FFCP PHASE1:Hg19::chr16:29283104..29283109,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29283104..29283109,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr16:29283104..29283109,- | |description=CAGE_peak_at_chr16:29283104..29283109,- | ||
|id=chr16:29283104..29283109,- | |id=chr16:29283104..29283109,- | ||
|ontology_enrichment_celltype=CL:0002057!6.51e-36!42;CL:0000860!5.84e-33!45;CL:0002194!9.47e-21!63;CL:0000576!9.47e-21!63;CL:0000040!9.47e-21!63;CL:0000559!9.47e-21!63;CL:0002009!7.01e-20!65;CL:0000839!6.31e-18!70;CL:0000557!1.44e-17!71;CL:0000766!2.74e-17!76;CL:0000134!6.02e-12!358;CL:0002320!2.06e-11!365;CL:0000569!7.23e-11!4;CL:0000011!7.23e-11!4;CL:0000048!1.24e-10!430;CL:0000723!2.98e-10!436;CL:0000219!4.30e-10!390;CL:0000034!9.23e-10!444;CL:0000763!2.33e-09!112;CL:0000049!2.33e-09!112;CL:0002087!1.99e-08!119;CL:0002031!4.30e-07!124;CL:0000738!8.66e-07!140 | |ontology_enrichment_celltype=CL:0002057!6.51e-36!42;CL:0000860!5.84e-33!45;CL:0002194!9.47e-21!63;CL:0000576!9.47e-21!63;CL:0000040!9.47e-21!63;CL:0000559!9.47e-21!63;CL:0002009!7.01e-20!65;CL:0000839!6.31e-18!70;CL:0000557!1.44e-17!71;CL:0000766!2.74e-17!76;CL:0000134!6.02e-12!358;CL:0002320!2.06e-11!365;CL:0000569!7.23e-11!4;CL:0000011!7.23e-11!4;CL:0000048!1.24e-10!430;CL:0000723!2.98e-10!436;CL:0000219!4.30e-10!390;CL:0000034!9.23e-10!444;CL:0000763!2.33e-09!112;CL:0000049!2.33e-09!112;CL:0002087!1.99e-08!119;CL:0002031!4.30e-07!124;CL:0000738!8.66e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-54;33!CL:0002057;3.42e-54;33!CL:0000473;2.99e-36;39!CL:0000234;2.99e-36;39!CL:0000576;6.23e-25;48!CL:0000569;9.84e-22;4!CL:0000766;5.66e-15;69!CL:0000134;1.48e-09;55!CL:0000048;4.41e-09;58!CL:0000723;1.08e-08;61!CL:0002494;4.69e-08;16!CL:0000219;1.41e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-45,42;CL:0002057,3.00e-45,42;CL:0000473,5.00e-39,48;CL:0000234,5.00e-39,48;CL:0002194,2.57e-30,59;CL:0000576,2.57e-30,59;CL:0000040,2.57e-30,59;CL:0000559,2.57e-30,59;CL:0002009,3.42e-29,61;CL:0000839,1.12e-26,66;CL:0000557,3.23e-26,67;CL:0000766,4.11e-24,72;CL:0000569,1.59e-21,4;CL:0000011,1.59e-21,4;CL:0000763,1.14e-14,108;CL:0000049,1.14e-14,108;CL:0000134,3.33e-14,354;CL:0002320,8.62e-14,361;CL:0002087,1.62e-13,115;CL:0002031,8.93e-13,120;CL:0000219,2.47e-12,386;CL:0000048,1.77e-11,427;CL:0000723,3.22e-11,433;CL:0000034,6.97e-11,441;CL:0000738,8.98e-11,136;CL:0002032,1.90e-08,161;CL:0000837,1.90e-08,161;CL:0002494,5.72e-08,16;CL:0000037,6.35e-08,168;CL:0000988,2.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.20e-34;42!CL:0000011;9.84e-22;4 | |||
