FFCP PHASE1:Mm9::chr5:138187583..138187602,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78829 | |EntrezGene=78829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=257 | |||
|TSSclassifier=NA | |||
|UniProt=Q9EQN3,Q8BV82,Q3U1U6 | |UniProt=Q9EQN3,Q8BV82,Q3U1U6 | ||
|association_with_transcript=359bp_to_ENSMUST00000100539,uc009adt.1,uc009adu.1,uc009adv.1_5end | |association_with_transcript=359bp_to_ENSMUST00000100539,uc009adt.1,uc009adu.1,uc009adv.1_5end | ||
|cluster_id=chr5:138187583..138187602,+ | |||
|description=CAGE_peak_6_at_Tsc22d4_5end | |description=CAGE_peak_6_at_Tsc22d4_5end | ||
|id=chr5:138187583..138187602,+ | |id=chr5:138187583..138187602,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.80e-15!193;UBERON:0004120!9.80e-15!193;UBERON:0006603!9.80e-15!193;UBERON:0003081!2.42e-09!88;UBERON:0003104!3.57e-07!131;UBERON:0009142!3.57e-07!131;UBERON:0001048!9.61e-07!147 | |ontology_enrichment_uberon=UBERON:0000926!9.80e-15!193;UBERON:0004120!9.80e-15!193;UBERON:0006603!9.80e-15!193;UBERON:0003081!2.42e-09!88;UBERON:0003104!3.57e-07!131;UBERON:0009142!3.57e-07!131;UBERON:0001048!9.61e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.51e-08,120;UBERON:0004120,1.51e-08,120;UBERON:0006603,1.51e-08,120;UBERON:0000077,7.83e-08,35;UBERON:0003081,2.33e-07,87;UBERON:0004921,2.50e-07,114;UBERON:0004177,2.95e-07,29;UBERON:0005057,2.95e-07,29;UBERON:0004119,3.87e-07,118;UBERON:0000925,3.87e-07,118;UBERON:0006595,3.87e-07,118;UBERON:0001007,7.11e-07,116;UBERON:0001555,7.11e-07,116;UBERON:0007026,7.11e-07,116 | |||
|phase1_expression=0,0.348975407639361,0,0,1.00179145989269,0.33575854382378,0.467225281191051,0.258246646883153,0.281577444303333,1.17032263160997,0.34243593645101,0.0797721589953364,0.342401459862411,0.524522414513984,0.999329285446988,1.41732687172878,0.699561878128147,0.788655413395594,1.09691546884591,0.84877930359606,1.10556277196391,0.695036658406197,0.783599367416806,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0.837063261473815,0,1.0470474879476,1.17646297606203,0.683045484958446,0.971020706062307,1.76255545165808,1.72340783073175,0.367093504323363,0.782391344348039,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0.336093799142464,0.514518872071894,0.85960031981627,0,0.202316460859598,0,0,0,0,1.7997994345628,5.93319817540185,5.6838409195688,2.09720077362883,2.68952813725088,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0.151143120213571,0.579728977403356,0,1.3599426674155,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,4.45317130904334,4.91981978929626,0.742210695324124,1.21439728736295,2.13125834818499,0.922461989024234,0.753613202763113,2.58695155698551,1.0053327306374,5.19109432242185,1.44599356919912,5.30766331169925,2.10296904931632,2.87093973998512,2.90925151881133,7.45567044872489,0.585561594023094,4.1889341362691,15.3274233125155,0.239630249011841,0.599902730993408,0.381210681219194,0.748953197024114,0,0.376963056338593,0,0.255715457330331,0,0,0.81471491080253,3.4833951770826,0.758168275301024,1.26265113531884,1.04096354370163,0.689706313300419,0.360124259610698,0,1.02054748726992,0,0.562210347358373,1.03481348295606,1.5089759505299,1.32374256117473,1.05570674498369,1.7535658594206,0.834141747676794,1.0447564995665,1.4404749548556,0.59710280045548,0.702213187313235,0.257347907114715,0,2.07125772535502,0.469052119962192,0.540186184383045,0.946978942340841,0.590292695242212,0.771335564436891,0.697601834251224,1.07309360559848,1.40118410840603,1.48103864922132,0.820837320395476,3.89130285820108,2.92399974850665,1.97595103761946,1.61047702512446,0,0.205809224758569,4.62586296177317,5.02456076660734,1.2797295032114,0,1.15980715189884,2.01683524623343,0.667134131534611,0.951128130562796,13.7613427847908,1.64698954724011,1.75934646160189,7.16243299348143,4.28920991662064,28.7622210769351,6.70027954611552,7.76650965692032,6.2590407314517,0.342745537829186,3.38123207019241,1.22190796707189,1.93952487167626,1.61312385747733,0.632365371242573,1.03327103585722,0.470996183524124,0.987177311374404,1.1858105083486,0.83422552858047,2.35870794135844,1.57403478669398,0.608580364165509,2.17059443777175,1.01850340712568,2.01387296215567,25.4552306036806,3.29473695825698,0,6.69853705803306,1.5601883655728,0.252578877947112,0.538192240565737,3.37710464954357,2.40179147216586,0.757965647081939,0,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