.1_5end
|cluster_id=chr17:5841394..5841410,+
|description=CAGE_peak_4_at_Snx9_5end
|description=CAGE_peak_4_at_Snx9_5end
|id=chr17:5841394..5841410,+
|id=chr17:5841394..5841410,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!7.73e-09!15;UBERON:0004923!8.85e-08!24;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13;UBERON:0000160!1.24e-07!43;UBERON:0005409!3.39e-07!59
|ontology_enrichment_uberon=UBERON:0000344!7.73e-09!15;UBERON:0004923!8.85e-08!24;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13;UBERON:0000160!1.24e-07!43;UBERON:0005409!3.39e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.83e-14,31;UBERON:0005409,5.15e-11,47;UBERON:0000344,1.32e-09,15;UBERON:0001242,2.53e-08,13;UBERON:0001262,2.53e-08,13;UBERON:0004786,2.53e-08,13;UBERON:0004923,3.55e-08,24
|phase1_expression=0.640595388419176,12.2141392673776,8.18998630901165,11.7961042409664,8.01433167914156,3.86122325397347,4.43864017131499,0,3.23814060948833,2.34064526321993,2.39705155515707,0.957265907944037,0.171200729931206,0,0.666219523631325,1.01237633694913,0.699561878128147,3.15462165358238,3.15363197293199,6.36584477697045,1.78590909317247,1.58865521921416,1.56719873483361,5.27974995218242,4.35877634027623,7.46501553349526,6.46142994238612,5.60225204983311,6.84084310042946,6.04872311423834,6.43018480900384,0,2.46025915033828,0,1.73310971850765,1.99481574430191,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,2.64383317748712,3.75094645512204,0.917733760808408,0,3.2703773457067,1.31811709640683,2.91644848611425,1.81982348112971,2.87505128729943,5.36904339384756,0,0.336093799142464,1.54355661621568,2.0057340795713,4.12537673821954,0,0,0,2.37191172448392,3.55717918444456,5.39939830368839,3.9554654502679,4.2628806896766,1.19840044207362,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.14918604276669,0.614426133024974,0.263772575460388,0.548925861614458,0,0.837548997004143,0,0.61119299110724,0,0.142371680799103,0,0.908714319998209,1.058001841495,2.6087803983151,0.860423876981386,0.679971333707751,1.07940638327563,3.89865850468601,0.448026887097336,1.40444420131752,1.02258193546835,1.81850203222008,3.5333957451034,1.12674735821344,0,2.54805239706646,0,0.649473123033642,0.760079596425296,3.0331466700887,1.7127581957859,2.58937883647172,1.1875371125186,0.520455980298408,0,0.922461989024234,0.452167921657868,0.940709657085638,0.628332956648377,4.20231445148436,3.32578520915797,2.65383165584962,0.970601099684455,1.10420759230197,0.969750506270444,1.86391761218122,1.17112318804619,1.46612694769419,4.59822699375465,0.958520996047362,2.99951365496704,0.762421362438388,0.898743836428936,0,0.125654352112864,0.521472960576829,1.27857728665165,0.83115217823824,1.1356888414743,1.62942982160506,2.11491850037158,1.76905930903572,1.05220927943237,0.520481771850815,0.919608417733892,0.900310649026746,1.05493372485001,1.2246569847239,1.15302348256365,0.937017245597288,1.03481348295606,1.07783996466421,1.70195472151037,0.351902248327898,0.876782929710299,0.556094498451196,1.74126083261083,2.26360350048738,0.398068533636986,0.702213187313235,0.772043721344145,0.284163499395593,1.24275463521301,0.938104239924385,0.900310307305074,3.31442629819294,0.590292695242212,0.617068451549513,1.16266972375204,1.07309360559848,1.98501082024188,1.15191894939436,0.820837320395476,1.62137619091711,1.60819986167866,1.3173006917463,1.74468344388483,0.841159794256509,0.308713837137853,7.59963200862735,3.70230793328962,1.2797295032114,0.928946687441754,1.41754207454303,2.01683524623343,2.66853652613844,2.85338439168839,6.64340686162316,3.95277491337626,2.76468729680296,3.97912944082302,3.11942539390592,3.59527763461689,2.59365659849633,5.37681437786791,0.569003702859245,0.456994050438915,0,0.814605311381257,1.16371492300575,1.33258057791605,2.15004226222475,2.50937251565324,1.56998727841375,3.33172342588861,1.1858105083486,0.83422552858047,1.17935397067922,1.34917267430912,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,3.34926852901653,1.5601883655728,2.52578877947112,1.79397413521912,3.85954817090694,1.84753190166605,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,0.714130922658041,0,0.630540576424764,2.21464689648775,3.50800491046472,1.14704320301017,0.690739927463582,1.44649058581512,6.03165135757089,2.71952841909355,1.96705709207614,2.75936746304733,0.80275294993896,0.937693492737625,2.13115428