FFCP PHASE1:Mm9::chr9:107493277..107493307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:107493277..107493307,+ | |||
|description=CAGE_peak_at_chr9:107493277..107493307,+ | |description=CAGE_peak_at_chr9:107493277..107493307,+ | ||
|id=chr9:107493277..107493307,+ | |id=chr9:107493277..107493307,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.01e-07!6;CL:0000677!3.01e-07!6;CL:0000212!3.01e-07!6;CL:0000584!3.01e-07!6;CL:0002563!7.05e-07!9;CL:0002251!7.05e-07!9 | |ontology_enrichment_celltype=CL:0000239!3.01e-07!6;CL:0000677!3.01e-07!6;CL:0000212!3.01e-07!6;CL:0000584!3.01e-07!6;CL:0002563!7.05e-07!9;CL:0002251!7.05e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.37e-15,6;CL:0000677,3.37e-15,6;CL:0000584,3.37e-15,6;CL:0000075,6.34e-13,7;CL:0002563,6.89e-10,9;CL:0002251,6.89e-10,9;CL:0000682,4.02e-09,3;CL:0000066,4.69e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.54e-13!59;UBERON:0001007!1.73e-12!128;UBERON:0001555!1.73e-12!128;UBERON:0007026!1.73e-12!128;UBERON:0000344!1.98e-12!15;UBERON:0004119!5.29e-12!130;UBERON:0000925!5.29e-12!130;UBERON:0006595!5.29e-12!130;UBERON:0000160!7.13e-12!43;UBERON:0004921!3.48e-11!126;UBERON:0004185!3.48e-11!126;UBERON:0001242!2.43e-10!13;UBERON:0000060!2.43e-10!13;UBERON:0001262!2.43e-10!13;UBERON:0004786!2.43e-10!13;UBERON:0004923!1.20e-08!24;UBERON:0003350!7.05e-07!9;UBERON:0004808!7.05e-07!9;UBERON:0001277!7.05e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!6.54e-13!59;UBERON:0001007!1.73e-12!128;UBERON:0001555!1.73e-12!128;UBERON:0007026!1.73e-12!128;UBERON:0000344!1.98e-12!15;UBERON:0004119!5.29e-12!130;UBERON:0000925!5.29e-12!130;UBERON:0006595!5.29e-12!130;UBERON:0000160!7.13e-12!43;UBERON:0004921!3.48e-11!126;UBERON:0004185!3.48e-11!126;UBERON:0001242!2.43e-10!13;UBERON:0000060!2.43e-10!13;UBERON:0001262!2.43e-10!13;UBERON:0004786!2.43e-10!13;UBERON:0004923!1.20e-08!24;UBERON:0003350!7.05e-07!9;UBERON:0004808!7.05e-07!9;UBERON:0001277!7.05e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.61e-38,31;UBERON:0005409,2.83e-25,47;UBERON:0000344,1.82e-22,15;UBERON:0001242,1.09e-17,13;UBERON:0001262,1.09e-17,13;UBERON:0004786,1.09e-17,13;UBERON:0004923,4.87e-13,24;UBERON:0003350,6.89e-10,9;UBERON:0004808,6.89e-10,9;UBERON:0001277,6.89e-10,9;UBERON:0001007,7.24e-10,116;UBERON:0001555,7.24e-10,116;UBERON:0007026,7.24e-10,116;UBERON:0002108,7.82e-10,4;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0004921,4.77e-08,114;UBERON:0000485,5.90e-08,11;UBERON:0000331,1.45e-07,3;UBERON:0002116,1.45e-07,3;UBERON:0001204,1.45e-07,3;UBERON:0001168,1.45e-07,3 | |||
|phase1_expression=0,29.3139342417063,37.7649368693315,1.81478526784098,5.50985302940982,4.53274034162102,8.64366770203445,0,0.422366166455,0,0.171217968225505,0,0,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0,0,2.04103896362567,0.0992909512008853,0,29.7585906395736,32.346708630471,36.1766137392463,24.1226717849082,20.6852383378453,3.6104449696711,2.52030129759931,3.99114919179548,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,6.8510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,1.0108910337347,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,10.5734010554815,17.4537373997939,0,0,0,0,1.55664630691409,1.14135375667535,5.69434873853414,6.75265714368445,4.02136334080431,5.17286827306992,5.06906626509712,4.49409704327111,6.48414149624083,4.77939055810481,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.941992367048249,3.20832626196681,2.07516838961004,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0,0,0.505157755894224,0.358794827043824,0.964887042726734,0.184753190166605,0,0,0,0,0.502518772325447,0.952174563544055,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84271122485043,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,6.41257840585672,0,0,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0.539457385539283,0.165306911450672,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,29.3139342417063,37.7649368693315,1.81478526784098,5.50985302940982,4.53274034162102,8.64366770203445,0,0.422366166455,0,0.171217968225505,0,0,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0,0,2.04103896362567,0.0992909512008853,0,29.7585906395736,32.346708630471,36.1766137392463,24.1226717849082,20.6852383378453,3.6104449696711,2.52030129759931,3.99114919179548,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,6.8510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,1.0108910337347,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,10.5734010554815,17.4537373997939,0,0,0,0,1.55664630691409,1.14135375667535,5.69434873853414,6.75265714368445,4.02136334080431,5.17286827306992,5.06906626509712,4.49409704327111,6.48414149624083,4.77939055810481,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.941992367048249,3.20832626196681,2.07516838961004,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0,0,0.505157755894224,0.358794827043824,0.964887042726734,0.184753190166605,0,0,0,0,0.502518772325447,0.952174563544055,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84271122485043,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,6.41257840585672,0,0,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0.539457385539283,0.165306911450672,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr9:107493277..107493307,+ | |short_description=p@chr9:107493277..107493307,+ | ||
}} | }} |
Latest revision as of 12:50, 4 August 2015
Short description: | p@chr9:107493277..107493307, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:107493277..107493307, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.37e-15 | 6 |
gut absorptive cell | 3.37e-15 | 6 |
enterocyte | 3.37e-15 | 6 |
columnar/cuboidal epithelial cell | 6.34e-13 | 7 |
intestinal epithelial cell | 6.89e-10 | 9 |
epithelial cell of alimentary canal | 6.89e-10 | 9 |
M cell of gut | 4.02e-09 | 3 |
epithelial cell | 4.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.61e-38 | 31 |
gastrointestinal system | 2.83e-25 | 47 |
mucosa | 1.82e-22 | 15 |
intestinal mucosa | 1.09e-17 | 13 |
wall of intestine | 1.09e-17 | 13 |
gastrointestinal system mucosa | 1.09e-17 | 13 |
organ component layer | 4.87e-13 | 24 |
epithelium of mucosa | 6.89e-10 | 9 |
gastrointestinal system epithelium | 6.89e-10 | 9 |
intestinal epithelium | 6.89e-10 | 9 |
digestive system | 7.24e-10 | 116 |
digestive tract | 7.24e-10 | 116 |
primitive gut | 7.24e-10 | 116 |
small intestine | 7.82e-10 | 4 |
endoderm-derived structure | 1.35e-09 | 118 |
endoderm | 1.35e-09 | 118 |
presumptive endoderm | 1.35e-09 | 118 |
subdivision of digestive tract | 4.77e-08 | 114 |
simple columnar epithelium | 5.90e-08 | 11 |
ileal mucosa | 1.45e-07 | 3 |
ileum | 1.45e-07 | 3 |
mucosa of small intestine | 1.45e-07 | 3 |
wall of small intestine | 1.45e-07 | 3 |