FFCP PHASE1:Hg19::chr11:1463619..1463622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9024 | |EntrezGene=9024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11405 | |HGNC=11405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000531078_5end | |association_with_transcript=-52bp_to_ENST00000531078_5end | ||
|cluster_id=chr11:1463619..1463622,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_23_at_BRSK2_5end | |description=CAGE_peak_23_at_BRSK2_5end | ||
|id=chr11:1463619..1463622,+ | |id=chr11:1463619..1463622,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease=DOID:0050619!3.40e-10!1;DOID:1357!3.40e-10!1 | |ontology_enrichment_disease=DOID:0050619!3.40e-10!1;DOID:1357!3.40e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.52e-19!57;UBERON:0005068!1.52e-19!57;UBERON:0006241!1.52e-19!57;UBERON:0007135!1.52e-19!57;UBERON:0003075!4.16e-17!86;UBERON:0007284!4.16e-17!86;UBERON:0005743!5.82e-17!86;UBERON:0002346!2.99e-16!90;UBERON:0002616!1.07e-15!59;UBERON:0000955!1.24e-15!69;UBERON:0006238!1.24e-15!69;UBERON:0001017!2.61e-15!82;UBERON:0000073!3.63e-15!94;UBERON:0001016!3.63e-15!94;UBERON:0003076!1.30e-14!15;UBERON:0003057!1.30e-14!15;UBERON:0000033!4.76e-13!123;UBERON:0007023!2.03e-12!115;UBERON:0000153!2.48e-12!129;UBERON:0007811!2.48e-12!129;UBERON:0001869!4.81e-12!32;UBERON:0004733!5.47e-12!12;UBERON:0002028!5.47e-12!12;UBERON:0007277!5.47e-12!12;UBERON:0002791!1.14e-11!33;UBERON:0002020!2.58e-11!34;UBERON:0003528!2.58e-11!34;UBERON:0001893!2.58e-11!34;UBERON:0004732!4.43e-11!13;UBERON:0001874!3.10e-10!1;UBERON:0001764!3.40e-10!1;UBERON:0001825!3.40e-10!1;UBERON:0002902!3.71e-10!1;UBERON:0009899!3.71e-10!1;UBERON:0003056!6.19e-10!61;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0000369!1.46e-09!4;UBERON:0002435!1.46e-09!4;UBERON:0000204!1.46e-09!4;UBERON:0010082!1.46e-09!4;UBERON:0002680!1.82e-09!9;UBERON:0001895!1.82e-09!9;UBERON:0010092!1.82e-09!9;UBERON:0002780!2.63e-09!41;UBERON:0001890!2.63e-09!41;UBERON:0006240!2.63e-09!41;UBERON:0002619!3.04e-09!22;UBERON:0003080!4.51e-09!42;UBERON:0004121!8.85e-09!169;UBERON:0000924!1.61e-08!173;UBERON:0006601!1.61e-08!173;UBERON:0000956!3.70e-08!25;UBERON:0000203!3.70e-08!25;UBERON:0000349!8.91e-08!5;UBERON:0002037!5.42e-07!6;UBERON:0006215!5.42e-07!6;UBERON:0001950!9.83e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.42e-07;53!UBERON:0002616;3.42e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p23@BRSK2 | |short_description=p23@BRSK2 | ||
}} | }} |
Latest revision as of 21:45, 16 September 2015
Short description: | p23@BRSK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_BRSK2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -52bp_to_ENST00000531078_5end |
EntrezGene: | BRSK2 |
HGNC: | 11405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |