FFCP PHASE1:Hg19::chr10:89705236..89705239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000395256_5end | |association_with_transcript=-19bp_to_ENST00000395256_5end | ||
|cluster_id=chr10:89705236..89705239,+ | |||
|coexpression_cluster_id=C1598 | |||
|description=CAGE_peak_1_at_ENST00000395256_5end | |description=CAGE_peak_1_at_ENST00000395256_5end | ||
|id=chr10:89705236..89705239,+ | |id=chr10:89705236..89705239,+ | ||
|ontology_enrichment_celltype=CL:0002031!1.28e-23!124;CL:0002087!3.25e-21!119;CL:0002032!1.67e-19!165;CL:0000837!1.67e-19!165;CL:0000037!5.82e-19!172;CL:0000566!5.82e-19!172;CL:0000738!1.32e-18!140;CL:0000860!4.29e-16!45;CL:0002057!9.94e-16!42;CL:0000988!3.64e-15!182;CL:0000839!2.55e-13!70;CL:0002009!2.20e-12!65;CL:0000557!2.76e-12!71;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0000763!3.42e-10!112;CL:0000049!3.42e-10!112;CL:0000542!6.71e-10!53;CL:0000051!6.71e-10!53;CL:0000838!8.79e-10!52;CL:0000766!4.80e-09!76 | |ontology_enrichment_celltype=CL:0002031!1.28e-23!124;CL:0002087!3.25e-21!119;CL:0002032!1.67e-19!165;CL:0000837!1.67e-19!165;CL:0000037!5.82e-19!172;CL:0000566!5.82e-19!172;CL:0000738!1.32e-18!140;CL:0000860!4.29e-16!45;CL:0002057!9.94e-16!42;CL:0000988!3.64e-15!182;CL:0000839!2.55e-13!70;CL:0002009!2.20e-12!65;CL:0000557!2.76e-12!71;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0000763!3.42e-10!112;CL:0000049!3.42e-10!112;CL:0000542!6.71e-10!53;CL:0000051!6.71e-10!53;CL:0000838!8.79e-10!52;CL:0000766!4.80e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-12;33!CL:0002057;1.13e-12;33!CL:0000576;5.58e-10;48!CL:0000473;1.18e-08;39!CL:0000234;1.18e-08;39!CL:0002087;2.82e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.82e-23,120;CL:0002087,9.63e-21,115;CL:0002032,5.20e-19,161;CL:0000837,5.20e-19,161;CL:0000037,1.83e-18,168;CL:0000738,3.97e-18,136;CL:0000860,9.93e-16,42;CL:0002057,9.93e-16,42;CL:0000988,3.46e-15,177;CL:0000473,2.18e-13,48;CL:0000234,2.18e-13,48;CL:0000839,6.38e-13,66;CL:0002009,5.45e-12,61;CL:0000557,6.92e-12,67;CL:0002194,2.92e-11,59;CL:0000576,2.92e-11,59;CL:0000040,2.92e-11,59;CL:0000559,2.92e-11,59;CL:0000542,6.71e-10,53;CL:0000051,6.71e-10,53;CL:0000838,8.79e-10,52;CL:0000763,8.90e-10,108;CL:0000049,8.90e-10,108;CL:0000766,1.22e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.24e-10!86;UBERON:0002371!3.88e-10!80;UBERON:0004765!2.43e-09!101;UBERON:0001434!2.43e-09!101;UBERON:0002390!1.82e-08!102;UBERON:0003061!1.82e-08!102;UBERON:0002193!3.59e-08!112;UBERON:0002405!6.11e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.95e-10,82;UBERON:0002371,1.02e-09,76;UBERON:0002405,1.83e-09,93;UBERON:0004765,4.87e-09,90;UBERON:0001434,2.38e-08,100;UBERON:0002390,4.69e-08,98;UBERON:0003061,4.69e-08,98;UBERON:0002193,9.47e-08,108 | |||
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| ||
|short_description=p1@ENST00000395256 | |short_description=p1@ENST00000395256 | ||
}} | }} |
Latest revision as of 16:26, 23 July 2015
Short description: | p1@ENST00000395256 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000395256_5end |
Coexpression cluster: | C1598_CD34_CD133_CD4_CD8_Smooth_Cardiac_acute |
Association with transcript: | -19bp_to_ENST00000395256_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.82e-23 | 120 |
nongranular leukocyte | 9.63e-21 | 115 |
hematopoietic oligopotent progenitor cell | 5.20e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.20e-19 | 161 |
hematopoietic stem cell | 1.83e-18 | 168 |
leukocyte | 3.97e-18 | 136 |
classical monocyte | 9.93e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.93e-16 | 42 |
hematopoietic cell | 3.46e-15 | 177 |
defensive cell | 2.18e-13 | 48 |
phagocyte | 2.18e-13 | 48 |
myeloid lineage restricted progenitor cell | 6.38e-13 | 66 |
macrophage dendritic cell progenitor | 5.45e-12 | 61 |
granulocyte monocyte progenitor cell | 6.92e-12 | 67 |
monopoietic cell | 2.92e-11 | 59 |
monocyte | 2.92e-11 | 59 |
monoblast | 2.92e-11 | 59 |
promonocyte | 2.92e-11 | 59 |
lymphocyte | 6.71e-10 | 53 |
common lymphoid progenitor | 6.71e-10 | 53 |
lymphoid lineage restricted progenitor cell | 8.79e-10 | 52 |
myeloid cell | 8.90e-10 | 108 |
common myeloid progenitor | 8.90e-10 | 108 |
myeloid leukocyte | 1.22e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.95e-10 | 82 |
bone marrow | 1.02e-09 | 76 |
immune system | 1.83e-09 | 93 |
skeletal element | 4.87e-09 | 90 |
skeletal system | 2.38e-08 | 100 |
hematopoietic system | 4.69e-08 | 98 |
blood island | 4.69e-08 | 98 |
hemolymphoid system | 9.47e-08 | 108 |