Swissregulon:PAX8.p1: Difference between revisions
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(Created page with "{{SwissregulonMotif
|datasource=http://www.swissregulon.unibas.ch/
|name=PAX8.p1
|associated_transcription_factors=1.000:7849:PAX8:paired box 8:PAX:NM_013952:
|weight_mat...") |
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:7849:PAX8:paired box 8:PAX:NM_013952: | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0048869!cellular developmental process!1.14292050032188e-06!637;3753;944;4168;23139;4763;4929;10371;1437;5552;2118;140691;353137;64065;5468;7472$GO:0030154!cell differentiation!1.14292050032188e-06!637;3753;944;4168;23139;4763;4929;10371;1437;5552;2118;140691;353137;64065;5468;7472$GO:0032502!developmental process!2.25141859442402e-05!637;3753;944;4168;258;23139;4763;4929;10371;1437;1586;5552;2118;140691;353137;64065;5468;7472;3225$GO:0048468!cell development!3.29474654355829e-05!637;5552;1437;2118;140691;3753;944;64065;4168;7472;4763;4929$GO:0032501!multicellular organismal process!0.000123135444089695!4622;2562;3753;4168;258;23139;4763;4929;84676;10371;1437;5552;2118;353137;3225;7472;2571$GO:0005515!protein binding!0.000400092778272902!9871;27436;637;4622;5983;2562;944;10213;23139;4763;6047;4929;84676;7431;5552;1437;126364;140691;9465;402;64065;5468;7472;3225;1123;399694;2571$GO:0048522!positive regulation of cellular process!0.00103447105213394!637;1437;2118;944;5468;7472;4763;4929;6047$GO:0030424!axon!0.00188776330213545!1586;2562;4763$GO:0048518!positive regulation of biological process!0.00188776330213545!637;1437;2118;944;5468;7472;4763;4929;6047$GO:0048699!generation of neurons!0.00240133435116986!4168;7472;4763;2118;4929$GO:0022008!neurogenesis!0.00318794326296846!4168;7472;4763;2118;4929$GO:0048731!system development!0.00630258269563315!10371;5552;1437;2118;353137;4168;258;7472;4763;4929$GO:0048856!anatomical structure development!0.00743804417925607!10371;5552;1437;2118;3753;353137;4168;258;7472;4763;4929$GO:0019226!transmission of nerve impulse!0.00743804417925607!7472;2562;4763;4929;2571$GO:0016324!apical plasma membrane!0.0076965797804984!7472;3753;9465$GO:0001937!negative regulation of endothelial cell proliferation!0.0076965797804984!7472;4763$GO:0006915!apoptosis!0.0109138209028433!64065;637;5552;1437;4763;140691;944$GO:0043005!neuron projection!0.0109138209028433!1586;2562;4763$GO:0012501!programmed cell death!0.0109138209028433!64065;637;5552;1437;4763;140691;944$GO:0045177!apical part of cell!0.010929182706591!7472;3753;9465$GO:0001936!regulation of endothelial cell proliferation!0.010929182706591!7472;4763$GO:0031214!biomineral formation!0.010929182706591!5552;258;4763$GO:0001503!ossification!0.010929182706591!5552;258;4763$GO:0007267!cell-cell signaling!0.010929182706591!7472;2562;4763;944;4929;2571$GO:0008219!cell death!0.010929182706591!64065;637;5552;1437;4763;140691;944$GO:0016265!death!0.010929182706591!64065;637;5552;1437;4763;140691;944$GO:0001935!endothelial cell proliferation!0.0116298375206694!7472;4763$GO:0007275!multicellular organismal development!0.0116298375206694!10371;5552;1437;2118;353137;4168;258;7472;3225;4763;4929$GO:0046849!bone remodeling!0.0116815057640099!5552;258;4763$GO:0030282!bone mineralization!0.0117301632351209!5552;258$GO:0048771!tissue remodeling!0.0142075109052718!5552;258;4763$GO:0046850!regulation of bone remodeling!0.0155469763305468!5552;4763$GO:0007399!nervous system development!0.0155469763305468!10371;4168;7472;4763;2118;4929$GO:0012506!vesicle