FFCP PHASE1:Hg19::chr10:33428212..33428227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33428212..33428227,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:33428212..33428227,+ | |description=CAGE_peak_at_chr10:33428212..33428227,+ | ||
|id=chr10:33428212..33428227,+ | |id=chr10:33428212..33428227,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.80e-21!52;CL:0000542!1.14e-20!53;CL:0000051!1.14e-20!53;CL:0000084!1.22e-19!25;CL:0000827!1.22e-19!25;CL:0000791!3.49e-19!18;CL:0000789!3.49e-19!18;CL:0002420!3.49e-19!18;CL:0002419!3.49e-19!18;CL:0000790!3.49e-19!18;CL:0000624!4.05e-19!6;CL:0000623!5.87e-15!3;CL:0000825!5.87e-15!3;CL:0000738!5.17e-14!140;CL:0002031!3.45e-12!124;CL:0002087!1.45e-11!119;CL:0000037!2.34e-10!172;CL:0000566!2.34e-10!172;CL:0002032!5.86e-10!165;CL:0000837!5.86e-10!165;CL:0000988!1.75e-09!182;CL:0000767!5.02e-07!3;CL:0000898!6.96e-07!3;CL:0000625!7.33e-07!11 | |ontology_enrichment_celltype=CL:0000838!3.80e-21!52;CL:0000542!1.14e-20!53;CL:0000051!1.14e-20!53;CL:0000084!1.22e-19!25;CL:0000827!1.22e-19!25;CL:0000791!3.49e-19!18;CL:0000789!3.49e-19!18;CL:0002420!3.49e-19!18;CL:0002419!3.49e-19!18;CL:0000790!3.49e-19!18;CL:0000624!4.05e-19!6;CL:0000623!5.87e-15!3;CL:0000825!5.87e-15!3;CL:0000738!5.17e-14!140;CL:0002031!3.45e-12!124;CL:0002087!1.45e-11!119;CL:0000037!2.34e-10!172;CL:0000566!2.34e-10!172;CL:0002032!5.86e-10!165;CL:0000837!5.86e-10!165;CL:0000988!1.75e-09!182;CL:0000767!5.02e-07!3;CL:0000898!6.96e-07!3;CL:0000625!7.33e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.90e-34;3!CL:0000624;1.07e-29;6!CL:0000791;1.41e-29;18!CL:0000789;1.41e-29;18!CL:0002419;1.41e-29;18!CL:0000084;3.78e-21;25!CL:0000625;8.99e-10;11!CL:0000542;9.30e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.07e-34,3;CL:0000825,3.07e-34,3;CL:0000624,1.07e-29,6;CL:0000791,1.51e-29,18;CL:0000789,1.51e-29,18;CL:0002420,1.51e-29,18;CL:0002419,1.51e-29,18;CL:0000790,1.51e-29,18;CL:0000084,3.96e-21,25;CL:0000827,3.96e-21,25;CL:0000838,4.36e-20,52;CL:0000542,1.10e-19,53;CL:0000051,1.10e-19,53;CL:0002087,4.45e-10,115;CL:0000738,5.32e-10,136;CL:0000625,9.40e-10,11;CL:0002031,1.35e-09,120;CL:0002032,3.47e-08,161;CL:0000837,3.47e-08,161;CL:0000037,8.96e-08,168;CL:0000988,2.73e-07,177;CL:0000815,9.54e-07,2;CL:0000792,9.54e-07,2;CL:0002677,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.41e-29;18!CL:0000051;9.30e-10;53 | |||
|ontology_enrichment_disease=DOID:3910!1.98e-09!2 | |ontology_enrichment_disease=DOID:3910!1.98e-09!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004903!1.98e-09!2;UBERON:0002173!1.98e-09!2;UBERON:0002186!1.98e-09!2 | |ontology_enrichment_uberon=UBERON:0004903!1.98e-09!2;UBERON:0002173!1.98e-09!2;UBERON:0002186!1.98e-09!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:33428212..33428227,+ | |short_description=p@chr10:33428212..33428227,+ | ||
}} | }} |
Latest revision as of 13:21, 23 July 2015
Short description: | p@chr10:33428212..33428227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33428212..33428227, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.07e-34 | 3 |
pro-NK cell | 3.07e-34 | 3 |
CD4-positive, alpha-beta T cell | 1.07e-29 | 6 |
mature alpha-beta T cell | 1.51e-29 | 18 |
alpha-beta T cell | 1.51e-29 | 18 |
immature T cell | 1.51e-29 | 18 |
mature T cell | 1.51e-29 | 18 |
immature alpha-beta T cell | 1.51e-29 | 18 |
T cell | 3.96e-21 | 25 |
pro-T cell | 3.96e-21 | 25 |
lymphoid lineage restricted progenitor cell | 4.36e-20 | 52 |
lymphocyte | 1.10e-19 | 53 |
common lymphoid progenitor | 1.10e-19 | 53 |
nongranular leukocyte | 4.45e-10 | 115 |
leukocyte | 5.32e-10 | 136 |
CD8-positive, alpha-beta T cell | 9.40e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 120 |
hematopoietic oligopotent progenitor cell | 3.47e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.47e-08 | 161 |
hematopoietic stem cell | 8.96e-08 | 168 |
hematopoietic cell | 2.73e-07 | 177 |
regulatory T cell | 9.54e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.54e-07 | 2 |
naive regulatory T cell | 9.54e-07 | 2 |