FFCP PHASE1:Hg19::chr10:106113320..106113338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000435434_5end | |association_with_transcript=0bp_to_ENST00000435434_5end | ||
|cluster_id=chr10:106113320..106113338,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ENST00000435434_5end | |description=CAGE_peak_1_at_ENST00000435434_5end | ||
|id=chr10:106113320..106113338,- | |id=chr10:106113320..106113338,- | ||
|ontology_enrichment_celltype=CL:0000766!8.07e-20!76;CL:0002057!2.83e-19!42;CL:0000839!7.05e-17!70;CL:0000860!9.30e-17!45;CL:0000557!1.22e-16!71;CL:0000763!4.00e-15!112;CL:0000049!4.00e-15!112;CL:0002009!5.32e-15!65;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000738!2.46e-11!140;CL:0002031!2.49e-10!124;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000037!2.69e-09!172;CL:0000566!2.69e-09!172;CL:0000988!1.11e-07!182;CL:0002087!1.74e-07!119 | |ontology_enrichment_celltype=CL:0000766!8.07e-20!76;CL:0002057!2.83e-19!42;CL:0000839!7.05e-17!70;CL:0000860!9.30e-17!45;CL:0000557!1.22e-16!71;CL:0000763!4.00e-15!112;CL:0000049!4.00e-15!112;CL:0002009!5.32e-15!65;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000738!2.46e-11!140;CL:0002031!2.49e-10!124;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000037!2.69e-09!172;CL:0000566!2.69e-09!172;CL:0000988!1.11e-07!182;CL:0002087!1.74e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.49e-36;33!CL:0002057;8.49e-36;33!CL:0000473;1.32e-26;39!CL:0000234;1.32e-26;39!CL:0000576;1.96e-19;48!CL:0000766;5.60e-17;69!CL:0000094;3.25e-15;8!CL:0000081;1.02e-10;11!CL:0000775;6.07e-09;3!CL:0000763;1.07e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.81e-38,72;CL:0000860,2.32e-37,42;CL:0002057,2.32e-37,42;CL:0000473,2.95e-34,48;CL:0000234,2.95e-34,48;CL:0000557,1.38e-29,67;CL:0002009,7.42e-29,61;CL:0000763,6.58e-28,108;CL:0000049,6.58e-28,108;CL:0000839,7.41e-28,66;CL:0002194,1.04e-25,59;CL:0000576,1.04e-25,59;CL:0000040,1.04e-25,59;CL:0000559,1.04e-25,59;CL:0000738,5.31e-20,136;CL:0002032,3.86e-17,161;CL:0000837,3.86e-17,161;CL:0000037,6.02e-16,168;CL:0002031,6.82e-16,120;CL:0000094,3.62e-15,8;CL:0000988,1.48e-14,177;CL:0002087,1.91e-11,115;CL:0000081,1.10e-10,11;CL:0000775,6.03e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.97e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.26e-18!102;UBERON:0003061!4.26e-18!102;UBERON:0002193!1.91e-17!112;UBERON:0002371!8.63e-17!80;UBERON:0004765!1.76e-14!101;UBERON:0001434!1.76e-14!101;UBERON:0001474!5.96e-14!86;UBERON:0002204!1.17e-13!167;UBERON:0002405!2.95e-11!115;UBERON:0007023!1.14e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!4.26e-18!102;UBERON:0003061!4.26e-18!102;UBERON:0002193!1.91e-17!112;UBERON:0002371!8.63e-17!80;UBERON:0004765!1.76e-14!101;UBERON:0001434!1.76e-14!101;UBERON:0001474!5.96e-14!86;UBERON:0002204!1.17e-13!167;UBERON:0002405!2.95e-11!115;UBERON:0007023!1.14e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-31,98;UBERON:0003061,2.20e-31,98;UBERON:0002371,7.78e-31,76;UBERON:0002193,4.76e-29,108;UBERON:0001474,7.45e-28,82;UBERON:0002405,5.36e-25,93;UBERON:0004765,1.68e-24,90;UBERON:0001434,4.52e-21,100;UBERON:0003081,7.05e-15,203;UBERON:0002204,5.51e-12,167;UBERON:0000926,1.91e-07,315;UBERON:0004120,1.91e-07,315;UBERON:0006603,1.91e-07,315;UBERON:0002780,2.61e-07,41;UBERON:0001890,2.61e-07,41;UBERON:0003080,2.61e-07,41;UBERON:0006240,2.61e-07,41;UBERON:0001869,3.81e-07,32 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.982935746006035,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,1.53531759238885,1.08371286321253,0,0,0,0.154934401160603,0,0,1.10799081706375,1.60435557976113,3.03815219002193,0,0,0,1.01778767145695,0.755751887377619,0.485168122375632,3.0215774797739,3.28934310417461,6.50383378879718,3.45230870786581,2.81776777182011,3.31075121844019,14.1345729102014,14.2006630388442,16.251178391321,2.63539275359647,0.818718450173537,3.37085226667627,8.57034898638527,8.98601275813062,12.1474053901818,0.659702600373432,0.398927315243264,0.426224750532694,28.7307146242298,19.8584828641899,21.7987787148451,3.51748131359441,2.08593167368081,5.86409880703815,20.5835830895345,23.2014910672166,32.5956259064111,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0.651083453856419,0,0.451725357233318,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.0843174571537,0,0.579386075843295,1.5905718941022,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