membrane!0.0160489570484597!9871;7472;2571$GO:0009653!anatomical structure morphogenesis!0.0182567755234367!4168;258;7472;4763;2118;3753;353137$GO:0043226!organelle!0.0182567755234367!9871;27436;637;4622;5983;3753;503582;4168;23139;4763;6047;4929;84676;7431;5552;1586;2118;140691;64065;5468;375686;7472;3225;8345;54957;2571$GO:0007268!synaptic transmission!0.0182567755234367!7472;2562;4929;2571$GO:0051402!neuron apoptosis!0.0182567755234367!637;4763$GO:0005856!cytoskeleton!0.0182567755234367!27436;84676;7431;4622;64065;4168;375686;23139$GO:0009888!tissue development!0.0182567755234367!5552;258;4763;353137$GO:0042133!neurotransmitter metabolic process!0.0182567755234367!4929;2571$GO:0007154!cell communication!0.0182567755234367!637;2562;944;11228;4168;4763;6047;4929;84676;1437;9465;402;5468;7472;1123;2571;399694$GO:0042995!cell projection!0.0182567755234367!1586;7472;2562;4763$GO:0048513!organ development!0.0182567755234367!5552;1437;258;7472;4763;2118;353137$GO:0007165!signal transduction!0.0182567755234367!84676;637;1437;2562;9465;944;402;11228;5468;4168;7472;1123;4763;399694;6047;4929$GO:0006996!organelle organization and biogenesis!0.0182567755234367!27436;637;7431;5552;4622;7472;4763;8345$GO:0014065!phosphoinositide 3-kinase cascade!0.0182567755234367!4763$GO:0033371!T cell secretory granule organization and biogenesis!0.0182567755234367!5552$GO:0033377!maintenance of protein localization in T cell secretory granule!0.0182567755234367!5552$GO:0033365!protein localization in organelle!0.0182567755234367!5552$GO:0048715!negative regulation of oligodendrocyte differentiation!0.0182567755234367!4763$GO:0033370!maintenance of protein localization in mast cell secretory granule!0.0182567755234367!5552$GO:0033367!protein localization in mast cell secretory granule!0.0182567755234367!5552$GO:0004508!steroid 17-alpha-monooxygenase activity!0.0182567755234367!1586$GO:0018352!protein-pyridoxal-5-phosphate linkage!0.0182567755234367!2571$GO:0033366!protein localization in secretory granule!0.0182567755234367!5552$GO:0033382!maintenance of granzyme B localization in T cell secretory granule!0.0182567755234367!5552$GO:0033373!maintenance of protease localization in mast cell secretory granule!0.0182567755234367!5552$GO:0031432!titin binding!0.0182567755234367!84676$GO:0008460!dTDP-glucose 4,6-dehydratase activity!0.0182567755234367!23483$GO:0033380!granzyme B localization in T cell secretory granule!0.0182567755234367!5552$GO:0048745!smooth muscle development!0.0182567755234367!4763$GO:0033379!maintenance of protease localization in T cell secretory granule!0.0182567755234367!5552$GO:0033364!mast cell secretory granule organization and biogenesis!0.0182567755234367!5552$GO:0005477!pyruvate secondary active transmembrane transporter activity!0.0182567755234367!9194$GO:0033368!protease localization in mast cell secretory granule!0.0182567755234367!5552$GO:0021897!forebrain astrocyte development!0.0182567755234367!4763$GO:0033374!protein localization in T cell secretory granule!0.0182567755234367!5552$GO:0005129!granulocyte macrophage colony-stimulating factor receptor binding!0.0182567755234367!1437$GO:0033375!protease localization in T cell secretory granule!0.0182567755234367!5552$GO:0050833!pyruvate transmembrane transporter activity!0.0182567755234367!9194$GO:0021896!forebrain astrocyte differentiation!0.0182567755234367!4763$GO:0006848!pyruvate transport!0.0182567755234367!9194$GO:0003008!system process!0.0187033541382477!84676;4622;2562;3753;7472;4763;2571;4929$GO:0006936!muscle contraction!0.0213895891473859!84676;4622;3753$GO:0003012!muscle system process!0.0213895891473859!84676;4622;3753$GO:0016043!cellular component organization and biogenesis!0.023623662629531!9871;27436;637;7431;5552;4622;2118;4168;7472;8345;4763$GO:0043229!intracellular organelle!0.0257488443849505!9871;27436;637;4622;5983;3753;503582;4168;23139;4763;6047;4929;84676;7431;5552;1586;2118;140691;64065;5468;375686;7472;3225;8345;54957$GO:0006928!cell motility!0.0260856100662663!7431;7472;4763;2118$GO:0051674!localization of cell!0.0260856100662663!7431;7472;4763;2118$GO:0050872!white fat cell differentiation!0.0280379589307101!5468$GO:0048485!sympathetic nervous system development!0.0280379589307101!4763$GO:0006540!glutamate decarboxylation to succinate!0.0280379589307101!2571$GO:0042629!mast cell granule!0.0280379589307101!5552$GO:0033363!secretory granule organization and biogenesis!0.0280379589307101!5552$GO:0005128!erythropoietin receptor binding!0.0280379589307101!1437$GO:0022011!myelination in the peripheral nervous system!0.0280379589307101!4763$GO:0032292!ensheathment of axons in the peripheral nervous system!0.0280379589307101!4763$GO:0043409!negative regulation of MAPKKK cascade!0.0280379589307101!4763$GO:0043011!myeloid dendritic cell differentiation!0.0280379589307101!1437$GO:0048713!regulation of oligodendrocyte differentiation!0.0280379589307101!4763$GO:0006105!succinate metabolic process!0.0280379589307101!2571$GO:0048854!brain morphogenesis!0.0280379589307101!4763$GO:0004351!glutamate decarboxylase activity!0.0280379589307101!2571$GO:0048853!forebrain morphogenesis!0.0280379589307101!4763$GO:0051179!localization!0.0283336685255589!9871;7431;5552;4622;2562;2118;3753;9465;9194;7472;8671;4763;28965$GO:0005624!membrane fraction!0.0283336685255589!637;9194;4168;1586;7472$GO:0007010!cytoskeleton organization and biogenesis!0.0285755743392851!27436;7431;4622;7472;4763$GO:0001501!skeletal development!0.0320474062879047!5552;258;4763$GO:0030182!neuron differentiation!0.0321543662952729!4168;2118;4929$GO:0043292!contractile fiber!0.0347181483570974!84676;4622$GO:0044422!organelle part!0.0347181483570974!9871;27436;84676;637;7431;4622;5983;140691;375686;7472;8345;54957;2571$GO:0045686!negative regulation of glial cell differentiation!0.0347181483570974!4763$GO:0043535!regulation of blood vessel endothelial cell migration!0.0347181483570974!4763$GO:0006538!glutamate catabolic process!0.0347181483570974!2571$GO:0008510!sodium:bicarbonate symporter activity!0.0347181483570974!8671$GO:0048483!autonomic nervous system development!0.0347181483570974!4763$GO:0014037!Schwann cell differentiation!0.0347181483570974!4763$GO:0048844!artery morphogenesis!0.0347181483570974!4763$GO:0014014!negative regulation of gliogenesis!0.0347181483570974!4763$GO:0022616!DNA strand elongation!0.0347181483570974!5983$GO:0006271!DNA strand elongation during DNA replication!0.0347181483570974!5983$GO:0007406!negative regulation of neuroblast proliferation!0.0347181483570974!4763$GO:0045600!positive regulation of fat cell differentiation!0.0347181483570974!5468$GO:0014044!Schwann cell development!0.0347181483570974!4763$GO:0016477!cell migration!0.0370477792689406!7472;4763;2118$GO:0001505!regulation of neurotransmitter levels!0.0396991798736965!4929;2571$GO:0043195!terminal button!0.0396991798736965!2562$GO:0045075!regulation of interleukin-12 biosynthetic process!0.0396991798736965!23139$GO:0050890!cognition!0.0396991798736965!4763$GO:0043534!blood vessel endothelial cell