,2.34160377429359,0.630540576424764,0.44292937929755,0.797273843287435,0.491589944147214,1.72684981865896,1.3018415272336,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0,0,0.655739781506702,0.757412781613119,1.26203287766503,0.390438744296638,0,0,1.33679204449436,1.41538265394416,0,1.46127928955656,1.97643888973262,0,2.55492153374884,1.6025904330053,1.62886959353576,2.96946221350564,9.2921596837974,1.45668381692989,0.906970670894253,1.13163047853539,0.590603785761546,0.922305443831782,2.06742634534577,6.5436071305951,3.20847640546249,2.84433082142234,0,3.09406629744561,0,1.44048875225048,1.68166288917581,1.71469628025274,0.709360934569094,1.24858172321449,1.48094118541909,0.913394847343798,1.17335854031855,1.48282449604674,1.32317038832977,2.14352128823924,9.04200789497071,0.784068024066026,1.19372344003136,0.984845398470368,32.6458537025433,0.18542530201051,11.4483490134561,3.714963623338,2.03713980106683,2.26042148405629,5.46776910884101,4.11800711771741,0.339956859987711,0.69975726161829,0.276399947608848,0.954670618015114,1.73984796469624,0.203319467126849,0.540026704109006,0.836353184057875,1.09181281873089,1.21377911746339,1.90102948168273,1.83229159388821,3.6292192521702,6.21339313086926,0.56369293868419,1.49516546043979,0.66183396182839,1.55560950675238,1.03327858782185,2.02747350588934,1.76035857968631,0.781226309063701,1.78260885523708,0.483168241652012,0.288030006257865,32.8651565453305,2.22997736819181,3.18403967210964,4.54722880422283,5.01274747868948,7.15252877212554,5.88957702647847,6.20296014133224,6.15895344683701,5.02964923922999,3.7305688500631,10.233077477674,6.25376970662141,9.35015217452552,0.453460767230423,0.887943813496259,1.07656627931371,0.671538465456314,1.54551675225752,3.19060208267009,4.2124873581471,6.64541975145104,5.517293144389,0,0,0,0,0,0,0,0,0.453142408984205,0,0.62272408550506,0.798049746802062,0.341467211508268,1.70174701947806,1.25767897576789,0.367687016900028,0.666740183404846,0.412070114477788,0.962757628775446,0,0.25347929989024,0.943131706930381,0.37456602987953,0.768301828858431,0.689225627467359,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,0.145346416632329,0.564656282491984,0.507687647350059,0.365855945745545,0.526139422875686,0.543216455383447,0,0.474540072496697,0.689531376628944,0.409231043169689,0.154936841185966,0.964533054905707,2.49810577937946,1.87145286756327,4.08255002691767,7.26895661861605,2.64709702943419,2.55054619182464 | |phase1_expression=0,0.348975407639361,0,0,1.00179145989269,0.33575854382378,0.467225281191051,0.258246646883153,0.281577444303333,1.17032263160997,0.34243593645101,0.0797721589953364,0.342401459862411,0.524522414513984,0.999329285446988,1.41732687172878,0.699561878128147,0.788655413395594,1.09691546884591,0.84877930359606,1.10556277196391,0.695036658406197,0.783599367416806,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0.837063261473815,0,1.0470474879476,1.17646297606203,0.683045484958446,0.971020706062307,1.76255545165808,1.72340783073175,0.367093504323363,0.782391344348039,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0.336093799142464,0.514518872071894,0.85960031981627,0,0.202316460859598,0,0,0,0,1.7997994345628,5.93319817540185,5.6838409195688,2.09720077362883,2.68952813725088,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0.151143120213571,0.579728977403356,0,1.3599426674155,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,4.45317130904334,4.91981978929626,0.742210695324124,1.21439728736295,2.13125834818499,0.922461989024234,0.753613202763113,2.58695155698551,1.0053327306374,5.19109432242185,1.44599356919912,5.30766331169925,2.10296904931632,2.87093973998512,2.90925151881133,7.45567044872489,0.585561594023094,4.1889341362691,15.3274233125155,0.239630249011841,0.599902730993408,0.381210681219194,0.748953197024114,0,0.376963056338593,0,0.255715457330331,0,0,0.81471491080253,3.4833951770826,0.758168275301024,1.26265113531884,1.04096354370163,0.689706313300419,0.360124259610698,0,1.02054748726992,0,0.562210347358373,1.03481348295606,1.5089759505299,1.32374256117473,1.05570674498369,1.7535658594206,0.834141747676794,1.0447564995665,1.4404749548556,0.59710280045548,0.702213187313235,0.257347907114715,0,2.07125772535502,0.469052119962192,0.540186184383045,0.946978942340841,0.590292695242212,0.771335564436891,0.697601834251224,1.07309360559848