Personal tools

FFCP PHASE1:Mm9::chr17:71824688..71824699,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74355
|EntrezGene=74355
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6P5D8
|UniProt=Q6P5D8
|association_with_transcript=-5bp_to_ENSMUST00000024850,ENSMUST00000127430,NM_028887,uc008dmh.1_5end
|association_with_transcript=-5bp_to_ENSMUST00000024850,ENSMUST00000127430,NM_028887,uc008dmh.1_5end
|cluster_id=chr17:71824688..71824699,-
|description=CAGE_peak_4_at_Smchd1_5end
|description=CAGE_peak_4_at_Smchd1_5end
|id=chr17:71824688..71824699,-
|id=chr17:71824688..71824699,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0.60492842261366,0,0.503637815735669,1.63528848416868,3.35720640948098,1.12630977721333,0.468129052643987,1.19852577757853,1.19658238493005,2.56801094896809,2.79745287740792,4.99664642723494,3.64455481301687,1.39912375625629,3.78554598429885,3.70208970735495,3.39511721438424,1.10556277196391,1.88652807281682,3.39559725880616,0.47997726838022,0.68822784320151,0.57423196411502,0.430761996159075,0.646413698057667,0.380046838912748,0.756090389279792,1.55211357458713,1.90509202037889,1.84519436275371,0,0.866554859253824,0.997407872150954,1.42918549383658,1.25559489221072,1.5626706890476,1.0470474879476,1.17646297606203,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,0,0,0.388859798148567,0.419959264876088,1.43752564364972,3.02008690903925,2.90144856804538,2.35265659399725,0.257259436035947,1.14613375975503,0.515672092277442,1.21389876515759,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.76272340924412,0,0.630974884054146,0.285650984403804,0,0.857435594504678,0.479227355091182,0.919218786610021,1.10115880999389,0.383062014255563,1.0752457327937,0.791317726381163,0.914876436024097,2.08365348222704,0,0,0.45839474333043,0.589257170947335,1.42371680799103,0.559198337475902,0.605809546665472,1.058001841495,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0.681721290312231,1.29893002301434,1.06001872353102,0.845060518660083,1.28326477414318,0,0,1.29894624606728,1.26679932737549,1.51657333504435,0.45673551887624,6.21450920753212,1.1875371125186,1.56136794089522,1.52232739156071,0.922461989024234,1.80867168663147,1.29347577849275,0.628332956648377,0.741584903203122,0.289198713839823,1.76922110389975,1.29413479957927,3.75430581382669,1.93950101254089,0,0.878342391034642,1.67557365450764,1.27728527604296,2.51611761462433,1.19980546198682,2.03312363316904,0.599162557619291,2.28750301409313,1.25654352112864,1.21677024134594,1.27857728665165,0.20778804455956,0.811206315338788,1.52759045775474,1.24406970610093,2.0217820674694,0.210441855886474,1.95180664444056,0.689706313300419,1.44049703844279,1.80845781402858,1.49680298132921,1.7935920839879,2.15513966487376,0.517406741478031,2.80238390812695,2.45837904218165,2.63926686245923,2.84954452155847,1.66828349535359,1.74126083261083,1.23469281844766,1.59227413454795,3.51106593656617,2.05878325691772,0.852490498186778,1.44988040774851,1.40715635988658,1.80062061461015,2.84093682702252,1.37734962223183,2.00547246753592,0.697601834251224,1.87791380979733,1.16765342367169,2.96207729844265,1.14917224855367,0.891756905004413,0.730999937126662,0.658650345873152,0.939444931322602,0.841159794256509,1.44066457330998,0.660837565967596,1.32225283331772,1.2797295032114,2.09013004674395,2.44848176511977,1.81515172161008,2.44615848229357,1.14135375667535,0.949058123089023,0.164698954724011,1.50801125280162,0.397912944082302,1.16978452271472,2.69645822596266,0.648414149624083,0,1.13800740571849,2.17072173958485,4.50830942692322,1.22190796707189,1.16371492300575,0.911765658574141,1.26473074248515,0.738050739898011,0.784993639206874,0.246794327843601,0.296452627087149,3.83743743147016,2.35870794135844,3.37293168577281,4.05720242777006,3.13530307678142,1.01850340712568,1.43848068725405,0.972811360650212,0.274561413188081,1.43768206527355,2.23284568601102,1.24815069245824,1.01031551178845,0.179397413521912,0,0.923765950833023,2.27389694124582,2.77040459951444,1.52770577197669,1.87752198630802,2.01007508930179,1.6663054862021,0.780534591431195,2.36452716159286,2.21464689648775,1.2756381492599,0.491589944147214,2.07221978239075,0.867894351489069,1.50791283939272,0,2.45882136509518,0.551873492609465,0.642202359951168,0.468846746368813,1.14754461763673,0.252470927204373,0.94652465824877,0.390438744296638,1.72338718186239,1.91175038362042,2.89638276307112,1.98153571552183,2.02405350837447,2.04579100537918,2.37172666767