FFCP PHASE1:Hg19::chr16:87812762..87812782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87812762..87812782,- | |||
|description=CAGE_peak_at_chr16:87812762..87812782,- | |description=CAGE_peak_at_chr16:87812762..87812782,- | ||
|id=chr16:87812762..87812782,- | |id=chr16:87812762..87812782,- | ||
|ontology_enrichment_celltype=CL:0000988!8.12e-08!182;CL:0000037!3.08e-07!172;CL:0000566!3.08e-07!172;CL:0002032!6.18e-07!165;CL:0000837!6.18e-07!165 | |ontology_enrichment_celltype=CL:0000988!8.12e-08!182;CL:0000037!3.08e-07!172;CL:0000566!3.08e-07!172;CL:0002032!6.18e-07!165;CL:0000837!6.18e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.30e-09;1!CL:0002625;1.30e-09;1!CL:0002127;1.30e-09;1!CL:0000785;1.30e-09;1!CL:0000911;1.30e-09;1!CL:0000216;1.30e-09;1!CL:0000819;1.30e-09;1!CL:0000814;1.30e-09;1!CL:0000182;8.10e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.31e-10,1;CL:0002625,6.31e-10,1;CL:0000216,6.31e-10,1;CL:0002127,1.06e-09,1;CL:0000914,1.06e-09,1;CL:0000911,1.06e-09,1;CL:0000814,1.06e-09,1;CL:0002042,1.06e-09,1;CL:0002039,1.06e-09,1;CL:0002040,1.06e-09,1;CL:0002041,1.06e-09,1;CL:0000819,2.08e-09,1;CL:0000182,9.52e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.31e-17!239;DOID:162!2.24e-17!235;DOID:2531!4.23e-16!51;DOID:0060083!4.23e-16!51;DOID:0050686!9.32e-15!137;DOID:1240!1.58e-12!39;DOID:8692!4.37e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.30e-09;1!DOID:8675;1.30e-09;1!DOID:2355;1.30e-09;1!DOID:0060058;5.43e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.17e-10,1;DOID:0060073,2.08e-09,1;DOID:8675,2.08e-09,1;DOID:2531,2.60e-09,51;DOID:0060083,2.60e-09,51;DOID:0060058,5.38e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.30e-09;1!UBERON:0001343;1.30e-09;1!UBERON:0004910;1.30e-09;1!UBERON:0004813;1.30e-09;1!UBERON:0002331;2.88e-08;10!UBERON:0000945;1.55e-07;5!UBERON:0010039;1.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.31e-10,1;UBERON:0001343,6.31e-10,1;UBERON:0004910,6.31e-10,1;UBERON:0005154,6.31e-10,1;UBERON:0005295,6.31e-10,1;UBERON:0004813,6.31e-10,1;UBERON:0005297,6.31e-10,1;UBERON:0005294,6.31e-10,1;UBERON:0010141,6.31e-10,1;UBERON:0005891,6.31e-10,1;UBERON:0002331,3.30e-08,10;UBERON:0000358,3.30e-08,10;UBERON:0000307,3.30e-08,10;UBERON:0000091,3.30e-08,10;UBERON:0000087,3.30e-08,10;UBERON:0007010,3.30e-08,10;UBERON:0007806,3.30e-08,10;UBERON:0008780,3.30e-08,10;UBERON:0005728,3.30e-08,10 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.154934401160603,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0,0.320929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0.852449501065388,0.870627715885752,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0,0,0.213557388818567,0.423863802319124,0,0,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,1.32438929824395,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45710687191585,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0.902838299183157,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0.438519753291869,1.3071772551245,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.330037999682352,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,1.28055318027145,0.478278818186467,0.199579371432817,0,1.48171507906718,0,0,0.456469358066384,0,0,0.677167111206413,0.481764225311099,0.605399121573143,0.851692475380653,0.343505344755765,0.921722292925374,0.447352215784832,0.333