FFCP PHASE1:Hg19::chr14:91976874..91976905,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55671 | |EntrezGene=55671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20219 | |HGNC=20219 | ||
|TSSclassifier=strong | |||
|UniProt=G3V231 | |UniProt=G3V231 | ||
|association_with_transcript=0bp_to_ENST00000557018_5end | |association_with_transcript=0bp_to_ENST00000557018_5end | ||
|cluster_id=chr14:91976874..91976905,- | |||
|description=CAGE_peak_3_at_SMEK1_5end | |description=CAGE_peak_3_at_SMEK1_5end | ||
|id=chr14:91976874..91976905,- | |id=chr14:91976874..91976905,- | ||
|ontology_enrichment_celltype=CL:0000037!1.48e-41!172;CL:0000566!1.48e-41!172;CL:0002032!5.12e-38!165;CL:0000837!5.12e-38!165;CL:0000988!1.38e-36!182;CL:0000738!5.73e-36!140;CL:0002087!2.70e-34!119;CL:0002031!5.63e-31!124;CL:0000860!6.12e-22!45;CL:0002057!3.33e-21!42;CL:0000763!1.42e-20!112;CL:0000049!1.42e-20!112;CL:0002009!8.59e-17!65;CL:0000542!1.84e-16!53;CL:0000051!1.84e-16!53;CL:0000557!1.85e-16!71;CL:0000838!2.39e-16!52;CL:0002194!5.99e-16!63;CL:0000576!5.99e-16!63;CL:0000040!5.99e-16!63;CL:0000559!5.99e-16!63;CL:0000766!1.22e-15!76;CL:0000839!6.78e-14!70;CL:0000945!4.66e-09!24;CL:0000826!4.66e-09!24;CL:0000084!5.22e-07!25;CL:0000827!5.22e-07!25 | |ontology_enrichment_celltype=CL:0000037!1.48e-41!172;CL:0000566!1.48e-41!172;CL:0002032!5.12e-38!165;CL:0000837!5.12e-38!165;CL:0000988!1.38e-36!182;CL:0000738!5.73e-36!140;CL:0002087!2.70e-34!119;CL:0002031!5.63e-31!124;CL:0000860!6.12e-22!45;CL:0002057!3.33e-21!42;CL:0000763!1.42e-20!112;CL:0000049!1.42e-20!112;CL:0002009!8.59e-17!65;CL:0000542!1.84e-16!53;CL:0000051!1.84e-16!53;CL:0000557!1.85e-16!71;CL:0000838!2.39e-16!52;CL:0002194!5.99e-16!63;CL:0000576!5.99e-16!63;CL:0000040!5.99e-16!63;CL:0000559!5.99e-16!63;CL:0000766!1.22e-15!76;CL:0000839!6.78e-14!70;CL:0000945!4.66e-09!24;CL:0000826!4.66e-09!24;CL:0000084!5.22e-07!25;CL:0000827!5.22e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-17;33!CL:0002057;3.26e-17;33!CL:0000576;4.97e-14;48!CL:0002087;4.75e-12;104!CL:0000473;7.15e-12;39!CL:0000234;7.15e-12;39!CL:0000542;4.86e-10;53!CL:0000945;5.42e-09;24!CL:0000766;9.83e-09;69!CL:0000763;3.28e-08;100!CL:0000738;5.66e-08;136!CL:0000988;1.79e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.50e-41,168;CL:0002032,5.57e-38,161;CL:0000837,5.57e-38,161;CL:0000988,5.19e-37,177;CL:0000738,6.26e-36,136;CL:0002087,4.07e-34,115;CL:0002031,8.38e-31,120;CL:0000860,1.96e-21,42;CL:0002057,1.96e-21,42;CL:0000763,2.11e-20,108;CL:0000049,2.11e-20,108;CL:0000473,2.71e-18,48;CL:0000234,2.71e-18,48;CL:0000542,1.23e-16,53;CL:0000051,1.23e-16,53;CL:0000838,1.61e-16,52;CL:0002009,1.71e-16,61;CL:0000557,3.73e-16,67;CL:0002194,1.22e-15,59;CL:0000576,1.22e-15,59;CL:0000040,1.22e-15,59;CL:0000559,1.22e-15,59;CL:0000766,1.96e-15,72;CL:0000839,1.39e-13,66;CL:0000945,3.80e-09,24;CL:0000826,3.80e-09,24;CL:0000084,4.50e-07,25;CL:0000