989678,1.51482556322624,0.631016438832513,0,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,1.28528526568723,1.27746076687442,1.24645922567079,0.977321756121456,1.97964147567043,0,0.971122544619926,0.302323556964751,0.754420319023592,0.295301892880773,0.922305443831782,1.80899805217755,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0.680879211507576,2.16073312837572,0.646793418913773,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,3.98941903708308,3.60114520468494,1.54369878638473,2.14352128823924,3.87514624070173,1.80938774784468,2.14870219205646,2.29797259643086,3.49777003955821,0.370850604021019,1.19609616558497,1.44470807574256,0.740778109478847,0.565105371014073,1.50363650493128,0.686334519619568,0.679913719975421,1.39951452323658,1.52019971184866,2.86401185404534,0.632671987162271,1.01659733563424,1.51207477150522,0.836353184057875,2.40198820120795,0.944050424693745,1.81837602595739,3.66458318777641,2.20345454596048,1.24267862617385,0,1.04661582230785,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.5256441023948,1.0416350787516,0.629156066554265,0.966336483304024,1.15212002503146,0.316011120628178,0.405450430580328,0.513554785824136,0,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.304827226619999,0.100826185136841,0.584747284438515,0.288635524920988,0.350630706544707,1.81384306892169,2.66383144048878,2.78112955489375,2.68615386182526,1.54551675225752,1.87682475451182,1.09890974560359,1.50057865355346,1.50471631210609,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.62272408550506,0.399024873401031,1.02440163452481,0.729320151204882,0.419226325255965,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.13175804831646,1.12369808963859,1.40855335290712,0.804096565378586,2.38146845641537,1.97003354106254,1.35036454324594,1.64834360321323,1.47198920134397,0.685738504770831,1.06485483695602,0.953744759789284,0.581385666529314,0.752875043322645,0.676916863133412,0.548783918618318,2.10455769150274,1.08643291076689,0,1.30498519936592,0.985044823755635,0.818462086339379,1.85924209423159,0.964533054905707,1.74867404556562,1.87145286756327,2.57845264857958,2.10417165275728,1.54413993383661,1.62307484934295
|phase1_expression=0.640595388419176,12.2141392673776,8.18998630901165,11.7961042409664,8.01433167914156,3.86122325397347,4.43864017131499,0,3.23814060948833,2.34064526321993,2.39705155515707,0.957265907944037,0.171200729931206,0,0.666219523631325,1.01237633694913,0.699561878128147,3.15462165358238,3.15363197293199,6.36584477697045,1.78590909317247,1.58865521921416,1.56719873483361,5.27974995218242,4.35877634027623,7.46501553349526,6.46142994238612,5.60225204983311,6.84084310042946,6.04872311423834,6.43018480900384,0,2.46025915033828,0,1.73310971850765,1.99481574430191,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,2.64383317748712,3.75094645512204,0.917733760808408,0,3.2703773457067,1.31811709640683,2.91644848611425,1.81982348112971,2.87505128729943,5.36904339384756,0,0.336093799142464,1.54355661621568,2.0057340795713,4.12537673821954,0,0,0,2.37191172448392,3.55717918444456,5.39939830368839,3.9554654502679,4.2628806896766,1.19840044207362,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.14918604276669,0.614426133024974,0.263772575460388,0.548925861614458,0,0.837548997004143,0,0.61119299110724,0,0.142371680799103,0,0.908714319998209,1.058001841495,2.6087803983151,0.860423876981386,0.679971333707751,1.07940638327563,3.89865850468601,0.448026887097336,1.40444420131752,1.02258193546835,1.81850203222008,3.5333957451034,1.12674735821344,0,2.54805239706646,0,0.649473123033642,0.760079596425296,3.0331466700887,1.7127581957859,2.58937883647172,1.1875371125186,0.520455980298408,0,0.922461989024234,0.452167921657868,0.940709657085638,0.628332956648377,4.20231445148436,3.32578520915797,2.65383165584962,0.970601099684455,1.10420759230197,0.969750506270444,1.86391761218122,1.17112318804619,1.46612694769419,4.59822699375465,0.958520996047362,2.99951365496704,0.762421362438388,0.898743836428936,0,0.125654352112864,0.521472960576829,1.27857728665165,0.83115217823824,1.1356888414743,1.62942982160506,2.11491850037158,1.76905930903572,1.05220927943237,0.520481771850815,0.919608417733892,0.900310649026746,1.05493372485001,1.2246569847239,1.15302348256365,0.937017245597288,1.03481348295606,1.07783996466421,1.70195472151037,0.351902248