FFCP PHASE1:Hg19::chr11:102668016..102668028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |EntrezGene=4312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7155 | |HGNC=7155 | ||
|TSSclassifier=strong | |||
|UniProt=A5GZ69 | |UniProt=A5GZ69 | ||
|association_with_transcript=41bp_to_DQ399597_5end | |association_with_transcript=41bp_to_DQ399597_5end | ||
|cluster_id=chr11:102668016..102668028,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_5_at_MMP1_5end | |description=CAGE_peak_5_at_MMP1_5end | ||
|id=chr11:102668016..102668028,- | |id=chr11:102668016..102668028,- | ||
|ontology_enrichment_celltype=CL:0000359!7.28e-26!32;CL:0000192!1.68e-21!42;CL:0000514!1.68e-21!42;CL:0000055!3.39e-16!180;CL:0000187!6.01e-15!54;CL:0000222!1.26e-14!119;CL:0000183!3.91e-14!59;CL:0000680!9.32e-14!57;CL:0000056!9.32e-14!57;CL:0000355!9.32e-14!57;CL:0000393!1.08e-12!60;CL:0000211!1.08e-12!60;CL:0002139!1.60e-12!24;CL:0000071!1.91e-11!18;CL:0002546!1.91e-11!18;CL:0002539!6.58e-11!10;CL:0000220!1.52e-10!246;CL:0002321!2.46e-10!248;CL:0002494!5.36e-10!16;CL:0000057!1.10e-09!75;CL:0002371!1.34e-09!591;CL:1000413!1.07e-08!9;CL:0000115!2.04e-08!35;CL:0000548!4.55e-08!679;CL:0000004!4.55e-08!679;CL:0000255!4.55e-08!679;CL:1000306!5.01e-08!4;CL:0002547!5.01e-08!4;CL:0002594!5.67e-08!4;CL:0000012!6.64e-08!682;CL:0000144!1.35e-07!625;CL:0000048!1.55e-07!430;CL:0000723!3.65e-07!436;CL:0002595!4.30e-07!5;CL:0002544!4.39e-07!6;CL:0002592!6.53e-07!3 | |ontology_enrichment_celltype=CL:0000359!7.28e-26!32;CL:0000192!1.68e-21!42;CL:0000514!1.68e-21!42;CL:0000055!3.39e-16!180;CL:0000187!6.01e-15!54;CL:0000222!1.26e-14!119;CL:0000183!3.91e-14!59;CL:0000680!9.32e-14!57;CL:0000056!9.32e-14!57;CL:0000355!9.32e-14!57;CL:0000393!1.08e-12!60;CL:0000211!1.08e-12!60;CL:0002139!1.60e-12!24;CL:0000071!1.91e-11!18;CL:0002546!1.91e-11!18;CL:0002539!6.58e-11!10;CL:0000220!1.52e-10!246;CL:0002321!2.46e-10!248;CL:0002494!5.36e-10!16;CL:0000057!1.10e-09!75;CL:0002371!1.34e-09!591;CL:1000413!1.07e-08!9;CL:0000115!2.04e-08!35;CL:0000548!4.55e-08!679;CL:0000004!4.55e-08!679;CL:0000255!4.55e-08!679;CL:1000306!5.01e-08!4;CL:0002547!5.01e-08!4;CL:0002594!5.67e-08!4;CL:0000012!6.64e-08!682;CL:0000144!1.35e-07!625;CL:0000048!1.55e-07!430;CL:0000723!3.65e-07!436;CL:0002595!4.30e-07!5;CL:0002544!4.39e-07!6;CL:0002592!6.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.04e-43;32!CL:0000192;7.82e-25;43!CL:0002594;4.60e-15;4!CL:0002494;1.89e-14;16!CL:0002595;6.72e-14;5!CL:0002539;1.25e-13;10!CL:0002592;5.34e-13;3!CL:0000187;3.06e-12;55!CL:0000393;1.16e-10;61!CL:0000211;1.16e-10;61!CL:1000413;5.19e-10;9!CL:0000569;1.67e-09;4!CL:0002593;1.72e-09;2!CL:1000306;1.82e-09;4!CL:0002547;1.82e-09;4!CL:0000071;3.36e-09;18!CL:0002139;1.28e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.92e-45,32;CL:0000192,2.73e-35,43;CL:0000514,2.73e-35,43;CL:0000187,2.05e-26,55;CL:0000680,9.03e-25,58;CL:0000056,9.03e-25,58;CL:0000355,9.03e-25,58;CL:0000393,2.73e-23,61;CL:0000211,2.73e-23,61;CL:0000222,1.12e-19,121;CL:0002594,2.83e-15,4;CL:0002494