FFCP PHASE1:Hg19::chr15:74466169..74466212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3671 | |EntrezGene=3671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6133 | |HGNC=6133 | ||
|TSSclassifier=strong | |||
|UniProt=O14498 | |UniProt=O14498 | ||
|association_with_transcript=82bp_to_NM_005545,uc002axg.1_5end | |association_with_transcript=82bp_to_NM_005545,uc002axg.1_5end | ||
|cluster_id=chr15:74466169..74466212,+ | |||
|coexpression_cluster_id=C1751 | |||
|description=CAGE_peak_4_at_ISLR_5end | |description=CAGE_peak_4_at_ISLR_5end | ||
|id=chr15:74466169..74466212,+ | |id=chr15:74466169..74466212,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.17e-23!180;CL:0000057!1.02e-18!75;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000183!1.57e-10!59;CL:0000187!5.00e-10!54;CL:0002334!2.18e-09!12;CL:0002620!1.00e-08!23;CL:0000393!5.40e-08!60;CL:0000211!5.40e-08!60;CL:0000136!9.38e-08!15;CL:0000192!4.85e-07!42;CL:0000514!4.85e-07!42;CL:0000499!8.85e-07!27;CL:0000327!8.88e-07!14 | |ontology_enrichment_celltype=CL:0000055!6.17e-23!180;CL:0000057!1.02e-18!75;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000183!1.57e-10!59;CL:0000187!5.00e-10!54;CL:0002334!2.18e-09!12;CL:0002620!1.00e-08!23;CL:0000393!5.40e-08!60;CL:0000211!5.40e-08!60;CL:0000136!9.38e-08!15;CL:0000192!4.85e-07!42;CL:0000514!4.85e-07!42;CL:0000499!8.85e-07!27;CL:0000327!8.88e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.24e-10;12!CL:0000136;4.70e-07;13!CL:0002620;5.28e-07;23!CL:0000327;7.48e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.72e-16,76;CL:0002334,2.12e-10,12;CL:0000680,2.01e-09,58;CL:0000056,2.01e-09,58;CL:0000355,2.01e-09,58;CL:0000187,9.46e-09,55;CL:0000136,1.48e-08,15;CL:0002620,5.07e-07,23;CL:0000327,7.16e-07,15;CL:0000393,8.72e-07,61;CL:0000211,8.72e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.39e-17!115;UBERON:0000475!1.67e-15!365;UBERON:0000914!4.36e-13!83;UBERON:0002329!4.36e-13!83;UBERON:0003077!4.36e-13!83;UBERON:0003059!4.36e-13!83;UBERON:0007282!4.36e-13!83;UBERON:0009618!4.36e-13!83;UBERON:0007285!4.36e-13!83;UBERON:0004290!7.83e-13!70;UBERON:0002385!1.49e-12!63;UBERON:0001015!1.49e-12!63;UBERON:0000383!1.49e-12!63;UBERON:0001134!6.95e-12!61;UBERON:0002036!6.95e-12!61;UBERON:0003082!6.95e-12!61;UBERON:0000479!3.63e-10!787;UBERON:0000486!8.74e-10!82;UBERON:0000481!2.35e-09!347;UBERON:0000468!2.96e-09!659;UBERON:0001013!1.28e-08!14;UBERON:0000477!3.02e-08!286;UBERON:0007100!6.12e-08!27;UBERON:0002616!1.57e-07!59;UBERON:0000948!2.50e-07!24;UBERON:0005498!2.50e-07!24;UBERON:0004140!2.50e-07!24;UBERON:0009881!2.50e-07!24;UBERON:0004141!2.50e-07!24;UBERON:0003084!2.50e-07!24;UBERON:0007005!2.50e-07!24;UBERON:0004139!2.50e-07!24;UBERON:0004291!2.50e-07!24;UBERON:0002199!3.66e-07!45;UBERON:0002416!3.66e-07!45;UBERON:0005256!4.62e-07!143;UBERON:0004872!6.88e-07!84;UBERON:0000480!8.40e-07!626;UBERON:0000119!9.61e-07!312;UBERON:0003102!9.76e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.61e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.67e-13,114;UBERON:0000479,1.03e-11,773;UBERON:0002385,2.00e-11,64;UBERON:0001015,2.00e-11,64;UBERON:0000383,2.00e-11,64;UBERON:0001134,1.02e-10,62;UBERON:0002036,1.02e-10,62;UBERON:0003082,1.02e-10,62;UBERON:0003077,1.27e-10,72;UBERON:0007285,1.27e-10,72;UBERON:0002329,2.21e-10,71;UBERON:0003059,2.21e-10,71;UBERON:0007282,2.21e-10,71;UBERON:0004290,2.21e-10,71;UBERON:0009618,2.21e-10,71;UBERON:0007524,2.89e-10,73;UBERON:0001013,1.56e-09,14;UBERON:0007503,1.60e-08,78;UBERON:0000486,2.78e-08,83;UBERON:0007100,2.72e-07,27;UBERON:0004872,3.72e-07,83;UBERON:0002199,3.88e-07,46;UBERON:0002416,3.88e-07,46 | |||
|phase1_expression=31.0670028552652,13.06013195735,37.4938714895283,26.0190575718139,14.3027550216732,34.8935409640147,2.53299878168311,12.6343974685366,8.35794010239483,2.7030733015166,0.697801167972428,0,0,7.4259811776028,16.9012661621237,0.672325146451775,0,0,0,7.75662665883764,5.91602004608334,2.19418305034661,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,24.8159318090345,9.20610445273418,61.8060950577608,49.1311152423172,92.4120790970055,39.764297352555,91.0007207465929,1.41802225746102,1.10864698731282,1.66886092816939,9.49598297358417,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,21.0206649363202,30.4541115870403,178.699214726511,57.1016095339355,12.8955848032731,3.20246987189115,0.49333509683432,13.0708634867902,0,0.817309515567294,47.2235174252186,37.4514350911999,0.234321431833797,0.312160076830321,0,2.83952493048422,0.352303495931295,0.323745888736263,0.280901613404497,1.02077085627447,0.122834317311768,4.13303124703062,1.18800285728205,1.23633464639278,23.6641954103887,8.62341770179486,0.336672227908132,0.125118519871964,2.77064115484183,1.75591048352335,2.75839016219118,4.20666564938471,1.70148274740032,53.8168907066586,43.1385925413506,24.7960324356687,80.7245048467042,31.5340739469623,79.6109268740994,67.9326525610303,149.198277701279,76.8777970721857,40.8942714275465,28.7195683763974,52.2116763524762,80.5871775012715,23.1729825923573,5.59549954624609,0,0,0,0.121973706129595,0,0.464775771478074,0.621966330092223,0.252320850875628,0.36497735907583,21.9029345261742,86.1942857178466,6.90674606762403,15.7885095530873,7.94067429836544,0,0,0,0,0,0,0.134831308160164,0,0,0,0,7.8199062152966,23.5213938216867,0,0,2.95394953340702,0,0,1.54411029268673,0,0,0,0,0,0,0,0.579652024875384,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,10.7645840971546,8.28324130783232,9.6806537283654,0.129271715757778,178.828222925941,4.22651376278,29.7850690575055,24.9617848587279,3.08648849114571,0,1.3321108950805,1.14382394926518,1.62786481617433,0,3.90883421152482,1.42156779497018,0,0.602878754119172,0,0.399891964728228,0,0,0,1.4377491329495,1.14861935834114,4.27910715122155,2.46128221334885,5.75333703141074,3.22309733831812,0,0,0,0,3.04913549066956,1.30139853857622,0.773288812777695,0,0,0,0,0,20.4894791170964,22.5076734476855,3.25518028439683,3.11956292296211,2.3195768543631,0,11.9484243292567,6.92176029373754,4.5481500811197,5.17365356462525,1.32845119707087,1.10621501125022,1.91143951829782,31.5239863515012,20.2454620048405,0,0,0,0,0,2.41912234663744,47.3885912933864,34.375482016526,30.8726103876381,50.999381403769,44.0068234197365,34.9053008881628,84.5982978736449,19.5846311129373,62.5017273102207,19.8747717553418,28.5589936050992,19.6395539597331,0,0,0,8.26664026785169,7.82992022428883,7.6052160676466,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0.325378394664303,6.69766575710195,0,0,0,0,61.0598933407806,3.48014585851639,2.31072925671967,1.84204409671355,0.413509717453592,6.44521469209642,9.57110179833908,1.19317278382541,7.21159488738573,0,0,0,0,4.64845549297286,62.0180323256