0.97364218096405,0.522389211897802,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,35.5807127077371,38.7780264148325,0,0,0,0.397227542439656,0,0.709336764396714,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0.597794722207204,0.117434498643765,0,0,1.22492502752936,0.245668634623536,0.309977343527296,0,0,1.82032272387605,0.718618141816238,0.336672227908132,0.250237039743928,0.831192346452549,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.977424915930974,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,2.10603838625314,0.743155811443641,0,0.16798212819886,0,0.179117045405697,0,0,26.6038148463809,0.616339038092582,1.24396869324463,0.288239906833923,0.75745460055828,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.784596007954691,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0.502548796003046,0,23.9682247663098,11.966458368161,25.2793463195982,0.12269149171914,0,0.813795071099207,0,0,0,0,0,0,0,0.664225598535437,0,0,0.391602314925481,0,0,0.431428401637234,0.960548020230999,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.657017248110473,0.519254429183621,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,1.31555925987561,0.522870902049801,0,0,0.325378394664303,0.309123034943167,0,0,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.551346289938122,0.859361958946189,0.290033387828457,0.426133137080504,0,0.330569830721956,0,0.765676274967505,0.10115778085555,0,0.31481234683064,1.3940745403212,0,0,0,0.37064843820784,0.143124886741991,0.744316738719335,0.316379424718726,0,0.511795582622668,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.471249609382746,0.808729926293264,0,0,0.975267478179181,2.43713489631284,1.05650146756755,0.136499911407986,0.141405431953713,0,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,3.82318603571188,2.27858874869665,1.19115887728894,0.411362273086194,1.29694662238543,2.70015718619057,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0.5745161103971,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,1.93866549219044,1.85536196323703,0,0,0,0,0,0.254253650292766,1.41832609060762,0.689486746482929,0.874813840149763,0,0.885741385813839,1.68835014075571,0,0.221158519862449,0,0.438770794307945,0.653630781113941,0.139423744278603,0.153900517007594,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.451191321234361,0.784250137270958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| ||
|short_description=p1@ENST00000435434 | |short_description=p1@ENST00000435434 | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p1@ENST00000435434 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000435434_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000435434_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.81e-38 | 72 |
classical monocyte | 2.32e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-37 | 42 |
defensive cell | 2.95e-34 | 48 |
phagocyte | 2.95e-34 | 48 |
granulocyte monocyte progenitor cell | 1.38e-29 | 67 |
macrophage dendritic cell progenitor | 7.42e-29 | 61 |
myeloid cell | 6.58e-28 | 108 |
common myeloid progenitor | 6.58e-28 | 108 |
myeloid lineage restricted progenitor cell | 7.41e-28 | 66 |
monopoietic cell | 1.04e-25 | 59 |
monocyte | 1.04e-25 | 59 |
monoblast | 1.04e-25 | 59 |
promonocyte | 1.04e-25 | 59 |
leukocyte | 5.31e-20 | 136 |
hematopoietic oligopotent progenitor cell | 3.86e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-17 | 161 |
hematopoietic stem cell | 6.02e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 6.82e-16 | 120 |
granulocyte | 3.62e-15 | 8 |
hematopoietic cell | 1.48e-14 | 177 |
nongranular leukocyte | 1.91e-11 | 115 |
blood cell | 1.10e-10 | 11 |
neutrophil | 6.03e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-31 | 98 |
blood island | 2.20e-31 | 98 |
bone marrow | 7.78e-31 | 76 |
hemolymphoid system | 4.76e-29 | 108 |
bone element | 7.45e-28 | 82 |
immune system | 5.36e-25 | 93 |
skeletal element | 1.68e-24 | 90 |
skeletal system | 4.52e-21 | 100 |
lateral plate mesoderm | 7.05e-15 | 203 |
musculoskeletal system | 5.51e-12 | 167 |
mesoderm | 1.91e-07 | 315 |
mesoderm-derived structure | 1.91e-07 | 315 |
presumptive mesoderm | 1.91e-07 | 315 |
regional part of forebrain | 2.61e-07 | 41 |
forebrain | 2.61e-07 | 41 |
anterior neural tube | 2.61e-07 | 41 |
future forebrain | 2.61e-07 | 41 |
cerebral hemisphere | 3.81e-07 | 32 |