FFCP PHASE1:Hg19::chr15:57212033..57212047,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6938 | |EntrezGene=6938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11623 | |HGNC=11623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=318bp_to_ENST00000561152_5end | |association_with_transcript=318bp_to_ENST00000561152_5end | ||
|cluster_id=chr15:57212033..57212047,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_25_at_TCF12_5end | |description=CAGE_peak_25_at_TCF12_5end | ||
|id=chr15:57212033..57212047,+ | |id=chr15:57212033..57212047,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.03e-21!57;UBERON:0005068!9.03e-21!57;UBERON:0006241!9.03e-21!57;UBERON:0007135!9.03e-21!57;UBERON:0001017!2.38e-19!82;UBERON:0005743!3.38e-19!86;UBERON:0002780!1.55e-18!41;UBERON:0001890!1.55e-18!41;UBERON:0006240!1.55e-18!41;UBERON:0002616!4.21e-18!59;UBERON:0003080!5.96e-18!42;UBERON:0002346!1.07e-17!90;UBERON:0001893!9.26e-17!34;UBERON:0003075!1.68e-16!86;UBERON:0007284!1.68e-16!86;UBERON:0000073!1.82e-16!94;UBERON:0001016!1.82e-16!94;UBERON:0000955!1.68e-15!69;UBERON:0006238!1.68e-15!69;UBERON:0002791!1.78e-15!33;UBERON:0002020!3.55e-15!34;UBERON:0003528!3.55e-15!34;UBERON:0001869!1.58e-14!32;UBERON:0003056!5.39e-14!61;UBERON:0007023!4.04e-13!115;UBERON:0000153!4.29e-12!129;UBERON:0007811!4.29e-12!129;UBERON:0000033!2.70e-10!123;UBERON:0000956!1.63e-09!25;UBERON:0000203!1.63e-09!25;UBERON:0002619!1.82e-09!22;UBERON:0001950!1.15e-08!20;UBERON:0000924!2.89e-08!173;UBERON:0006601!2.89e-08!173;UBERON:0002420!1.19e-07!9;UBERON:0007245!1.19e-07!9;UBERON:0010009!1.19e-07!9;UBERON:0010011!1.19e-07!9;UBERON:0000454!1.19e-07!9;UBERON:0002308!1.25e-07!9;UBERON:0000125!1.25e-07!9;UBERON:0004121!1.71e-07!169;UBERON:0009663!4.83e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.60e-131;2!UBERON:0005058;4.60e-131;2!UBERON:0009113;4.60e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0001875;7.04e-34;2!UBERON:0006514;7.04e-34;2!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0009663;9.89e-11;7!UBERON:0002420;1.21e-08;9!UBERON:0000125;1.21e-08;9!UBERON:0007245;1.21e-08;9!UBERON:0002308;1.21e-08;9!UBERON:0010009;1.21e-08;9!UBERON:0010011;1.21e-08;9!UBERON:0000454;1.21e-08;9!UBERON:0002368;2.43e-07;33!UBERON:0002390;2.43e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0001875,7.05e-34,2;UBERON:0006514,7.05e-34,2;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0009663,9.89e-11,7;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0002420,1.21e-08,9;UBERON:0000125,1.21e-08,9;UBERON:0007245,1.21e-08,9;UBERON:0002308,1.21e-08,9;UBERON:0010009,1.21e-08,9;UBERON:0010011,1.21e-08,9;UBERON:0000454,1.21e-08,9;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
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| ||
|short_description=p25@TCF12 | |short_description=p25@TCF12 | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p25@TCF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_TCF12_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 318bp_to_ENST00000561152_5end |
EntrezGene: | TCF12 |
HGNC: | 11623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
globus pallidus | 7.05e-34 | 2 |
pallidum | 7.05e-34 | 2 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
telencephalic nucleus | 9.89e-11 | 7 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
basal ganglion | 1.21e-08 | 9 |
neural nucleus | 1.21e-08 | 9 |
nuclear complex of neuraxis | 1.21e-08 | 9 |
nucleus of brain | 1.21e-08 | 9 |
aggregate regional part of brain | 1.21e-08 | 9 |
collection of basal ganglia | 1.21e-08 | 9 |
cerebral subcortex | 1.21e-08 | 9 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |