FFCP PHASE1:Mm9::chrX:92853731..92853751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245522 | |EntrezGene=245522 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=399 | |||
|TSSclassifier=NA | |||
|UniProt=Q05BE0 | |UniProt=Q05BE0 | ||
|association_with_transcript=0bp_to_ENSMUST00000120620_5end | |association_with_transcript=0bp_to_ENSMUST00000120620_5end | ||
|cluster_id=chrX:92853731..92853751,- | |||
|description=CAGE_peak_2_at_Zc4h2_5end | |description=CAGE_peak_2_at_Zc4h2_5end | ||
|id=chrX:92853731..92853751,- | |id=chrX:92853731..92853751,- | ||
|ontology_enrichment_celltype=CL:0000540!1.81e-13!33;CL:0000047!1.81e-13!33;CL:0000031!1.81e-13!33;CL:0000404!1.81e-13!33;CL:0000393!2.00e-12!39;CL:0000211!2.00e-12!39;CL:0000117!7.49e-10!23;CL:0000337!7.49e-10!23;CL:0000221!2.89e-07!44;CL:0000133!2.89e-07!44;CL:0002319!3.94e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.04e-13,33;CL:0000047,1.04e-13,33;CL:0000031,1.04e-13,33;CL:0000404,1.04e-13,33;CL:0000393,1.21e-12,39;CL:0000211,1.21e-12,39;CL:0000117,5.10e-10,23;CL:0000337,5.10e-10,23;CL:0000221,2.90e-07,44;CL:0000133,2.90e-07,44;CL:0002319,3.98e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.40e-20!73;UBERON:0005743!4.40e-20!73;UBERON:0000073!7.50e-20!75;UBERON:0001016!7.50e-20!75;UBERON:0002346!3.31e-19!71;UBERON:0003075!3.31e-19!71;UBERON:0007284!3.31e-19!71;UBERON:0000033!2.83e-17!63;UBERON:0001049!5.95e-17!52;UBERON:0005068!5.95e-17!52;UBERON:0006241!5.95e-17!52;UBERON:0007135!5.95e-17!52;UBERON:0003056!2.40e-16!49;UBERON:0004121!2.63e-16!102;UBERON:0000924!2.63e-16!102;UBERON:0006601!2.63e-16!102;UBERON:0000955!1.66e-15!50;UBERON:0006238!1.66e-15!50;UBERON:0002616!7.61e-15!49;UBERON:0002020!3.46e-14!34;UBERON:0003080!1.76e-13!40;UBERON:0000153!5.36e-13!94;UBERON:0002780!5.80e-13!39;UBERON:0001890!5.80e-13!39;UBERON:0006240!5.80e-13!39;UBERON:0002791!8.59e-12!29;UBERON:0003528!8.59e-12!29;UBERON:0001893!8.59e-12!29;UBERON:0007811!6.15e-11!86;UBERON:0000956!2.20e-08!21;UBERON:0001869!2.20e-08!21;UBERON:0000203!2.20e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.36e-22,64;UBERON:0003075,9.36e-22,64;UBERON:0007284,9.36e-22,64;UBERON:0001017,2.75e-20,73;UBERON:0001016,4.72e-20,75;UBERON:0000073,1.67e-17,54;UBERON:0004121,2.67e-17,95;UBERON:0000924,2.67e-17,95;UBERON:0006601,2.67e-17,95;UBERON:0001049,3.88e-17,52;UBERON:0005068,3.88e-17,52;UBERON:0006241,3.88e-17,52;UBERON:0007135,3.88e-17,52;UBERON:0010371,6.11e-17,73;UBERON:0003056,1.50e-16,49;UBERON:0000955,7.59e-15,47;UBERON:0006238,7.59e-15,47;UBERON:0010314,7.98e-15,92;UBERON:0002020,2.44e-14,34;UBERON:0002616,3.53e-14,46;UBERON:0003080,1.25e-13,40;UBERON:0002780,4.22e-13,39;UBERON:0001890,4.22e-13,39;UBERON:0006240,4.22e-13,39;UBERON:0003528,6.72e-12,29;UBERON:0002791,6.72e-12,29;UBERON:0001893,6.72e-12,29;UBERON:0000956,1.99e-08,21;UBERON:0001869,1.99e-08,21;UBERON:0000203,1.99e-08,21 | |||
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| ||
|short_description=p2@Zc4h2 | |short_description=p2@Zc4h2 | ||
}} | }} |
Latest revision as of 00:50, 2 October 2015
Short description: | p2@Zc4h2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zc4h2_5end |
Coexpression cluster: | MCL_coexpression_mm9:399 |
Association with transcript: | 0bp_to_ENSMUST00000120620_5end |
EntrezGene: | Zc4h2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.04e-13 | 33 |
neuronal stem cell | 1.04e-13 | 33 |
neuroblast | 1.04e-13 | 33 |
electrically signaling cell | 1.04e-13 | 33 |
electrically responsive cell | 1.21e-12 | 39 |
electrically active cell | 1.21e-12 | 39 |
CNS neuron (sensu Vertebrata) | 5.10e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.10e-10 | 23 |
ectodermal cell | 2.90e-07 | 44 |
neurectodermal cell | 2.90e-07 | 44 |
neural cell | 3.98e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.36e-22 | 64 |
neural plate | 9.36e-22 | 64 |
presumptive neural plate | 9.36e-22 | 64 |
central nervous system | 2.75e-20 | 73 |
nervous system | 4.72e-20 | 75 |
regional part of nervous system | 1.67e-17 | 54 |
ectoderm-derived structure | 2.67e-17 | 95 |
ectoderm | 2.67e-17 | 95 |
presumptive ectoderm | 2.67e-17 | 95 |
neural tube | 3.88e-17 | 52 |
neural rod | 3.88e-17 | 52 |
future spinal cord | 3.88e-17 | 52 |
neural keel | 3.88e-17 | 52 |
ecto-epithelium | 6.11e-17 | 73 |
pre-chordal neural plate | 1.50e-16 | 49 |
brain | 7.59e-15 | 47 |
future brain | 7.59e-15 | 47 |
structure with developmental contribution from neural crest | 7.98e-15 | 92 |
gray matter | 2.44e-14 | 34 |
regional part of brain | 3.53e-14 | 46 |
anterior neural tube | 1.25e-13 | 40 |
regional part of forebrain | 4.22e-13 | 39 |
forebrain | 4.22e-13 | 39 |
future forebrain | 4.22e-13 | 39 |
brain grey matter | 6.72e-12 | 29 |
regional part of telencephalon | 6.72e-12 | 29 |
telencephalon | 6.72e-12 | 29 |
cerebral cortex | 1.99e-08 | 21 |
cerebral hemisphere | 1.99e-08 | 21 |
pallium | 1.99e-08 | 21 |