FFCP PHASE1:Hg19::chr11:102195211..102195230,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=330 | |EntrezGene=330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=591 | |HGNC=591 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-463bp_to_ENST00000532609_5end | |association_with_transcript=-463bp_to_ENST00000532609_5end | ||
|cluster_id=chr11:102195211..102195230,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_5_at_BIRC3_5end | |description=CAGE_peak_5_at_BIRC3_5end | ||
|id=chr11:102195211..102195230,+ | |id=chr11:102195211..102195230,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.74e-25!140;CL:0002031!2.77e-23!124;CL:0002087!2.78e-21!119;CL:0002032!1.67e-19!165;CL:0000837!1.67e-19!165;CL:0000988!4.42e-19!182;CL:0002057!6.95e-19!42;CL:0000037!4.83e-18!172;CL:0000566!4.83e-18!172;CL:0000860!4.04e-17!45;CL:0000945!1.39e-14!24;CL:0000826!1.39e-14!24;CL:0000557!6.00e-13!71;CL:0000839!3.35e-12!70;CL:0000542!9.96e-12!53;CL:0000051!9.96e-12!53;CL:0000766!1.29e-11!76;CL:0002009!2.17e-11!65;CL:0002194!6.09e-11!63;CL:0000576!6.09e-11!63;CL:0000040!6.09e-11!63;CL:0000559!6.09e-11!63;CL:0000838!6.87e-11!52;CL:0000763!5.61e-09!112;CL:0000049!5.61e-09!112 | |ontology_enrichment_celltype=CL:0000738!8.74e-25!140;CL:0002031!2.77e-23!124;CL:0002087!2.78e-21!119;CL:0002032!1.67e-19!165;CL:0000837!1.67e-19!165;CL:0000988!4.42e-19!182;CL:0002057!6.95e-19!42;CL:0000037!4.83e-18!172;CL:0000566!4.83e-18!172;CL:0000860!4.04e-17!45;CL:0000945!1.39e-14!24;CL:0000826!1.39e-14!24;CL:0000557!6.00e-13!71;CL:0000839!3.35e-12!70;CL:0000542!9.96e-12!53;CL:0000051!9.96e-12!53;CL:0000766!1.29e-11!76;CL:0002009!2.17e-11!65;CL:0002194!6.09e-11!63;CL:0000576!6.09e-11!63;CL:0000040!6.09e-11!63;CL:0000559!6.09e-11!63;CL:0000838!6.87e-11!52;CL:0000763!5.61e-09!112;CL:0000049!5.61e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.66e-16;33!CL:0002057;4.66e-16;33!CL:0000453;6.74e-15;5!CL:0000236;1.74e-14;13!CL:0000473;2.83e-12;39!CL:0000234;2.83e-12;39!CL:0000990;1.69e-08;8!CL:0000576;2.90e-08;48!CL:0000945;9.02e-08;24!CL:0000738;2.96e-07;136!CL:0000451;4.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.92e-17,136;CL:0000988,1.76e-15,177;CL:0000453,7.24e-15,5;CL:0002032,8.41e-14,161;CL:0000837,8.41e-14,161;CL:0000860,1.28e-13,42;CL:0002057,1.28e-13,42;CL:0000236,1.71e-13,14;CL:0002031,2.39e-13,120;CL:0000037,4.38e-13,168;CL:0002087,3.93e-12,115;CL:0000473,9.52e-12,48;CL:0000234,9.52e-12,48;CL:0000839,5.19e-10,66;CL:0000557,7.70e-10,67;CL:0000763,9.24e-10,108;CL:0000049,9.24e-10,108;CL:0002194,3.98e-09,59;CL:0000576,3.98e-09,59;CL:0000040,3.98e-09,59;CL:0000559,3.98e-09,59;CL:0000766,4.69e-09,72;CL:0002009,8.66e-09,61;CL:0000990,1.76e-08,8;CL:0000945,8.44e-08,24;CL:0000826,8.44e-08,24;CL:0000451,5.10e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.90e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.93e-14!102;UBERON:0003061!3.93e-14!102;UBERON:0002193!1.06e-13!112;UBERON:0002371!1.36e-10!80;UBERON:0001474!2.58e-09!86;UBERON:0002405!5.54e-08!115;UBERON:0004765!7.51e-07!101;UBERON:0001434!7.51e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.48e-09,98;UBERON:0003061,3.48e-09,98;UBERON:0002371,1.68e-08,76;UBERON:0002193,3.78e-08,108;UBERON:0001474,9.05e-08,82;UBERON:0004765,6.03e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.393553906568396,0.393364276848904,0,0,0,0,0,0.232401601740905,0.710846162437108,0,0,0,0,0,0,0,0,0,0,1.39457422143411,0.411167888021826,0.619412741790207,0.575384784644301,0.768482119587302,0,0.689491361473237,0,1.35426486594342,1.69418105588344,0.272906150057846,0.449446968890169,2.14258724659632,0,0.639337125799041,0,0.598390972864896,0.426224750532694,6.38460324982885,2.8369261234557,0,1.50749199154046,3.12889751052121,0,4.23779651843358,0.736555271975129,0.949387162322653,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,1.63841583378639,1.77901850772711,2.98711155796555,0.400395987036012,1.14950487990897,1.32208974556972,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,1.89379122293893,1.94826728407911,0.779873198196215,0.589211814949674,1.10766947291811,0.541607727530031,0.512365278902701,0.390178042679635,0.164437904603676,0,0,0.296573126324121,0,0,0.113309342697566,0,1.03088233644789,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,14.7798971368783,0.088048434013226,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0.246169610922139,0.622079175323615,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.816164040795739,0,0,0,0,0,3.26173241548684,0.988511511572023,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0.730755590285376,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0,2.14346339723327,2.5244319659539,6.70618116448961,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0.236387681767936,0,0,0,0,0,0.647782773655864,2.8665101273223,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.393553906568396,0.393364276848904,0,0,0,0,0,0.232401601740905,0.710846162437108,0,0,0,0,0,0,0,0,0,0,1.39457422143411,0.411167888021826,0.619412741790207,0.575384784644301,0.768482119587302,0,0.689491361473237,0,1.35426486594342,1.69418105588344,0.272906150057846,0.449446968890169,2.14258724659632,0,0.639337125799041,0,0.598390972864896,0.426224750532694,6.38460324982885,2.8369261234557,0,1.50749199154046,3.12889751052121,0,4.23779651843358,0.736555271975129,0.949387162322653,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,1.63841583378639,1.77901850772711,2.98711155796555,0.400395987036012,1.14950487990897,1.32208974556972,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,1.89379122293893,1.94826728407911,0.779873198196215,0.589211814949674,1.10766947291811,0.541607727530031,0.512365278902701,0.390178042679635,0.164437904603676,0,0,0.296573126324121,0,0,0.113309342697566,0,1.03088233644789,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,14.7798971368783,0.088048434013226,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0.246169610922139,0.622079175323615,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.816164040795739,0,0,0,0,0,3.26173241548684,0.988511511572023,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0.730755590285376,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0,2.14346339723327,2.5244319659539,6.70618116448961,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0.236387681767936,0,0,0,0,0,0.647782773655864,2.8665101273223,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p5@BIRC3 | |short_description=p5@BIRC3 | ||
}} | }} |
Latest revision as of 17:00, 24 September 2015
Short description: | p5@BIRC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BIRC3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -463bp_to_ENST00000532609_5end |
EntrezGene: | BIRC3 |
HGNC: | 591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.92e-17 | 136 |
hematopoietic cell | 1.76e-15 | 177 |
Langerhans cell | 7.24e-15 | 5 |
hematopoietic oligopotent progenitor cell | 8.41e-14 | 161 |
hematopoietic multipotent progenitor cell | 8.41e-14 | 161 |
classical monocyte | 1.28e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-13 | 42 |
B cell | 1.71e-13 | 14 |
hematopoietic lineage restricted progenitor cell | 2.39e-13 | 120 |
hematopoietic stem cell | 4.38e-13 | 168 |
nongranular leukocyte | 3.93e-12 | 115 |
defensive cell | 9.52e-12 | 48 |
phagocyte | 9.52e-12 | 48 |
myeloid lineage restricted progenitor cell | 5.19e-10 | 66 |
granulocyte monocyte progenitor cell | 7.70e-10 | 67 |
myeloid cell | 9.24e-10 | 108 |
common myeloid progenitor | 9.24e-10 | 108 |
monopoietic cell | 3.98e-09 | 59 |
monocyte | 3.98e-09 | 59 |
monoblast | 3.98e-09 | 59 |
promonocyte | 3.98e-09 | 59 |
myeloid leukocyte | 4.69e-09 | 72 |
macrophage dendritic cell progenitor | 8.66e-09 | 61 |
conventional dendritic cell | 1.76e-08 | 8 |
lymphocyte of B lineage | 8.44e-08 | 24 |
pro-B cell | 8.44e-08 | 24 |
dendritic cell | 5.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.48e-09 | 98 |
blood island | 3.48e-09 | 98 |
bone marrow | 1.68e-08 | 76 |
hemolymphoid system | 3.78e-08 | 108 |
bone element | 9.05e-08 | 82 |
skeletal element | 6.03e-07 | 90 |