698283423817,0.781552381608161,1.39203086947621,0,0.540911356951966,0.33307196799782,0,3.18138918693974,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,1.22439575525196,0.16480387422676,0,0,0,0,0.306806047506464,0.615424027305347,0.311039587661807,0,0.716084698702437,1.02314474045374,0,0,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,1.01701460117107,0.236387681767936,0.344743373241465,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0,0,0.21787692703798,0,0,0.113942055847001,0.23056390438806,0.269272933229316,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0.317873157960757,0,0,0,3.02944095638928,0,0,0,10.0817183751411,3.95404604628809,1.04421949505455,0,0,0,1.094728735294,0.978323094660449,0,0,0,0,0,4.50970258243478,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.693373365065693,0,0.0979923974143777,0,0,0.51595809741485,0.19351266257817,0.146178634172371,0.246346371159628,0,0.176512253383001,0,0,0,0.189932387867636,0,0,0,0.19980960958213,0.144090417154106,1.60351234632282,0.171594997861965,0.14405479798815,0.124252535565433,0,0.271808412147228,0,0.101998217636322,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.164831716762333,0.26961417541674,0,1.52411997718412,0,0,0.321506296930038,0.550157746388935,0.415440338029185,0.449947783103001,0,0.0607495566580247,0,0,0.0524545881349981,0.211200673038813,0.35857467866569,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0.426766918776564,0.516644938982447,0,0,0,0,0.255788742607303,0,0.786329709279482,0,0,0,0.371807292777007,0,0,0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| ||
|short_description=p@chr16:87812762..87812782,- | |short_description=p@chr16:87812762..87812782,- | ||
}} | }} |
Latest revision as of 13:12, 25 July 2015
Short description: | p@chr16:87812762..87812782, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87812762..87812782, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.31e-10 | 1 |
seminiferous tubule epithelial cell | 6.31e-10 | 1 |
Sertoli cell | 6.31e-10 | 1 |
innate effector T cell | 1.06e-09 | 1 |
immature NK T cell | 1.06e-09 | 1 |
effector T cell | 1.06e-09 | 1 |
mature NK T cell | 1.06e-09 | 1 |
immature NK T cell stage IV | 1.06e-09 | 1 |
immature NK T cell stage I | 1.06e-09 | 1 |
immature NK T cell stage II | 1.06e-09 | 1 |
immature NK T cell stage III | 1.06e-09 | 1 |
B-1 B cell | 2.08e-09 | 1 |
hepatocyte | 9.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.31e-10 | 1 |
seminiferous tubule of testis | 6.31e-10 | 1 |
epithelium of male gonad | 6.31e-10 | 1 |
epithelial cord | 6.31e-10 | 1 |
sex cord | 6.31e-10 | 1 |
seminiferous tubule epithelium | 6.31e-10 | 1 |
testis sex cord | 6.31e-10 | 1 |
genital ridge | 6.31e-10 | 1 |
primitive sex cord of indifferent gonad | 6.31e-10 | 1 |
coelomic epithelium | 6.31e-10 | 1 |
umbilical cord | 3.30e-08 | 10 |
blastocyst | 3.30e-08 | 10 |
blastula | 3.30e-08 | 10 |
bilaminar disc | 3.30e-08 | 10 |
inner cell mass | 3.30e-08 | 10 |
cleaving embryo | 3.30e-08 | 10 |
connecting stalk | 3.30e-08 | 10 |
inner cell mass derived epiblast | 3.30e-08 | 10 |
extraembryonic mesoderm | 3.30e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
anemia | 8.17e-10 | 1 |
lymphatic system cancer | 2.08e-09 | 1 |
lymphosarcoma | 2.08e-09 | 1 |
hematologic cancer | 2.60e-09 | 51 |
immune system cancer | 2.60e-09 | 51 |
lymphoma | 5.38e-08 | 10 |