FFCP PHASE1:Mm9::chr9:40273387..40273396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |EntrezGene=235283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-238bp_to_ENSMUST00000148170_5end | |association_with_transcript=-238bp_to_ENSMUST00000148170_5end | ||
|cluster_id=chr9:40273387..40273396,- | |||
|description=CAGE_peak_34_at_Gramd1b_5end | |description=CAGE_peak_34_at_Gramd1b_5end | ||
|id=chr9:40273387..40273396,- | |id=chr9:40273387..40273396,- | ||
|ontology_enrichment_celltype=CL:0000239!1.42e-09!6;CL:0000677!1.42e-09!6;CL:0000212!1.42e-09!6;CL:0000584!1.42e-09!6;CL:0000075!3.84e-08!7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.56e-12!14;UBERON:0003918!4.56e-12!14;UBERON:0005095!4.56e-12!14;UBERON:0007687!4.56e-12!14;UBERON:0000344!1.79e-10!15;UBERON:0006554!2.50e-10!16;UBERON:0000160!1.18e-09!43;UBERON:0001008!1.30e-09!17;UBERON:0001242!9.72e-08!13;UBERON:0000060!9.72e-08!13;UBERON:0001262!9.72e-08!13;UBERON:0004786!9.72e-08!13;UBERON:0004923!1.62e-07!24;UBERON:0000489!1.92e-07!21;UBERON:0005409!4.58e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.63e-14,14;UBERON:0003918,1.63e-14,14;UBERON:0011143,1.63e-14,14;UBERON:0005095,1.63e-14,14;UBERON:0007687,1.63e-14,14;UBERON:0006554,2.63e-11,18;UBERON:0001008,1.03e-10,19;UBERON:0000305,9.82e-10,1;UBERON:0000489,1.07e-09,21 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,1.81478526784098,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,10.3821886448437,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.32225283331772,0,0,0,0,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.407302655690628,1.16371492300575,0.771494018793504,1.20149420536089,4.13308414342886,1.56998727841375,1.85095745882701,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,1.81478526784098,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,10.3821886448437,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.32225283331772,0,0,0,0,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.407302655690628,1.16371492300575,0.771494018793504,1.20149420536089,4.13308414342886,1.56998727841375,1.85095745882701,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p34@Gramd1b | |short_description=p34@Gramd1b | ||
}} | }} |
Latest revision as of 15:21, 26 September 2015
Short description: | p34@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | -238bp_to_ENSMUST00000148170_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.63e-14 | 14 |
kidney mesenchyme | 1.63e-14 | 14 |
upper urinary tract | 1.63e-14 | 14 |
kidney rudiment | 1.63e-14 | 14 |
kidney field | 1.63e-14 | 14 |
urinary system structure | 2.63e-11 | 18 |
renal system | 1.03e-10 | 19 |
amnion | 9.82e-10 | 1 |
cavitated compound organ | 1.07e-09 | 21 |