914,2.24924921495265,1.56134093729095,0.890328018336276,1.46598263418218,2.63952196756057,0,1.69946445308487,0.302323556964751,1.69744571780308,2.06711325016541,0.307435147943927,0.516856586336442,2.18120237686503,1.78248689192361,0.632073515871632,0,0,0.340439605753788,2.16073312837572,1.03486947026204,1.92903331528433,0.354680467284547,0.535106452806212,1.48094118541909,0.913394847343798,2.11204537257339,1.48282449604674,1.10264199027481,1.15420377059036,1.93757312035087,1.80938774784468,2.02932984805332,3.28281799490123,0.582961673259701,0.556275906031529,1.36696704638282,1.857481811669,1.11116716421827,3.76736914009382,3.8274383761887,4.80434163733698,2.37969801991397,1.95932033253121,1.38199973804424,0,2.37251995185852,1.62655573701479,1.94409613479242,0.836353184057875,0.87345025498471,1.07891477107857,0.661227645802687,1.30877970992015,0.777689839750757,1.24267862617385,0.56369293868419,2.54178128274764,1.48912641411388,0.972255941720238,1.16243841129958,1.35164900392623,2.58185925020659,2.604087696879,2.72634295506848,0.724752362478018,1.15212002503146,2.52808896502543,1.01362607645082,1.84879722896689,1.81889152168913,3.22248052201467,2.78153896693771,2.88469078847925,2.51072196196781,2.82706059854813,2.81965184623499,2.72230699869469,2.92373642219257,2.5977197242889,2.22066114144981,0.680191150845634,1.55390167361845,0.986852422704233,1.67884616364078,0.772758376128762,1.12609485270709,1.64836461840539,1.2862102744744,0.501572104035363,1.6942555278512,0,1.71868654031819,2.23409137046794,0.685082519770642,0,2.02506750069542,1.35096360967266,0.453142408984205,1.03552062350364,2.07574695168353,3.99024873401031,1.02440163452481,3.16038732188782,1.46729213839588,1.2869045591501,0.44449345560323,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,2.1537546718073,2.36893063898016,1.60819313075717,0.952587382566147,1.85414921511769,2.31491064556446,1.64834360321323,2.79677948255355,1.37147700954166,1.59728225543404,1.90748951957857,1.59881058295561,1.41164070622996,1.60767754994185,2.56099162021882,0.526139422875686,1.90125759384206,1.68342681497322,2.01679530811096,1.0835493061312,1.22769312950907,1.23949472948773,2.3148793317737,0.249810577937946,1.16965804222704,0.859484216193193,1.3390183244819,0.882365676478062,1.62307484934295
|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0.60492842261366,0,0.503637815735669,1.63528848416868,3.35720640948098,1.12630977721333,0.468129052643987,1.19852577757853,1.19658238493005,2.56801094896809,2.79745287740792,4.99664642723494,3.64455481301687,1.39912375625629,3.78554598429885,3.70208970735495,3.39511721438424,1.10556277196391,1.88652807281682,3.39559725880616,0.47997726838022,0.68822784320151,0.57423196411502,0.430761996159075,0.646413698057667,0.380046838912748,0.756090389279792,1.55211357458713,1.90509202037889,1.84519436275371,0,0.866554859253824,0.997407872150954,1.42918549383658,1.25559489221072,1.5626706890476,1.0470474879476,1.17646297606203,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,0,0,0.388859798148567,0.419959264876088,1.43752564364972,3.02008690903925,2.90144856804538,2.35265659399725,0.257259436035947,1.14613375975503,0.515672092277442,1.21389876515759,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.76272340924412,0,0.630974884054146,0.285650984403804,0,0.857435594504678,0.479227355091182,0.919218786610021,1.10115880999389,0.383062014255563,1.0752457327937,0.791317726381163,0.914876436024097,2.08365348222704,0,0,0.45839474333043,0.589257170947335,1.42371680799103,0.559198337475902,0.605809546665472,1.058001841495,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0.681721290312231,1.29893002301434,1.06001872353102,0.845060518660083,1.28326477414318,0,0,1.29894624606728,1.26679932737549,1.51657333504435,0.45673551887624,6.21450920753212,1.1875371125186,1.56136794089522,1.52232739156071,0.922461989024234,1.80867168663147,1.29347577849275,0.628332956648377,0.741584903203122,0.289198713839823,1.76922110389975,1.29413479957927,3.75430581382669,1.93950101254089,0,0.878342391034642,1.67557365450764,1.27728527604296,2.51611761462433,1.19980546198682,2.03312363316904,0.599162557619291,2.28750301409313,1.25654352112864,1.21677024134594,1.27857728665165,0.20778804455956,0.811206315338788,1.52759045775474,1.24406970610093,2.0217820674694,0.210441855886474,1.95180664444056,0.689706313300419,1.44049703844279,1.80845781402858,1.49680298132921,1.7935920839879,2.15513966487376,0.517406741478031,2.80238