,1.40118410840603,1.48103864922132,0.820837320395476,3.89130285820108,2.92399974850665,1.97595103761946,1.61047702512446,0,0.205809224758569,4.62586296177317,5.02456076660734,1.2797295032114,0,1.15980715189884,2.01683524623343,0.667134131534611,0.951128130562796,13.7613427847908,1.64698954724011,1.75934646160189,7.16243299348143,4.28920991662064,28.7622210769351,6.70027954611552,7.76650965692032,6.2590407314517,0.342745537829186,3.38123207019241,1.22190796707189,1.93952487167626,1.61312385747733,0.632365371242573,1.03327103585722,0.470996183524124,0.987177311374404,1.1858105083486,0.83422552858047,2.35870794135844,1.57403478669398,0.608580364165509,2.17059443777175,1.01850340712568,2.01387296215567,25.4552306036806,3.29473695825698,0,6.69853705803306,1.5601883655728,0.252578877947112,0.538192240565737,3.37710464954357,2.40179147216586,0.757965647081939,0,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,2.34160377429359,0.630540576424764,0.44292937929755,0.797273843287435,0.491589944147214,1.72684981865896,1.3018415272336,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0,0,0.655739781506702,0.757412781613119,1.26203287766503,0.390438744296638,0,0,1.33679204449436,1.41538265394416,0,1.46127928955656,1.97643888973262,0,2.55492153374884,1.6025904330053,1.62886959353576,2.96946221350564,9.2921596837974,1.45668381692989,0.906970670894253,1.13163047853539,0.590603785761546,0.922305443831782,2.06742634534577,6.5436071305951,3.20847640546249,2.84433082142234,0,3.09406629744561,0,1.44048875225048,1.68166288917581,1.71469628025274,0.709360934569094,1.24858172321449,1.48094118541909,0.913394847343798,1.17335854031855,1.48282449604674,1.32317038832977,2.14352128823924,9.04200789497071,0.784068024066026,1.19372344003136,0.984845398470368,32.6458537025433,0.18542530201051,11.4483490134561,3.714963623338,2.03713980106683,2.26042148405629,5.46776910884101,4.11800711771741,0.339956859987711,0.69975726161829,0.276399947608848,0.954670618015114,1.73984796469624,0.203319467126849,0.540026704109006,0.836353184057875,1.09181281873089,1.21377911746339,1.90102948168273,1.83229159388821,3.6292192521702,6.21339313086926,0.56369293868419,1.49516546043979,0.66183396182839,1.55560950675238,1.03327858782185,2.02747350588934,1.76035857968631,0.781226309063701,1.78260885523708,0.483168241652012,0.288030006257865,32.8651565453305,2.22997736819181,3.18403967210964,4.54722880422283,5.01274747868948,7.15252877212554,5.88957702647847,6.20296014133224,6.15895344683701,5.02964923922999,3.7305688500631,10.233077477674,6.25376970662141,9.35015217452552,0.453460767230423,0.887943813496259,1.07656627931371,0.671538465456314,1.54551675225752,3.19060208267009,4.2124873581471,6.64541975145104,5.517293144389,0,0,0,0,0,0,0,0,0.453142408984205,0,0.62272408550506,0.798049746802062,0.341467211508268,1.70174701947806,1.25767897576789,0.367687016900028,0.666740183404846,0.412070114477788,0.962757628775446,0,0.25347929989024,0.943131706930381,0.37456602987953,0.768301828858431,0.689225627467359,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,0.145346416632329,0.564656282491984,0.507687647350059,0.365855945745545,0.526139422875686,0.543216455383447,0,0.474540072496697,0.689531376628944,0.409231043169689,0.154936841185966,0.964533054905707,2.49810577937946,1.87145286756327,4.08255002691767,7.26895661861605,2.64709702943419,2.55054619182464 | ||
|short_description=p6@Tsc22d4 | |short_description=p6@Tsc22d4 | ||
}} | }} |
Latest revision as of 15:00, 25 September 2015
Short description: | p6@Tsc22d4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tsc22d4_5end |
Coexpression cluster: | MCL_coexpression_mm9:257 |
Association with transcript: | 359bp_to_ENSMUST00000100539, uc009adt.1, uc009adu.1, uc009adv.1_5end |
EntrezGene: | Tsc22d4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.51e-08 | 120 |
mesoderm-derived structure | 1.51e-08 | 120 |
presumptive mesoderm | 1.51e-08 | 120 |
mixed endoderm/mesoderm-derived structure | 7.83e-08 | 35 |
lateral plate mesoderm | 2.33e-07 | 87 |
subdivision of digestive tract | 2.50e-07 | 114 |
hemopoietic organ | 2.95e-07 | 29 |
immune organ | 2.95e-07 | 29 |
endoderm-derived structure | 3.87e-07 | 118 |
endoderm | 3.87e-07 | 118 |
presumptive endoderm | 3.87e-07 | 118 |
digestive system | 7.11e-07 | 116 |
digestive tract | 7.11e-07 | 116 |
primitive gut | 7.11e-07 | 116 |