,1.78e-14,16;CL:0002595,6.74e-14,5;CL:0002539,1.11e-13,10;CL:0002592,5.14e-13,3;CL:0002321,1.37e-10,250;CL:1000413,7.00e-10,9;CL:0000569,1.35e-09,4;CL:0000011,1.35e-09,4;CL:1000306,1.47e-09,4;CL:0002547,1.47e-09,4;CL:0002593,1.73e-09,2;CL:0000071,4.49e-09,18;CL:0002546,4.49e-09,18;CL:0002139,1.74e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000514;7.82e-25;43!CL:0000355;2.23e-11;58!CL:0000011;1.67e-09;4!CL:0002546;3.36e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.91e-45!42;UBERON:0003509!1.91e-45!42;UBERON:0004572!1.91e-45!42;UBERON:0001981!1.60e-40!60;UBERON:0007500!1.60e-40!60;UBERON:0004537!1.60e-40!60;UBERON:0006965!1.60e-40!60;UBERON:0000055!3.77e-39!69;UBERON:0004872!3.34e-37!84;UBERON:0004573!6.43e-35!33;UBERON:0004571!6.43e-35!33;UBERON:0002049!2.35e-32!79;UBERON:0007798!2.35e-32!79;UBERON:0004535!1.04e-28!110;UBERON:0003914!8.99e-28!118;UBERON:0001009!1.60e-27!113;UBERON:0000947!3.54e-21!21;UBERON:0010191!3.54e-21!21;UBERON:0000914!1.08e-15!83;UBERON:0002329!1.08e-15!83;UBERON:0003077!1.08e-15!83;UBERON:0003059!1.08e-15!83;UBERON:0007282!1.08e-15!83;UBERON:0009618!1.08e-15!83;UBERON:0007285!1.08e-15!83;UBERON:0004290!2.00e-15!70;UBERON:0000490!7.25e-15!138;UBERON:0000486!8.11e-13!82;UBERON:0004111!1.60e-12!241;UBERON:0001134!2.32e-12!61;UBERON:0002036!2.32e-12!61;UBERON:0003082!2.32e-12!61;UBERON:0000025!5.19e-12!194;UBERON:0002385!9.83e-12!63;UBERON:0001015!9.83e-12!63;UBERON:0000383!9.83e-12!63;UBERON:0001986!1.91e-11!18;UBERON:0004638!1.91e-11!18;UBERON:0004852!1.91e-11!18;UBERON:0000477!3.81e-11!286;UBERON:0004237!6.58e-11!10;UBERON:0004695!6.58e-11!10;UBERON:0002111!6.58e-11!10;UBERON:0004178!6.58e-11!10;UBERON:0000487!2.72e-10!22;UBERON:0003498!2.21e-09!5;UBERON:0005985!2.21e-09!5;UBERON:0003081!5.76e-09!216;UBERON:0000483!9.66e-09!309;UBERON:0003915!1.07e-08!9;UBERON:0004700!1.07e-08!9;UBERON:0001917!1.07e-08!9;UBERON:0006914!1.16e-08!25;UBERON:0000119!1.69e-08!312;UBERON:0005256!1.83e-08!143;UBERON:0000948!2.15e-08!24;UBERON:0005498!2.15e-08!24;UBERON:0004140!2.15e-08!24;UBERON:0009881!2.15e-08!24;UBERON:0004141!2.15e-08!24;UBERON:0003084!2.15e-08!24;UBERON:0007005!2.15e-08!24;UBERON:0004139!2.15e-08!24;UBERON:0004291!2.15e-08!24;UBERON:0000415!5.01e-08!4;UBERON:0007240!5.01e-08!4;UBERON:0005742!5.01e-08!4;UBERON:0005734!5.01e-08!4;UBERON:0004664!5.01e-08!4;UBERON:0004663!5.01e-08!4;UBERON:0001310!5.67e-08!4;UBERON:0007100!3.95e-07!27;UBERON:0003834!4.30e-07!5;UBERON:0001533!4.30e-07!5;UBERON:0001621!6.53e-07!3 | |ontology_enrichment_uberon=UBERON:0001637!1.91e-45!42;UBERON:0003509!1.91e-45!42;UBERON:0004572!1.91e-45!42;UBERON:0001981!1.60e-40!60;UBERON:0007500!1.60e-40!60;UBERON:0004537!1.60e-40!60;UBERON:0006965!1.60e-40!60;UBERON:0000055!3.77e-39!69;UBERON:0004872!3.34e-37!84;UBERON:0004573!6.43e-35!33;UBERON:0004571!6.43e-35!33;UBERON:0002049!2.35e-32!79;UBERON:0007798!2.35e-32!79;UBERON:0004535!1.04e-28!110;UBERON:0003914!8.99e-28!118;UBERON:0001009!1.60e-27!113;UBERON:0000947!3.54e-21!21;UBERON:0010191!3.54e-21!21;UBERON:0000914!1.08e