390812695,2.45837904218165,2.63926686245923,2.84954452155847,1.66828349535359,1.74126083261083,1.23469281844766,1.59227413454795,3.51106593656617,2.05878325691772,0.852490498186778,1.44988040774851,1.40715635988658,1.80062061461015,2.84093682702252,1.37734962223183,2.00547246753592,0.697601834251224,1.87791380979733,1.16765342367169,2.96207729844265,1.14917224855367,0.891756905004413,0.730999937126662,0.658650345873152,0.939444931322602,0.841159794256509,1.44066457330998,0.660837565967596,1.32225283331772,1.2797295032114,2.09013004674395,2.44848176511977,1.81515172161008,2.44615848229357,1.14135375667535,0.949058123089023,0.164698954724011,1.50801125280162,0.397912944082302,1.16978452271472,2.69645822596266,0.648414149624083,0,1.13800740571849,2.17072173958485,4.50830942692322,1.22190796707189,1.16371492300575,0.911765658574141,1.26473074248515,0.738050739898011,0.784993639206874,0.246794327843601,0.296452627087149,3.83743743147016,2.35870794135844,3.37293168577281,4.05720242777006,3.13530307678142,1.01850340712568,1.43848068725405,0.972811360650212,0.274561413188081,1.43768206527355,2.23284568601102,1.24815069245824,1.01031551178845,0.179397413521912,0,0.923765950833023,2.27389694124582,2.77040459951444,1.52770577197669,1.87752198630802,2.01007508930179,1.6663054862021,0.780534591431195,2.36452716159286,2.21464689648775,1.2756381492599,0.491589944147214,2.07221978239075,0.867894351489069,1.50791283939272,0,2.45882136509518,0.551873492609465,0.642202359951168,0.468846746368813,1.14754461763673,0.252470927204373,0.94652465824877,0.390438744296638,1.72338718186239,1.91175038362042,2.89638276307112,1.98153571552183,2.02405350837447,2.04579100537918,2.37172666767914,2.24924921495265,1.56134093729095,0.890328018336276,1.46598263418218,2.63952196756057,0,1.69946445308487,0.302323556964751,1.69744571780308,2.06711325016541,0.307435147943927,0.516856586336442,2.18120237686503,1.78248689192361,0.632073515871632,0,0,0.340439605753788,2.16073312837572,1.03486947026204,1.92903331528433,0.354680467284547,0.535106452806212,1.48094118541909,0.913394847343798,2.11204537257339,1.48282449604674,1.10264199027481,1.15420377059036,1.93757312035087,1.80938774784468,2.02932984805332,3.28281799490123,0.582961673259701,0.556275906031529,1.36696704638282,1.857481811669,1.11116716421827,3.76736914009382,3.8274383761887,4.80434163733698,2.37969801991397,1.95932033253121,1.38199973804424,0,2.37251995185852,1.62655573701479,1.94409613479242,0.836353184057875,0.87345025498471,1.07891477107857,0.661227645802687,1.30877970992015,0.777689839750757,1.24267862617385,0.56369293868419,2.54178128274764,1.48912641411388,0.972255941720238,1.16243841129958,1.35164900392623,2.58185925020659,2.604087696879,2.72634295506848,0.724752362478018,1.15212002503146,2.52808896502543,1.01362607645082,1.84879722896689,1.81889152168913,3.22248052201467,2.78153896693771,2.88469078847925,2.51072196196781,2.82706059854813,2.81965184623499,2.72230699869469,2.92373642219257,2.5977197242889,2.22066114144981,0.680191150845634,1.55390167361845,0.986852422704233,1.67884616364078,0.772758376128762,1.12609485270709,1.64836461840539,1.2862102744744,0.501572104035363,1.6942555278512,0,1.71868654031819,2.23409137046794,0.685082519770642,0,2.02506750069542,1.35096360967266,0.453142408984205,1.03552062350364,2.07574695168353,3.99024873401031,1.02440163452481,3.16038732188782,1.46729213839588,1.2869045591501,0.44449345560323,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,2.1537546718073,2.36893063898016,1.60819313075717,0.952587382566147,1.85414921511769,2.31491064556446,1.64834360321323,2.79677948255355,1.37147700954166,1.59728225543404,1.90748951957857,1.59881058295561,1.41164070622996,1.60767754994185,2.56099162021882,0.526139422875686,1.90125759384206,1.68342681497322,2.01679530811096,1.0835493061312,1.22769312950907,1.23949472948773,2.3148793317737,0.249810577937946,1.16965804222704,0.859484216193193,1.3390183244819,0.882365676478062,1.62307484934295
|short_description=p4@Smchd1
|short_description=p4@Smchd1
}}
}}

Latest revision as of 20:39, 26 September 2015

Short description:p4@Smchd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Smchd1_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_ENSMUST00000024850, ENSMUST00000127430, NM_028887, uc008dmh.1_5end
EntrezGene:Smchd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Smchd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:71824688..71824699,-&oldid=4273128"