327898,0.876782929710299,0.556094498451196,1.74126083261083,2.26360350048738,0.398068533636986,0.702213187313235,0.772043721344145,0.284163499395593,1.24275463521301,0.938104239924385,0.900310307305074,3.31442629819294,0.590292695242212,0.617068451549513,1.16266972375204,1.07309360559848,1.98501082024188,1.15191894939436,0.820837320395476,1.62137619091711,1.60819986167866,1.3173006917463,1.74468344388483,0.841159794256509,0.308713837137853,7.59963200862735,3.70230793328962,1.2797295032114,0.928946687441754,1.41754207454303,2.01683524623343,2.66853652613844,2.85338439168839,6.64340686162316,3.95277491337626,2.76468729680296,3.97912944082302,3.11942539390592,3.59527763461689,2.59365659849633,5.37681437786791,0.569003702859245,0.456994050438915,0,0.814605311381257,1.16371492300575,1.33258057791605,2.15004226222475,2.50937251565324,1.56998727841375,3.33172342588861,1.1858105083486,0.83422552858047,1.17935397067922,1.34917267430912,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,3.34926852901653,1.5601883655728,2.52578877947112,1.79397413521912,3.85954817090694,1.84753190166605,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,0.714130922658041,0,0.630540576424764,2.21464689648775,3.50800491046472,1.14704320301017,0.690739927463582,1.44649058581512,6.03165135757089,2.71952841909355,1.96705709207614,2.75936746304733,0.80275294993896,0.937693492737625,2.13115428989678,1.51482556322624,0.631016438832513,0,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,1.28528526568723,1.27746076687442,1.24645922567079,0.977321756121456,1.97964147567043,0,0.971122544619926,0.302323556964751,0.754420319023592,0.295301892880773,0.922305443831782,1.80899805217755,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0.680879211507576,2.16073312837572,0.646793418913773,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,3.98941903708308,3.60114520468494,1.54369878638473,2.14352128823924,3.87514624070173,1.80938774784468,2.14870219205646,2.29797259643086,3.49777003955821,0.370850604021019,1.19609616558497,1.44470807574256,0.740778109478847,0.565105371014073,1.50363650493128,0.686334519619568,0.679913719975421,1.39951452323658,1.52019971184866,2.86401185404534,0.632671987162271,1.01659733563424,1.51207477150522,0.836353184057875,2.40198820120795,0.944050424693745,1.81837602595739,3.66458318777641,2.20345454596048,1.24267862617385,0,1.04661582230785,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.5256441023948,1.0416350787516,0.629156066554265,0.966336483304024,1.15212002503146,0.316011120628178,0.405450430580328,0.513554785824136,0,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.304827226619999,0.100826185136841,0.584747284438515,0.288635524920988,0.350630706544707,1.81384306892169,2.66383144048878,2.78112955489375,2.68615386182526,1.54551675225752,1.87682475451182,1.09890974560359,1.50057865355346,1.50471631210609,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.62272408550506,0.399024873401031,1.02440163452481,0.729320151204882,0.419226325255965,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.13175804831646,1.12369808963859,1.40855335290712,0.804096565378586,2.38146845641537,1.97003354106254,1.35036454324594,1.64834360321323,1.47198920134397,0.685738504770831,1.06485483695602,0.953744759789284,0.581385666529314,0.752875043322645,0.676916863133412,0.548783918618318,2.10455769150274,1.08643291076689,0,1.30498519936592,0.985044823755635,0.818462086339379,1.85924209423159,0.964533054905707,1.74867404556562,1.87145286756327,2.57845264857958,2.10417165275728,1.54413993383661,1.62307484934295
|short_description=p4@Snx9
|short_description=p4@Snx9
}}
}}

Latest revision as of 18:29, 26 September 2015

Short description:p4@Snx9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Snx9_5end
Coexpression cluster:MCL_coexpression_mm9:1505
Association with transcript: 14bp_to_NM_025664, uc008afj.1_5end
EntrezGene:Snx9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Snx9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I37.60
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine3.83e-1431
gastrointestinal system5.15e-1147
mucosa1.32e-0915
intestinal mucosa2.53e-0813
wall of intestine2.53e-0813
gastrointestinal system mucosa2.53e-0813
organ component layer3.55e-0824
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:5841394..5841410,%2B&oldid=4267878"