FFCP PHASE1:Hg19::chr10:17271561..17271615,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=367bp_to_uc001iot.1_5end | |association_with_transcript=367bp_to_uc001iot.1_5end | ||
|cluster_id=chr10:17271561..17271615,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_4_at_uc001iot.1_5end | |description=CAGE_peak_4_at_uc001iot.1_5end | ||
|id=chr10:17271561..17271615,- | |id=chr10:17271561..17271615,- | ||
|ontology_enrichment_celltype=CL:0000055!6.16e-30!180;CL:0002371!2.80e-26!591;CL:0000144!2.54e-23!625;CL:0000048!4.40e-19!430;CL:0000057!5.00e-18!75;CL:0000723!1.12e-17!436;CL:0000222!3.68e-17!119;CL:0000034!6.14e-16!444;CL:0000548!6.27e-15!679;CL:0000004!6.27e-15!679;CL:0000255!6.27e-15!679;CL:0000012!1.50e-14!682;CL:0000680!3.01e-12!57;CL:0000056!3.01e-12!57;CL:0000355!3.01e-12!57;CL:0000183!8.00e-12!59;CL:0000187!1.31e-11!54;CL:0002320!4.86e-10!365;CL:0000393!6.14e-10!60;CL:0000211!6.14e-10!60;CL:0000192!9.35e-10!42;CL:0000514!9.35e-10!42;CL:0000134!1.36e-08!358;CL:0000219!2.28e-08!390;CL:0000003!4.51e-08!722;CL:0000359!4.57e-08!32;CL:0002620!9.62e-08!23 | |ontology_enrichment_celltype=CL:0000055!6.16e-30!180;CL:0002371!2.80e-26!591;CL:0000144!2.54e-23!625;CL:0000048!4.40e-19!430;CL:0000057!5.00e-18!75;CL:0000723!1.12e-17!436;CL:0000222!3.68e-17!119;CL:0000034!6.14e-16!444;CL:0000548!6.27e-15!679;CL:0000004!6.27e-15!679;CL:0000255!6.27e-15!679;CL:0000012!1.50e-14!682;CL:0000680!3.01e-12!57;CL:0000056!3.01e-12!57;CL:0000355!3.01e-12!57;CL:0000183!8.00e-12!59;CL:0000187!1.31e-11!54;CL:0002320!4.86e-10!365;CL:0000393!6.14e-10!60;CL:0000211!6.14e-10!60;CL:0000192!9.35e-10!42;CL:0000514!9.35e-10!42;CL:0000134!1.36e-08!358;CL:0000219!2.28e-08!390;CL:0000003!4.51e-08!722;CL:0000359!4.57e-08!32;CL:0002620!9.62e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.17e-08;32!CL:0002620;3.64e-08;23!CL:0000192;3.74e-08;43!CL:0000057;6.12e-08;73!CL:0000187;2.55e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.60e-20,427;CL:0000057,1.22e-19,76;CL:0000723,7.12e-19,433;CL:0000222,3.68e-18,121;CL:0000034,4.11e-17,441;CL:0000680,3.46e-13,58;CL:0000056,3.46e-13,58;CL:0000355,3.46e-13,58;CL:0000187,1.65e-12,55;CL:0000393,7.10e-11,61;CL:0000211,7.10e-11,61;CL:0000192,1.53e-10,43;CL:0000514,1.53e-10,43;CL:0002320,3.72e-10,361;CL:0000134,1.18e-08,354;CL:0000219,1.54e-08,386;CL:0000359,1.84e-08,32;CL:0002620,4.04e-08,23;CL:0002078,6.62e-07,45;CL:0000115,8.35e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;3.74e-08;43!CL:0000355;1.39e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.19e-18!167;UBERON:0003081!3.77e-18!216;UBERON:0000914!6.80e-16!83;UBERON:0002329!6.80e-16!83;UBERON:0003077!6.80e-16!83;UBERON:0003059!6.80e-16!83;UBERON:0007282!6.80e-16!83;UBERON:0009618!6.80e-16!83;UBERON:0007285!6.80e-16!83;UBERON:0002049!1.18e-15!79;UBERON:0007798!1.18e-15!79;UBERON:0004535!2.36e-14!110;UBERON:0004290!2.78e-14!70;UBERON:0001009!2.77e-13!113;UBERON:0000055!1.69e-12!69;UBERON:0004872!1.81e-12!84;UBERON:0001981!8.74e-12!60;UBERON:0007500!8.74e-12!60;UBERON:0004537!8.74e-12!60;UBERON:0006965!8.74e-12!60;UBERON:0000486!1.01e-11!82;UBERON:0000926!2.36e-11!448;UBERON:0004120!2.36e-11!448;UBERON:0006603!2.36e-11!448;UBERON:0001134!3.01e-11!61;UBERON:0002036!3.01e-11!61;UBERON:0003082!3.01e-11!61;UBERON:0001637!7.37e-11!42;UBERON:0003509!7.37e-11!42;UBERON:0004572!7.37e-11!42;UBERON:0002385!7.44e-11!63;UBERON:0001015!7.44e-11!63;UBERON:0000383!7.44e-11!63;UBERON:0002384!3.03e-10!375;UBERON:0004573!2.33e-08!33;UBERON:0004571!2.33e-08!33;UBERON:0000468!8.19e-08!659;UBERON:0004765!1.61e-07!101;UBERON:0001434!1.61e-07!101;UBERON:0005256!1.64e-07!143;UBERON:0003914!3.17e-07!118;UBERON:0002199!4.59e-07!45;UBERON:0002416!4.59e-07!45;UBERON:0000480!6.63e-07!626;UBERON:0000467!8.41e-07!625 | |ontology_enrichment_uberon=UBERON:0002204!1.19e-18!167;UBERON:0003081!3.77e-18!216;UBERON:0000914!6.80e-16!83;UBERON:0002329!6.80e-16!83;UBERON:0003077!6.80e-16!83;UBERON:0003059!6.80e-16!83;UBERON:0007282!6.80e-16!83;UBERON:0009618!6.80e-16!83;UBERON:0007285!6.80e-16!83;UBERON:0002049!1.18e-15!79;UBERON:0007798!1.18e-15!79;UBERON:0004535!2.36e-14!110;UBERON:0004290!2.78e-14!70;UBERON:0001009!2.77e-13!113;UBERON:0000055!1.69e-12!69;UBERON:0004872!1.81e-12!84;UBERON:0001981!8.74e-12!60;UBERON:0007500!8.74e-12!60;UBERON:0004537!8.74e-12!60;UBERON:0006965!8.74e-12!60;UBERON:0000486!1.01e-11!82;UBERON:0000926!2.36e-11!448;UBERON:0004120!2.36e-11!448;UBERON:0006603!2.36e-11!448;UBERON:0001134!3.01e-11!61;UBERON:0002036!3.01e-11!61;UBERON:0003082!3.01e-11!61;UBERON:0001637!7.37e-11!42;UBERON:0003509!7.37e-11!42;UBERON:0004572!7.37e-11!42;UBERON:0002385!7.44e-11!63;UBERON:0001015!7.44e-11!63;UBERON:0000383!7.44e-11!63;UBERON:0002384!3.03e-10!375;UBERON:0004573!2.33e-08!33;UBERON:0004571!2.33e-08!33;UBERON:0000468!8.19e-08!659;UBERON:0004765!1.61e-07!101;UBERON:0001434!1.61e-07!101;UBERON:0005256!1.64e-07!143;UBERON:0003914!3.17e-07!118;UBERON:0002199!4.59e-07!45;UBERON:0002416!4.59e-07!45;UBERON:0000480!6.63e-07!626;UBERON:0000467!8.41e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.12e-08;42!UBERON:0003509;1.12e-08;42!UBERON:0004572;1.12e-08;42!UBERON:0002049;3.01e-08;75!UBERON:0007798;3.01e-08;75!UBERON:0004573;4.89e-08;33!UBERON:0004571;4.89e-08;33!UBERON:0007500;5.27e-08;56!UBERON:0001981;5.27e-08;56!UBERON:0004537;5.27e-08;56!UBERON:0003914;3.22e-07;74 | |||
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| ||
|short_description=p4@uc001iot.1 | |short_description=p4@uc001iot.1 | ||
}} | }} |
Latest revision as of 12:14, 23 July 2015
Short description: | p4@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 367bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.60e-20 | 427 |
fibroblast | 1.22e-19 | 76 |
somatic stem cell | 7.12e-19 | 433 |
mesodermal cell | 3.68e-18 | 121 |
stem cell | 4.11e-17 | 441 |
muscle precursor cell | 3.46e-13 | 58 |
myoblast | 3.46e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.46e-13 | 58 |
muscle cell | 1.65e-12 | 55 |
electrically responsive cell | 7.10e-11 | 61 |
electrically active cell | 7.10e-11 | 61 |
smooth muscle cell | 1.53e-10 | 43 |
smooth muscle myoblast | 1.53e-10 | 43 |
connective tissue cell | 3.72e-10 | 361 |
mesenchymal cell | 1.18e-08 | 354 |
motile cell | 1.54e-08 | 386 |
vascular associated smooth muscle cell | 1.84e-08 | 32 |
skin fibroblast | 4.04e-08 | 23 |
meso-epithelial cell | 6.62e-07 | 45 |
endothelial cell | 8.35e-07 | 36 |