827,4.50e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;5.67e-16;42!CL:0000051;4.86e-10;53!CL:0000049;7.13e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.14e-09!51;DOID:0060083!2.14e-09!51;DOID:162!1.00e-07!235;DOID:1240!2.52e-07!39;DOID:14566!5.14e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.73e-09,51;DOID:0060083,1.73e-09,51;DOID:1240,2.15e-07,39;DOID:162,2.88e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-16!102;UBERON:0003061!2.37e-16!102;UBERON:0002193!7.63e-14!112;UBERON:0001474!1.83e-13!86;UBERON:0002371!2.25e-12!80;UBERON:0002405!6.68e-10!115;UBERON:0004765!1.38e-08!101;UBERON:0001434!1.38e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.77e-16,98;UBERON:0003061,2.77e-16,98;UBERON:0002193,6.41e-14,108;UBERON:0001474,2.25e-13,82;UBERON:0002371,2.83e-12,76;UBERON:0002405,2.17e-11,93;UBERON:0004765,5.74e-11,90;UBERON:0001434,4.07e-08,100 | |||
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| ||
|short_description=p3@SMEK1 | |short_description=p3@SMEK1 | ||
}} | }} |
Latest revision as of 13:39, 16 September 2015
Short description: | p3@SMEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMEK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000557018_5end |
EntrezGene: | SMEK1 |
HGNC: | 20219 |
UniProt: | G3V231 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.50e-41 | 168 |
hematopoietic oligopotent progenitor cell | 5.57e-38 | 161 |
hematopoietic multipotent progenitor cell | 5.57e-38 | 161 |
hematopoietic cell | 5.19e-37 | 177 |
leukocyte | 6.26e-36 | 136 |
nongranular leukocyte | 4.07e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 8.38e-31 | 120 |
classical monocyte | 1.96e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-21 | 42 |
myeloid cell | 2.11e-20 | 108 |
common myeloid progenitor | 2.11e-20 | 108 |
defensive cell | 2.71e-18 | 48 |
phagocyte | 2.71e-18 | 48 |
lymphocyte | 1.23e-16 | 53 |
common lymphoid progenitor | 1.23e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.61e-16 | 52 |
macrophage dendritic cell progenitor | 1.71e-16 | 61 |
granulocyte monocyte progenitor cell | 3.73e-16 | 67 |
monopoietic cell | 1.22e-15 | 59 |
monocyte | 1.22e-15 | 59 |
monoblast | 1.22e-15 | 59 |
promonocyte | 1.22e-15 | 59 |
myeloid leukocyte | 1.96e-15 | 72 |
myeloid lineage restricted progenitor cell | 1.39e-13 | 66 |
lymphocyte of B lineage | 3.80e-09 | 24 |
pro-B cell | 3.80e-09 | 24 |
T cell | 4.50e-07 | 25 |
pro-T cell | 4.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.77e-16 | 98 |
blood island | 2.77e-16 | 98 |
hemolymphoid system | 6.41e-14 | 108 |
bone element | 2.25e-13 | 82 |
bone marrow | 2.83e-12 | 76 |
immune system | 2.17e-11 | 93 |
skeletal element | 5.74e-11 | 90 |
skeletal system | 4.07e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.73e-09 | 51 |
immune system cancer | 1.73e-09 | 51 |
leukemia | 2.15e-07 | 39 |
cancer | 2.88e-07 | 235 |