FFCP PHASE1:Hg19::chr11:73357603..73357612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58473 | |EntrezGene=58473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19079 | |HGNC=19079 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY96 | |UniProt=F5GY96 | ||
|association_with_transcript=-11bp_to_ENST00000536527_5end | |association_with_transcript=-11bp_to_ENST00000536527_5end | ||
|cluster_id=chr11:73357603..73357612,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_12_at_PLEKHB1_5end | |description=CAGE_peak_12_at_PLEKHB1_5end | ||
|id=chr11:73357603..73357612,+ | |id=chr11:73357603..73357612,+ | ||
|ontology_enrichment_celltype=CL:0002586!3.19e-12!3;CL:0002178!1.02e-11!3;CL:0000149!2.17e-09!4;CL:0000077!3.98e-07!19 | |ontology_enrichment_celltype=CL:0002586!3.19e-12!3;CL:0002178!1.02e-11!3;CL:0000149!2.17e-09!4;CL:0000077!3.98e-07!19 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.39e-53;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.56e-27!5;UBERON:0005388!1.56e-27!5;UBERON:0001802!1.56e-27!5;UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0001781!3.19e-12!3;UBERON:0001782!3.19e-12!3;UBERON:0005424!3.19e-12!3;UBERON:0000970!1.39e-10!20;UBERON:0002104!4.53e-10!21;UBERON:0000991!9.35e-10!21;UBERON:0009196!9.35e-10!21;UBERON:0009117!9.35e-10!21;UBERON:0005564!9.35e-10!21;UBERON:0003296!1.01e-09!4;UBERON:0010133!1.01e-09!4;UBERON:0004176!2.64e-09!22;UBERON:0000020!3.53e-09!23;UBERON:0001032!8.69e-09!24;UBERON:0004456!8.69e-09!24;UBERON:0000019!2.22e-07!19;UBERON:0000047!2.22e-07!19;UBERON:0004088!2.22e-07!19;UBERON:0003072!2.22e-07!19;UBERON:0003071!2.22e-07!19;UBERON:0004128!2.22e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0000966;2.74e-32;5!UBERON:0005388;2.74e-32;5!UBERON:0001802;2.74e-32;5!UBERON:0001894;1.02e-23;7!UBERON:0000970;1.60e-18;20!UBERON:0002104;1.10e-17;21!UBERON:0000020;3.17e-16;23!UBERON:0001032;1.38e-15;24!UBERON:0004456;1.38e-15;24!UBERON:0000019;2.56e-09;19!UBERON:0000047;2.56e-09;19!UBERON:0004088;2.56e-09;19!UBERON:0010230;2.56e-09;19!UBERON:0001456;1.59e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0000966,4.06e-27,6;UBERON:0005388,4.06e-27,6;UBERON:0001802,4.06e-27,6;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.10e-17,21;UBERON:0002104,1.10e-17,21;UBERON:0000020,1.38e-15,24;UBERON:0001032,1.38e-15,24;UBERON:0004456,1.38e-15,24;UBERON:0003056,6.67e-11,61;UBERON:0000019,6.69e-09,20;UBERON:0000047,6.69e-09,20;UBERON:0010312,6.69e-09,20;UBERON:0004088,6.69e-09,20;UBERON:0010230,6.69e-09,20;UBERON:0003072,6.69e-09,20;UBERON:0004128,6.69e-09,20;UBERON:0003071,6.69e-09,20;UBERON:0003075,2.64e-08,82;UBERON:0007284,2.64e-08,82;UBERON:0001456,3.51e-08,22;UBERON:0002346,5.98e-08,86 | |||
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|short_description=p12@PLEKHB1 | |short_description=p12@PLEKHB1 | ||
}} | }} |
Latest revision as of 03:17, 20 September 2015
Short description: | p12@PLEKHB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PLEKHB1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -11bp_to_ENST00000536527_5end |
EntrezGene: | PLEKHB1 |
HGNC: | 19079 |
UniProt: | F5GY96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
retina | 4.06e-27 | 6 |
photoreceptor array | 4.06e-27 | 6 |
posterior segment of eyeball | 4.06e-27 | 6 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
eye | 1.10e-17 | 21 |
visual system | 1.10e-17 | 21 |
sense organ | 1.38e-15 | 24 |
sensory system | 1.38e-15 | 24 |
entire sense organ system | 1.38e-15 | 24 |
pre-chordal neural plate | 6.67e-11 | 61 |
camera-type eye | 6.69e-09 | 20 |
simple eye | 6.69e-09 | 20 |
immature eye | 6.69e-09 | 20 |
ocular region | 6.69e-09 | 20 |
eyeball of camera-type eye | 6.69e-09 | 20 |
optic cup | 6.69e-09 | 20 |
optic vesicle | 6.69e-09 | 20 |
eye primordium | 6.69e-09 | 20 |
neural plate | 2.64e-08 | 82 |
presumptive neural plate | 2.64e-08 | 82 |
face | 3.51e-08 | 22 |
neurectoderm | 5.98e-08 | 86 |