migration!0.0396991798736965!4763$GO:0045598!regulation of fat cell differentiation!0.0396991798736965!5468$GO:0033267!axon part!0.0396991798736965!2562$GO:0042090!interleukin-12 biosynthetic process!0.0396991798736965!23139$GO:0001773!myeloid dendritic cell activation!0.0396991798736965!1437$GO:0042069!regulation of catecholamine metabolic process!0.0396991798736965!4929$GO:0021987!cerebral cortex development!0.0396991798736965!4763$GO:0050710!negative regulation of cytokine secretion!0.0396991798736965!5552$GO:0030502!negative regulation of bone mineralization!0.0396991798736965!5552$GO:0014002!astrocyte development!0.0396991798736965!4763$GO:0051932!synaptic transmission, GABAergic!0.0396991798736965!2562$GO:0006704!glucocorticoid biosynthetic process!0.0396991798736965!1586$GO:0002070!epithelial cell maturation!0.0396991798736965!3753$GO:0042053!regulation of dopamine metabolic process!0.0396991798736965!4929$GO:0043065!positive regulation of apoptosis!0.0413056215670408!637;4763;944$GO:0043068!positive regulation of programmed cell death!0.0418900497456411!637;4763;944$GO:0007242!intracellular signaling cascade!0.044987200712186!637;9465;402;4168;1123;4763;6047;399694$GO:0016323!basolateral plasma membrane!0.0451370910407672!7472;8671$GO:0008045!motor axon guidance!0.0467951959354896!2118$GO:0002064!epithelial cell development!0.0467951959354896!3753$GO:0018065!protein-cofactor linkage!0.0467951959354896!2571$GO:0030325!adrenal gland development!0.0467951959354896!4763$GO:0051239!regulation of multicellular organismal process!0.0484130194252151!5552;4763;3753$GO:0045941!positive regulation of transcription!0.049031117434729!2118;6047;4929 | |||
|gostat_on_mara_mm9= | |||
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|motif_activities_mm9=1.64308382958,0.765772650646,0.387847616597,0.838194820779,1.19920494356,0.791841245986,1.26868475061,1.17615283194,1.86481722724,1.35581587987,2.37607860047,1.88836999457,0.982749941088,0.585234132506,0.588871039823,0.96683428033,1.01741430097,0.539440101807,0.434390144056,0.435589581888,-1.87993882135,1.15995451351,1.44950552541,0.605868620637,0.500735157982,0.664837499781,1.1472198053,0.830020413075,0.0918653114656,0.189300136319,0.920206878984,1.94379110315,1.54355933307,2.00560757924,1.88035306166,1.31847666865,1.73924580412,-1.14878827461,-0.380331397284,-1.01358453747,-1.28004024585,-1.3221720349,-1.22539467212,0.789703745554,0.407862553605,0.165424106433,-1.08717478871,0.0168802856058,-0.205693176965,-0.89744091486,-0.579766667484,-0.732582825108,0.813159764351,1.03797701891,0.920231045081,0.401768552202,0.0943859527916,0.669081185119,0.696591313057,1.23651732564,0.187507925915,-0.371839491234,-0.461280889387,-0.257286316303,-0.714286888718,-0.830425450791,-1.08005470916,-0.701111586314,1.31487577178,1.2599108718,1.38105227639,0.78691832525,0.580789968948,1.21622405058,0.978639618663,1.22537341197,0.751065962163,0.341569507159,0.286247493653,0.55510109049,0.665681372431,1.02720319544,0.159142593343,-0.177185683325,0.809994479496,1.54495927251,1.76094817756,1.41449487942,2.28803449657,0.918098754848,-0.436154227687,-0.938303732084,2.06741895723,0.570933040574,-0.683116141467,-0.139591495079,-1.03709769101,0.233765140026,0.137754847152,0.433201023112,2.30318764326,0.060082523323,1.11409351816,1.19955692286,1.28490219028,1.94846685805,1.60828500184,-0.725167035386,0.0570243397333,-0.52049957335,-0.192547561834,-0.896549121334,-1.19298997973,-0.765149721807,-0.788026487759,-1.06943077543,-0.887228143471,-1.54097249887,-1.00843919766,-0.897342287722,-0.415735657308,-0.13028910818,-0.415873260298,-0.856926702487,-0.136442711443,0.264829261872,2.13037687951,2.05487159799,1.77377683041,0.381883630662,0.246033035505,1.64028988746,1.32010690229,0.745484180762,0.589903650544,1.04415707758,-0.220798374982,-0.406384248661,-0.351446711498,-0.71809245328,0.628945411927,0.518448062149,0.705051263143,0.246452023004,0.436994526614,0.399673680213,0.23390199967,0.412654289935,1.59804168032,0.738916914641,0.17058327319,-0.440826831089,0.391871520514,-0.527692841421,-0.306986343558,-0.265096767083,1.90087532102,1.77268825896,2.05983643933,0.072151837235,-0.203106013872,-0.179236074826,0.0311229138374,-0.28868248836,-0.542293323259,-0.313500319709,-0.691108485187,-0.329840747093,-0.590920393204,-1.44315506691,-1.97306273065,-1.96425934868,-1.88018733123,-2.41950935878,1.13456243776,1.54551965806,0.840930873929,-0.030487155185,0.149302421497,-0.145184834032,0.170674420263,0.0136275864678,-0.16427308949,-0.232492957074,0.12469223055,-0.877842804719,-0.66284073999,-0.902316535184,-1.20000491335,0.0595869546914,-0.317280394364,0.401265115808,0.256301212525,-0.235716418988,0.22848475038,0.0400139118959,-0.320643190654,-0.226379581078,-0.821330579715,-1.56694507375,-1.30995716186,-1.37866863311,-0.0755488846514,0.668178939419,0.370133053715,0.0151335760338,-0.314066606688,-0.459699543155,-0.673723739744,-1.36227398083,-1.06841321773,-0.245580151114,-1.06402151174,-1.59392195007,-1.72653914308,-0.635873678414,-0.361382504865,-0.560216116541,-1.90292039046,0.231117945315,0.411154484559,-0.0578898459967,0.388413438898,-0.883881665308,-1.72109192947,-1.46198659547,-1.64447971664,-1.54755544381,-1.24571477777,-1.7889591786,-1.77084284914,-1.97337374977,-1.61363107196,-0.817772864873,-0.448426067448,-1.79243390958,0.180269575006,0.542304890026,-0.0685215414648,-0.823291980498,0.840968471196,0.807675616945,0.572793986901,0.901814675686,0.512438014516,0.204976298195,1.01038294553,0.48312178687,0.628207236266,0.986488536777,-2.06048274147,-2.15865545044,-1.5412652017,-1.75789433533,0.362408022594,-0.384886688831,0.192732852475,0.048998309422,-0.395046040449,-0.409623983342,-0.302317748298,0.759446856313,0.343749909514,0.541374654147,-0.167989529008,0.871381997789,0.22264460614,0.412224351669,-0.0628519842963,-0.0122655491573,-0.316257055965,-0.272333936894,-0.117851343786,-0.732755866656,-1.09998087362,-0.927812525993,-0.376644014335,0.414573341527,-0.442032599547,0.0187644851032,0.0660578987532,0.235228749527,-0.0926295667149,0.273511978732,-0.764187311059,-0.606087497992,-0.76017118805,-0.491167895819,-0.206829844232,-0.0887209497689,2.27466805807,2.18107099235,2.19028595043,1.82568624089,0.424829426949,-0.899686927149,-0.486160203228,-0.187971261518,0.196709845403,0.0809249136472,-0.205803869497,-0.0262310766648,-0.650059025253,-1.64159032757,-2.206554115,-0.267731954226,-0.295150850609,-0.788634003679,-1.34498176305,-1.68462719497,-1.01806140589,-0.618073751894,-0.54931826048,-1.54722475774,-2.14633373216,-0.867703084741,-0.0463131817757,-0.482166929149,-0.113363595159,-0.541268292198,-0.637164778767,-0.219827615868,-0.289641969031,-0.251343127937,-0.382603583604,-0.455314190371,-0.504299213327,-0.595476054053,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| |||
|name=PAX8.p1 | |name=PAX8.p1 | ||
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}} | }} |
Latest revision as of 09:57, 17 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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