FFCP PHASE1:Hg19::chr11:66082890..66082979,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66082890..66082979,+ | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_at_chr11:66082890..66082979,+ | |description=CAGE_peak_at_chr11:66082890..66082979,+ | ||
|id=chr11:66082890..66082979,+ | |id=chr11:66082890..66082979,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.62e-30!180;CL:0000057!7.01e-29!75;CL:0000183!4.12e-11!59;CL:0002620!4.78e-11!23;CL:0000680!8.83e-11!57;CL:0000056!8.83e-11!57;CL:0000355!8.83e-11!57;CL:0000187!2.69e-10!54;CL:0002334!5.56e-09!12;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000048!3.88e-08!430;CL:0000723!8.79e-08!436;CL:0000034!1.46e-07!444;CL:0000192!1.91e-07!42;CL:0000514!1.91e-07!42;CL:0002570!6.69e-07!8 | |ontology_enrichment_celltype=CL:0000055!1.62e-30!180;CL:0000057!7.01e-29!75;CL:0000183!4.12e-11!59;CL:0002620!4.78e-11!23;CL:0000680!8.83e-11!57;CL:0000056!8.83e-11!57;CL:0000355!8.83e-11!57;CL:0000187!2.69e-10!54;CL:0002334!5.56e-09!12;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000048!3.88e-08!430;CL:0000723!8.79e-08!436;CL:0000034!1.46e-07!444;CL:0000192!1.91e-07!42;CL:0000514!1.91e-07!42;CL:0002570!6.69e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000057;2.77e-12;73!CL:0002334;4.26e-11;12!CL:0002620;1.52e-10;23!CL:0000134;7.68e-09;55!CL:0000723;7.88e-09;61!CL:0002570;1.81e-08;8!CL:0002320;1.86e-08;188!CL:0000048;3.26e-07;58!CL:0000187;4.04e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.82e-34,76;CL:0000048,1.02e-16,427;CL:0000723,7.88e-16,433;CL:0000034,1.07e-14,441;CL:0000187,3.63e-12,55;CL:0000680,9.28e-12,58;CL:0000056,9.28e-12,58;CL:0000355,9.28e-12,58;CL:0002334,3.81e-11,12;CL:0002320,4.78e-11,361;CL:0002620,1.73e-10,23;CL:0000393,7.46e-10,61;CL:0000211,7.46e-10,61;CL:0000192,6.43e-09,43;CL:0000514,6.43e-09,43;CL:0000134,9.32e-09,354;CL:0002570,1.83e-08,8;CL:0000136,1.53e-07,15;CL:0000499,8.76e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;8.43e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.88e-17!83;UBERON:0002329!6.88e-17!83;UBERON:0003077!6.88e-17!83;UBERON:0003059!6.88e-17!83;UBERON:0007282!6.88e-17!83;UBERON:0009618!6.88e-17!83;UBERON:0007285!6.88e-17!83;UBERON:0004290!7.19e-14!70;UBERON:0002385!1.34e-11!63;UBERON:0001015!1.34e-11!63;UBERON:0000383!1.34e-11!63;UBERON:0000486!2.23e-11!82;UBERON:0001134!3.03e-11!61;UBERON:0002036!3.03e-11!61;UBERON:0003082!3.03e-11!61;UBERON:0003102!1.56e-10!95;UBERON:0001013!3.62e-10!14;UBERON:0002199!5.05e-10!45;UBERON:0002416!5.05e-10!45;UBERON:0005256!1.20e-09!143;UBERON:0000475!3.37e-09!365;UBERON:0004923!2.02e-08!57;UBERON:0002097!2.94e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!6.88e-17!83;UBERON:0002329!6.88e-17!83;UBERON:0003077!6.88e-17!83;UBERON:0003059!6.88e-17!83;UBERON:0007282!6.88e-17!83;UBERON:0009618!6.88e-17!83;UBERON:0007285!6.88e-17!83;UBERON:0004290!7.19e-14!70;UBERON:0002385!1.34e-11!63;UBERON:0001015!1.34e-11!63;UBERON:0000383!1.34e-11!63;UBERON:0000486!2.23e-11!82;UBERON:0001134!3.03e-11!61;UBERON:0002036!3.03e-11!61;UBERON:0003082!3.03e-11!61;UBERON:0003102!1.56e-10!95;UBERON:0001013!3.62e-10!14;UBERON:0002199!5.05e-10!45;UBERON:0002416!5.05e-10!45;UBERON:0005256!1.20e-09!143;UBERON:0000475!3.37e-09!365;UBERON:0004923!2.02e-08!57;UBERON:0002097!2.94e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.23e-12;14!UBERON:0002384;4.13e-10;198!UBERON:0004457;4.94e-08;9!UBERON:0000042;4.94e-08;9!UBERON:0002199;7.64e-08;46!UBERON:0002416;7.64e-08;46!UBERON:0004905;1.76e-07;8!UBERON:0000982;1.76e-07;8!UBERON:0004770;1.76e-07;8!UBERON:0003102;8.14e-07;50!UBERON:0002385;9.23e-07;31!UBERON:0001015;9.23e-07;31!UBERON:0000383;9.23e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.77e-13,73;UBERON:0002329,6.45e-13,71;UBERON:0003059,6.45e-13,71;UBERON:0007282,6.45e-13,71;UBERON:0004290,6.45e-13,71;UBERON:0009618,6.45e-13,71;UBERON:0001013,1.13e-12,14;UBERON:0003077,1.52e-12,72;UBERON:0007285,1.52e-12,72;UBERON:0001134,6.43e-12,62;UBERON:0002036,6.43e-12,62;UBERON:0003082,6.43e-12,62;UBERON:0002199,7.34e-12,46;UBERON:0002416,7.34e-12,46;UBERON:0002385,8.62e-12,64;UBERON:0001015,8.62e-12,64;UBERON:0000383,8.62e-12,64;UBERON:0007503,1.18e-11,78;UBERON:0000486,1.90e-11,83;UBERON:0002384,4.10e-11,371;UBERON:0003102,7.85e-11,99;UBERON:0004923,9.50e-09,66;UBERON:0002097,2.11e-08,41;UBERON:0005256,3.15e-08,122;UBERON:0004905,1.46e-07,8;UBERON:0000982,1.46e-07,8;UBERON:0004770,1.46e-07,8;UBERON:0003104,2.71e-07,160;UBERON:0009142,2.71e-07,160;UBERON:0005631,9.44e-07,14;UBERON:0000158,9.44e-07,14 | |||
|phase1_expression=9.08391896352783,14.7729361484778,10.2896714990059,5.00366491765652,4.91657203870017,3.48935409640147,15.1979926900986,13.8978372153903,44.4015567939725,0,1.39560233594486,7.64544802455603,6.85794143393979,12.7479343548848,4.30816588446291,3.36162573225888,3.61616716814386,7.30310090387373,6.8310591830671,0.246242116153576,0.612002073732759,0.940364164434263,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0,0,0.289648807765598,0,3.35350429851818,6.13740296848946,15.1804444001518,2.00535164254356,4.63508860674636,0,0,0.189069634328136,0.221729397462564,0.702678285545008,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8728219712034,2.65924074495618,7.41491412554025,21.7995831769098,8.15737279056221,6.72813120170769,0,2.22000793575444,3.42332138939743,1.21239604862719,1.79808093424805,3.48122083583342,8.06646294271999,2.81185718200556,15.9201639183463,0.570471821544449,13.3009325691103,0.822041490506354,0.485618833104395,0.421352420106746,4.89970011011744,5.03620700978249,12.8123968657949,8.31602000097437,10.8797448882565,3.64064544775211,2.87447256726495,1.5150250255866,2.12701483782339,3.04770527032601,6.58466431321257,10.7270728529657,6.30999847407706,2.1552114800404,16.1450672119976,8.11518077510556,5.93409323246773,17.7053746689797,6.18315175430633,9.53269998168828,10.2364270982374,23.7974628460185,5.16416127354353,11.6119536152293,5.79914361446486,10.0220555227663,22.7206139210633,6.14587799188606,9.49539316938731,0,0,0,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0,1.56449532329816,48.2430703644664,1.38134921352481,22.754028473567,35.3720946018097,0,0,0,0,0,0,0,0,0,0,1.40241773803446,6.5851841813024,5.88034845542168,0,0,0,0,0,4.80389868835872,0,0,0,0.555530670951178,1.62904152655162,4.15973914111831,0,0.927443239800615,3.17003474436719,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,5.13217338068116,1.43958489784653,0.300343057843917,0,1.79409734952577,1.74384027533312,7.99387315448355,0.775630294546667,82.260982545933,7.607724773004,9.30783408047047,14.5610411675913,7.45901385360212,0,2.93064396917709,18.444161181901,32.0146747180951,4.93944202068461,5.21177894869976,16.3480296421571,4.75171123760058,0.301439377059586,0.871533458600294,2.0994328148232,0,0,0,0.479249710983165,0,0,3.76431397335706,0.61642896765115,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,8.58840442033979,18.0061387581484,5.96783052139418,10.814484799602,30.5113570843147,22.0783381047509,7.73133338951907,0.300946099727719,4.5481500811197,7.24311499047534,13.2845119707087,0.921845842708516,14.2489127727656,14.2934844947801,7.89229874764969,0,0,0.106727557803444,23.6439505728082,24.9653159265746,36.2868351995616,9.6762045049323,7.82656063769118,12.0683840606222,12.0450800300359,5.11707249066703,12.8683136914886,2.96836132889982,14.9583402988576,25.7464501704034,17.657338542969,9.34657972530518,17.5477671474538,0,0,0,0.918515585316854,5