-15!83;UBERON:0002329!1.08e-15!83;UBERON:0003077!1.08e-15!83;UBERON:0003059!1.08e-15!83;UBERON:0007282!1.08e-15!83;UBERON:0009618!1.08e-15!83;UBERON:0007285!1.08e-15!83;UBERON:0004290!2.00e-15!70;UBERON:0000490!7.25e-15!138;UBERON:0000486!8.11e-13!82;UBERON:0004111!1.60e-12!241;UBERON:0001134!2.32e-12!61;UBERON:0002036!2.32e-12!61;UBERON:0003082!2.32e-12!61;UBERON:0000025!5.19e-12!194;UBERON:0002385!9.83e-12!63;UBERON:0001015!9.83e-12!63;UBERON:0000383!9.83e-12!63;UBERON:0001986!1.91e-11!18;UBERON:0004638!1.91e-11!18;UBERON:0004852!1.91e-11!18;UBERON:0000477!3.81e-11!286;UBERON:0004237!6.58e-11!10;UBERON:0004695!6.58e-11!10;UBERON:0002111!6.58e-11!10;UBERON:0004178!6.58e-11!10;UBERON:0000487!2.72e-10!22;UBERON:0003498!2.21e-09!5;UBERON:0005985!2.21e-09!5;UBERON:0003081!5.76e-09!216;UBERON:0000483!9.66e-09!309;UBERON:0003915!1.07e-08!9;UBERON:0004700!1.07e-08!9;UBERON:0001917!1.07e-08!9;UBERON:0006914!1.16e-08!25;UBERON:0000119!1.69e-08!312;UBERON:0005256!1.83e-08!143;UBERON:0000948!2.15e-08!24;UBERON:0005498!2.15e-08!24;UBERON:0004140!2.15e-08!24;UBERON:0009881!2.15e-08!24;UBERON:0004141!2.15e-08!24;UBERON:0003084!2.15e-08!24;UBERON:0007005!2.15e-08!24;UBERON:0004139!2.15e-08!24;UBERON:0004291!2.15e-08!24;UBERON:0000415!5.01e-08!4;UBERON:0007240!5.01e-08!4;UBERON:0005742!5.01e-08!4;UBERON:0005734!5.01e-08!4;UBERON:0004664!5.01e-08!4;UBERON:0004663!5.01e-08!4;UBERON:0001310!5.67e-08!4;UBERON:0007100!3.95e-07!27;UBERON:0003834!4.30e-07!5;UBERON:0001533!4.30e-07!5;UBERON:0001621!6.53e-07!3 | ||
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|short_description=p5@MMP1 | |short_description=p5@MMP1 | ||
}} | }} |
Latest revision as of 18:21, 24 September 2015
Short description: | p5@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | 41bp_to_DQ399597_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | A5GZ69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.92e-45 | 32 |
smooth muscle cell | 2.73e-35 | 43 |
smooth muscle myoblast | 2.73e-35 | 43 |
muscle cell | 2.05e-26 | 55 |
muscle precursor cell | 9.03e-25 | 58 |
myoblast | 9.03e-25 | 58 |
multi-potent skeletal muscle stem cell | 9.03e-25 | 58 |
electrically responsive cell | 2.73e-23 | 61 |
electrically active cell | 2.73e-23 | 61 |
mesodermal cell | 1.12e-19 | 121 |
smooth muscle cell of the umbilical artery | 2.83e-15 | 4 |
cardiocyte | 1.78e-14 | 16 |
smooth muscle cell of the subclavian artery | 6.74e-14 | 5 |
aortic smooth muscle cell | 1.11e-13 | 10 |
smooth muscle cell of the coronary artery | 5.14e-13 | 3 |
embryonic cell | 1.37e-10 | 250 |
endothelial cell of artery | 7.00e-10 | 9 |
cardiac mesenchymal cell | 1.35e-09 | 4 |
migratory trunk neural crest cell | 1.35e-09 | 4 |
fibroblast of tunica adventitia of artery | 1.47e-09 | 4 |
fibroblast of the aortic adventitia | 1.47e-09 | 4 |
smooth muscle cell of the internal thoracic artery | 1.73e-09 | 2 |
blood vessel endothelial cell | 4.49e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.49e-09 | 18 |
endothelial cell of vascular tree | 1.74e-08 | 24 |