361,9.0614845120878,8.62494024493049,5.32306030317022,6.95946393660058,22.0535820733665,5.58187058293766,4.83805880167568,0.316379424718726,0.190630193923825,0.511795582622668,0.42793898803392,62.6860398414095,20.40866464518,1.07923474549989,2.19629623788844,1.53156123049392,2.42618977887979,0,0.421258456238981,1.46290121726877,29.976759224648,21.1300293513511,15.6974898119184,5.09059555033366,85.8861686313845,88.769820310926,31.8450708115785,10.5228212460903,3.47265320560013,5.24715801637306,0,6.196469961995,3.94373843545138,0,0,0,15.6094868191063,107.664894001809,73.4327611300581,0,0.699869440489966,0,1.34060455107157,0,7.06078505825844,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9693915406364,0,6.12938613526131,0,0.23874448473769,0.296964680832639,0,0,2.39138007897872,0,0,0,31.481182143669,4.14425873296722,0,0,0,4.97663340258892,0,0,0,14.79651084554,0,0,4.84666373047609,6.12269447868218,0,0,0,14.4999915086959,0,0,0,0,0,0,0.885741385813839,0.120596438625408,1.52581736317083,1.3269511191747,1.18219047581419,4.8264787373874,0,0,36.012720979777,0,0,0,0,19.1400695839152,49.5542980304075,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,4.86516604768365,2.4441205797345,0,0,0,1.07841812769083,13.6438200040794,0,0,0,0,8.2862724598372,3.62972148145992,0.61214552326098,18.260921512633,0,0,0,0,0,0,0,0.277349346026277,0,0,0,14.6770401323305,0,0,0,0,13.190506242425,0,13.5588444468319,0,0,3.03891820588218,0,0,19.4242225212811,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.1369053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| ||
|short_description=p4@ISLR | |short_description=p4@ISLR | ||
}} | }} |
Latest revision as of 00:28, 19 September 2015
Short description: | p4@ISLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ISLR_5end |
Coexpression cluster: | C1751_Mesenchymal_Fibroblast_tenocyte_Smooth_Synoviocyte_Hair_Preadipocyte |
Association with transcript: | 82bp_to_NM_005545, uc002axg.1_5end |
EntrezGene: | ISLR |
HGNC: | 6133 |
UniProt: | O14498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.72e-16 | 76 |
preadipocyte | 2.12e-10 | 12 |
muscle precursor cell | 2.01e-09 | 58 |
myoblast | 2.01e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.01e-09 | 58 |
muscle cell | 9.46e-09 | 55 |
fat cell | 1.48e-08 | 15 |
skin fibroblast | 5.07e-07 | 23 |
extracellular matrix secreting cell | 7.16e-07 | 15 |
electrically responsive cell | 8.72e-07 | 61 |
electrically active cell | 8.72e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.67e-13 | 114 |
tissue | 1.03e-11 | 773 |
muscle tissue | 2.00e-11 | 64 |
musculature | 2.00e-11 | 64 |
musculature of body | 2.00e-11 | 64 |
skeletal muscle tissue | 1.02e-10 | 62 |
striated muscle tissue | 1.02e-10 | 62 |
myotome | 1.02e-10 | 62 |
paraxial mesoderm | 1.27e-10 | 72 |
presumptive paraxial mesoderm | 1.27e-10 | 72 |
somite | 2.21e-10 | 71 |
presomitic mesoderm | 2.21e-10 | 71 |
presumptive segmental plate | 2.21e-10 | 71 |
dermomyotome | 2.21e-10 | 71 |
trunk paraxial mesoderm | 2.21e-10 | 71 |
dense mesenchyme tissue | 2.89e-10 | 73 |
adipose tissue | 1.56e-09 | 14 |
epithelial vesicle | 1.60e-08 | 78 |
multilaminar epithelium | 2.78e-08 | 83 |
primary circulatory organ | 2.72e-07 | 27 |
splanchnic layer of lateral plate mesoderm | 3.72e-07 | 83 |
integument | 3.88e-07 | 46 |
integumental system | 3.88e-07 | 46 |