FFCP PHASE1:Hg19::chr11:13984178..13984191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10418 | |EntrezGene=10418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11252 | |HGNC=11252 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCB6 | |UniProt=Q9HCB6 | ||
|association_with_transcript=0bp_to_ENST00000533633,NM_006108_5end | |association_with_transcript=0bp_to_ENST00000533633,NM_006108_5end | ||
|cluster_id=chr11:13984178..13984191,+ | |||
|description=CAGE_peak_3_at_SPON1_5end | |description=CAGE_peak_3_at_SPON1_5end | ||
|id=chr11:13984178..13984191,+ | |id=chr11:13984178..13984191,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-50!115;UBERON:0001049!3.29e-29!57;UBERON:0005068!3.29e-29!57;UBERON:0006241!3.29e-29!57;UBERON:0007135!3.29e-29!57;UBERON:0001017!1.04e-25!82;UBERON:0005743!3.99e-25!86;UBERON:0003075!9.08e-25!86;UBERON:0007284!9.08e-25!86;UBERON:0000955!1.27e-24!69;UBERON:0006238!1.27e-24!69;UBERON:0002780!1.18e-23!41;UBERON:0001890!1.18e-23!41;UBERON:0006240!1.18e-23!41;UBERON:0002616!2.15e-23!59;UBERON:0002346!6.25e-23!90;UBERON:0003080!7.65e-23!42;UBERON:0000073!1.91e-22!94;UBERON:0001016!1.91e-22!94;UBERON:0002020!6.29e-19!34;UBERON:0003528!6.29e-19!34;UBERON:0001893!6.46e-19!34;UBERON:0002791!5.10e-18!33;UBERON:0000033!8.58e-18!123;UBERON:0001869!3.41e-17!32;UBERON:0000153!5.73e-17!129;UBERON:0007811!5.73e-17!129;UBERON:0003056!8.15e-17!61;UBERON:0004121!1.01e-14!169;UBERON:0002619!1.30e-14!22;UBERON:0000924!5.97e-14!173;UBERON:0006601!5.97e-14!173;UBERON:0001950!5.93e-13!20;UBERON:0000064!1.08e-12!219;UBERON:0000956!2.93e-12!25;UBERON:0000203!2.93e-12!25;UBERON:0000062!3.68e-11!511;UBERON:0000481!2.26e-09!347;UBERON:0000025!8.40e-09!194;UBERON:0002308!1.62e-08!9;UBERON:0000125!1.62e-08!9;UBERON:0000477!2.24e-08!286;UBERON:0000922!2.73e-08!612;UBERON:0002420!2.94e-08!9;UBERON:0007245!2.94e-08!9;UBERON:0010009!2.94e-08!9;UBERON:0010011!2.94e-08!9;UBERON:0000454!2.94e-08!9;UBERON:0004111!3.18e-08!241;UBERON:0000468!1.06e-07!659;UBERON:0000475!1.18e-07!365;UBERON:0003076!1.53e-07!15;UBERON:0003057!1.53e-07!15;UBERON:0002298!5.54e-07!8;UBERON:0002050!8.41e-07!605;UBERON:0005423!8.41e-07!605 | |ontology_enrichment_uberon=UBERON:0007023!3.57e-50!115;UBERON:0001049!3.29e-29!57;UBERON:0005068!3.29e-29!57;UBERON:0006241!3.29e-29!57;UBERON:0007135!3.29e-29!57;UBERON:0001017!1.04e-25!82;UBERON:0005743!3.99e-25!86;UBERON:0003075!9.08e-25!86;UBERON:0007284!9.08e-25!86;UBERON:0000955!1.27e-24!69;UBERON:0006238!1.27e-24!69;UBERON:0002780!1.18e-23!41;UBERON:0001890!1.18e-23!41;UBERON:0006240!1.18e-23!41;UBERON:0002616!2.15e-23!59;UBERON:0002346!6.25e-23!90;UBERON:0003080!7.65e-23!42;UBERON:0000073!1.91e-22!94;UBERON:0001016!1.91e-22!94;UBERON:0002020!6.29e-19!34;UBERON:0003528!6.29e-19!34;UBERON:0001893!6.46e-19!34;UBERON:0002791!5.10e-18!33;UBERON:0000033!8.58e-18!123;UBERON:0001869!3.41e-17!32;UBERON:0000153!5.73e-17!129;UBERON:0007811!5.73e-17!129;UBERON:0003056!8.15e-17!61;UBERON:0004121!1.01e-14!169;UBERON:0002619!1.30e-14!22;UBERON:0000924!5.97e-14!173;UBERON:0006601!5.97e-14!173;UBERON:0001950!5.93e-13!20;UBERON:0000064!1.08e-12!219;UBERON:0000956!2.93e-12!25;UBERON:0000203!2.93e-12!25;UBERON:0000062!3.68e-11!511;UBERON:0000481!2.26e-09!347;UBERON:0000025!8.40e-09!194;UBERON:0002308!1.62e-08!9;UBERON:0000125!1.62e-08!9;UBERON:0000477!2.24e-08!286;UBERON:0000922!2.73e-08!612;UBERON:0002420!2.94e-08!9;UBERON:0007245!2.94e-08!9;UBERON:0010009!2.94e-08!9;UBERON:0010011!2.94e-08!9;UBERON:0000454!2.94e-08!9;UBERON:0004111!3.18e-08!241;UBERON:0000468!1.06e-07!659;UBERON:0000475!1.18e-07!365;UBERON:0003076!1.53e-07!15;UBERON:0003057!1.53e-07!15;UBERON:0002298!5.54e-07!8;UBERON:0002050!8.41e-07!605;UBERON:0005423!8.41e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;9.11e-10;3!UBERON:0000988;2.82e-09;3!UBERON:0007023;9.75e-09;114!UBERON:0000125;3.59e-08;9!UBERON:0002308;3.59e-08;9!UBERON:0000369;1.52e-07;4!UBERON:0002435;1.52e-07;4!UBERON:0000204;1.52e-07;4!UBERON:0002360;2.83e-07;2!UBERON:0000094;2.83e-07;2!UBERON:0010743;2.83e-07;2!UBERON:0002081;3.15e-07;2!UBERON:0001905;9.96e-07;2!UBERON:0002148;9.96e-07;2!UBERON:0005162;9.96e-07;2!UBERON:0000122;9.96e-07;2!UBERON:0002757;9.96e-07;2!UBERON:0010134;9.96e-07;2!UBERON:0006331;9.96e-07;2!UBERON:0009662;9.96e-07;2!UBERON:0005408;9.96e-07;2!UBERON:0001899;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.60e-21,114;UBERON:0001017,1.75e-11,81;UBERON:0001016,5.59e-11,89;UBERON:0000955,2.82e-10,68;UBERON:0006238,2.82e-10,68;UBERON:0004151,6.90e-10,3;UBERON:0011216,1.85e-09,223;UBERON:0001049,3.94e-09,56;UBERON:0005068,3.94e-09,56;UBERON:0006241,3.94e-09,56;UBERON:0007135,3.94e-09,56;UBERON:0000988,5.31e-09,3;UBERON:0000073,1.89e-08,53;UBERON:0002616,1.89e-08,53;UBERON:0000125,5.56e-08,9;UBERON:0002308,5.56e-08,9;UBERON:0003075,5.76e-08,82;UBERON:0007284,5.76e-08,82;UBERON:0000369,1.97e-07,4;UBERON:0002435,1.97e-07,4;UBERON:0000204,1.97e-07,4;UBERON:0010082,1.97e-07,4;UBERON:0002346,2.09e-07,86;UBERON:0002780,2.36e-07,41;UBERON:0001890,2.36e-07,41;UBERON:0003080,2.36e-07,41;UBERON:0006240,2.36e-07,41;UBERON:0002081,2.63e-07,2;UBERON:0010227,2.63e-07,2;UBERON:0002360,3.70e-07,2;UBERON:0000094,3.70e-07,2;UBERON:0010743,3.70e-07,2;UBERON:0005162,5.51e-07,2;UBERON:0000122,5.51e-07,2;UBERON:0010314,9.01e-07,132 | |||
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| ||
|short_description=p3@SPON1 | |short_description=p3@SPON1 | ||
}} | }} |
Latest revision as of 21:14, 16 September 2015
Short description: | p3@SPON1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPON1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533633, NM_006108_5end |
EntrezGene: | SPON1 |
HGNC: | 11252 |
UniProt: | Q9HCB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.60e-21 | 114 |
central nervous system | 1.75e-11 | 81 |
nervous system | 5.59e-11 | 89 |
brain | 2.82e-10 | 68 |
future brain | 2.82e-10 | 68 |
cardiac chamber | 6.90e-10 | 3 |
organ system subdivision | 1.85e-09 | 223 |
neural tube | 3.94e-09 | 56 |
neural rod | 3.94e-09 | 56 |
future spinal cord | 3.94e-09 | 56 |
neural keel | 3.94e-09 | 56 |
pons | 5.31e-09 | 3 |
regional part of nervous system | 1.89e-08 | 53 |
regional part of brain | 1.89e-08 | 53 |
neural nucleus | 5.56e-08 | 9 |
nucleus of brain | 5.56e-08 | 9 |
neural plate | 5.76e-08 | 82 |
presumptive neural plate | 5.76e-08 | 82 |
corpus striatum | 1.97e-07 | 4 |
striatum | 1.97e-07 | 4 |
ventral part of telencephalon | 1.97e-07 | 4 |
future corpus striatum | 1.97e-07 | 4 |
neurectoderm | 2.09e-07 | 86 |
regional part of forebrain | 2.36e-07 | 41 |
forebrain | 2.36e-07 | 41 |
anterior neural tube | 2.36e-07 | 41 |
future forebrain | 2.36e-07 | 41 |
cardiac atrium | 2.63e-07 | 2 |
future cardiac atrium | 2.63e-07 | 2 |
meninx | 3.70e-07 | 2 |
membrane organ | 3.70e-07 | 2 |
meningeal cluster | 3.70e-07 | 2 |
multi cell component structure | 5.51e-07 | 2 |
neuron projection bundle | 5.51e-07 | 2 |
structure with developmental contribution from neural crest | 9.01e-07 | 132 |