.28064387219479,5.24497659837697,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0,0.824328093181778,0,0,1.14853107599234,0,8.03419649220798,11.2138033218861,3.38906957652218,3.68408819342711,0.964856007391714,6.87489567156951,6.67076792005451,4.94314439013385,12.1083568479563,0,0,0,0,1.39453664789186,22.9813013186367,1.3940745403212,0.308033580176089,0,0,0.9266210955196,0,3.72158369359667,2.84741482246853,4.76575484809562,10.2359116524534,11.1264136888819,5.72765846266686,0,3.77732160924961,4.66712950551293,3.29874726567922,0,0,0,2.92580243453754,2.19342140668156,0,9.554993798559,8.9085422130839,4.52032466480971,2.75682671773062,0.66343897524122,0,7.52408194546694,16.3973688011658,0.202910376962704,1.8589409885985,1.12678241012897,4.30234056612155,11.9863830036008,0,12.0618761784003,31.455037659352,38.8567973692684,3.79473173765715,3.84928192269481,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,1.43246690842614,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,5.28767299025073,0,0,0,2.46608514092334,0,0,0,0.463840490809256,1.99613798001194,0,0,4.34999745260876,0,0,0,0.689486746482929,0.291604613383254,0,0.885741385813839,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0.219385397153973,0,0,2.38545801361771,0,0,0,0,3.82801391678303,3.93869651628008,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0.067401132980677,4.81546588379273,0.234264445725339,0,0,0,0,0,0,2.71702292402498,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.678923115418936,0,2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| ||
|short_description=p@chr11:66082890..66082979,+ | |short_description=p@chr11:66082890..66082979,+ | ||
}} | }} |
Latest revision as of 01:01, 24 July 2015
Short description: | p@chr11:66082890..66082979, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66082890..66082979, + |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.82e-34 | 76 |
multi fate stem cell | 1.02e-16 | 427 |
somatic stem cell | 7.88e-16 | 433 |
stem cell | 1.07e-14 | 441 |
muscle cell | 3.63e-12 | 55 |
muscle precursor cell | 9.28e-12 | 58 |
myoblast | 9.28e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.28e-12 | 58 |
preadipocyte | 3.81e-11 | 12 |
connective tissue cell | 4.78e-11 | 361 |
skin fibroblast | 1.73e-10 | 23 |
electrically responsive cell | 7.46e-10 | 61 |
electrically active cell | 7.46e-10 | 61 |
smooth muscle cell | 6.43e-09 | 43 |
smooth muscle myoblast | 6.43e-09 | 43 |
mesenchymal cell | 9.32e-09 | 354 |
mesenchymal stem cell of adipose | 1.83e-08 | 8 |
fat cell | 1.53e-07 | 15 |
stromal cell | 8.76e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.77e-13 | 73 |
somite | 6.45e-13 | 71 |
presomitic mesoderm | 6.45e-13 | 71 |
presumptive segmental plate | 6.45e-13 | 71 |
dermomyotome | 6.45e-13 | 71 |
trunk paraxial mesoderm | 6.45e-13 | 71 |
adipose tissue | 1.13e-12 | 14 |
paraxial mesoderm | 1.52e-12 | 72 |
presumptive paraxial mesoderm | 1.52e-12 | 72 |
skeletal muscle tissue | 6.43e-12 | 62 |
striated muscle tissue | 6.43e-12 | 62 |
myotome | 6.43e-12 | 62 |
integument | 7.34e-12 | 46 |
integumental system | 7.34e-12 | 46 |
muscle tissue | 8.62e-12 | 64 |
musculature | 8.62e-12 | 64 |
musculature of body | 8.62e-12 | 64 |
epithelial vesicle | 1.18e-11 | 78 |
multilaminar epithelium | 1.90e-11 | 83 |
connective tissue | 4.10e-11 | 371 |
surface structure | 7.85e-11 | 99 |
organ component layer | 9.50e-09 | 66 |
skin of body | 2.11e-08 | 41 |
trunk mesenchyme | 3.15e-08 | 122 |
articulation | 1.46e-07 | 8 |
skeletal joint | 1.46e-07 | 8 |
articular system | 1.46e-07 | 8 |
mesenchyme | 2.71e-07 | 160 |
entire embryonic mesenchyme | 2.71e-07 | 160 |
extraembryonic membrane | 9.44e-07 | 14 |
membranous layer | 9.44e-07 | 14 |