|ontology_enrichment_disease=DOID:2394!4.91e-23!14;DOID:120!3.15e-12!27;DOID:193!3.69e-11!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.35e-22;14!DOID:120;3.98e-11;27!DOID:193;2.83e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.62e-22,14;DOID:120,4.34e-11,27;DOID:193,3.06e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.70e-19!80;UBERON:0001474!2.33e-18!86;UBERON:0004765!1.31e-15!101;UBERON:0001434!1.31e-15!101;UBERON:0002390!3.56e-14!102;UBERON:0003061!3.56e-14!102;UBERON:0002118!1.09e-12!5;UBERON:0004532!1.09e-12!5;UBERON:0002405!1.60e-12!115;UBERON:0002193!3.55e-12!112;UBERON:0003081!4.02e-11!216;UBERON:0000992!5.86e-11!13;UBERON:0002384!1.10e-10!375;UBERON:0002204!1.73e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;5.37e-17;5!UBERON:0000992;6.77e-10;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-22,76;UBERON:0001474,1.15e-20,82;UBERON:0004765,1.88e-18,90;UBERON:0001434,4.92e-18,100;UBERON:0002405,1.01e-17,93;UBERON:0002118,6.22e-17,5;UBERON:0002390,1.34e-16,98;UBERON:0003061,1.34e-16,98;UBERON:0002193,1.14e-14,108;UBERON:0003081,5.10e-14,203;UBERON:0002384,3.16e-13,371;UBERON:0000926,2.57e-12,315;UBERON:0004120,2.57e-12,315;UBERON:0006603,2.57e-12,315;UBERON:0002204,4.20e-10,167;UBERON:0000992,7.45e-10,13 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0,1.62700325833979,2.05583944010913,4.02618282163635,2.3015391385772,2.30544635876191,2.60130452877444,6.20542225325913,6.45484683583826,5.41705946377367,1.12945403725563,1.09162460023138,0.674170453335254,7.95818120164347,3.85114832491312,12.1474053901818,0.329851300186716,0.199463657621632,0,0.870627715885752,2.26954089876456,0,1.25624332628372,1.0429658368404,1.95469960234605,0.605399502633369,1.10483290796269,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57504788195691,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,1.71749864090389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,1.47775344708365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,0.233713309847224,1.10961172300523,0.947015026375446,0.251567901752575,0.889811221596536,5.49216164152617,7.25908434063547,3.41961841282117,1.03498604992744,2.23015474029183,0,0.931577741257556,0.414706207840855,1.06336685823198,0.521745061811734,2.55437935295271,2.28483127301277,2.03435366602331,4.54621648006399,2.04080058380728,0.928067519756987,1.59238355479446,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:29283104..29283109,- | |short_description=p@chr16:29283104..29283109,- | ||
}} | }} |
Latest revision as of 07:49, 25 July 2015
Short description: | p@chr16:29283104..29283109, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29283104..29283109, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-22 | 76 |
bone element | 1.15e-20 | 82 |
skeletal element | 1.88e-18 | 90 |
skeletal system | 4.92e-18 | 100 |
immune system | 1.01e-17 | 93 |
right ovary | 6.22e-17 | 5 |
hematopoietic system | 1.34e-16 | 98 |
blood island | 1.34e-16 | 98 |
hemolymphoid system | 1.14e-14 | 108 |
lateral plate mesoderm | 5.10e-14 | 203 |
connective tissue | 3.16e-13 | 371 |
mesoderm | 2.57e-12 | 315 |
mesoderm-derived structure | 2.57e-12 | 315 |
presumptive mesoderm | 2.57e-12 | 315 |
musculoskeletal system | 4.20e-10 | 167 |
female gonad | 7.45e-10 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.62e-22 | 14 |
female reproductive organ cancer | 4.34e-11 | 27 |
reproductive organ cancer | 3.06e-10 | 29 |