FFCP PHASE1:Hg19::chr17:38978257..38978272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3858 | |EntrezGene=3858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6413 | |HGNC=6413 | ||
|TSSclassifier=strong | |||
|UniProt=P13645 | |UniProt=P13645 | ||
|association_with_transcript=-9bp_to_M77663_5end | |association_with_transcript=-9bp_to_M77663_5end | ||
|cluster_id=chr17:38978257..38978272,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_6_at_KRT10_5end | |description=CAGE_peak_6_at_KRT10_5end | ||
|id=chr17:38978257..38978272,- | |id=chr17:38978257..38978272,- | ||
|ontology_enrichment_celltype=CL:0000622!1.14e-22!5;CL:0002623!9.79e-22!3;CL:0002150!1.71e-20!3;CL:0000861!1.71e-20!3;CL:0000154!6.28e-19!6;CL:0001014!7.93e-15!2;CL:0001016!7.93e-15!2;CL:0000150!1.13e-12!9;CL:0000362!6.11e-08!8 | |ontology_enrichment_celltype=CL:0000622!1.14e-22!5;CL:0002623!9.79e-22!3;CL:0002150!1.71e-20!3;CL:0000861!1.71e-20!3;CL:0000154!6.28e-19!6;CL:0001014!7.93e-15!2;CL:0001016!7.93e-15!2;CL:0000150!1.13e-12!9;CL:0000362!6.11e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.00e-57;5!CL:0002623;9.53e-55;3!CL:0000154;3.25e-48;6!CL:0000150;2.42e-32;9!CL:0001014;2.07e-10;2!CL:0001016;2.07e-10;2!CL:0000317;3.13e-10;2!CL:1000448;3.13e-10;2!CL:0002308;3.13e-10;2!CL:0002140;3.13e-10;2!CL:0002251;8.19e-09;20!CL:0000151;8.29e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,8.66e-58,5;CL:0002623,1.04e-54,3;CL:0000154,2.88e-48,6;CL:0000150,2.23e-32,9;CL:0001014,2.07e-10,2;CL:0001016,2.07e-10,2;CL:0000317,2.72e-10,2;CL:1000448,2.72e-10,2;CL:0002308,2.72e-10,2;CL:0002140,2.72e-10,2;CL:0002251,8.30e-09,20;CL:0000151,2.21e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.56e-19;1!UBERON:0000358;2.47e-19;1 | |||
|ontology_enrichment_disease=DOID:3151!3.34e-08!1;DOID:3149!3.34e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.28e-19;1!DOID:3149;4.28e-19;1!DOID:3451;3.13e-10;2!DOID:4159;3.13e-10;2!DOID:0060122;3.13e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;8.14e-28;6!UBERON:0003293;8.14e-28;6!UBERON:0003294;8.14e-28;6!UBERON:0010047;8.14e-28;6!UBERON:0003408;8.14e-28;6!UBERON:0000167;8.14e-28;6!UBERON:0007029;1.08e-19;1!UBERON:0000989;1.56e-19;1!UBERON:0008811;1.56e-19;1!UBERON:0000014;4.92e-19;4!UBERON:0001041;2.48e-12;14!UBERON:0002419;3.13e-10;2!UBERON:0007771;3.13e-10;2!UBERON:0003297;3.13e-10;2!UBERON:0001821;3.13e-10;2!UBERON:0003487;3.13e-10;2!UBERON:0001820;3.13e-10;2!UBERON:0002365;5.46e-10;31!UBERON:0002330;5.46e-10;31!UBERON:0000161;3.02e-09;19!UBERON:0000166;3.02e-09;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.52e-28,6;UBERON:0003293,8.52e-28,6;UBERON:0003294,8.52e-28,6;UBERON:0010047,8.52e-28,6;UBERON:0000167,8.52e-28,6;UBERON:0007029,1.08e-19,1;UBERON:0000989,1.56e-19,1;UBERON:0008811,1.56e-19,1;UBERON:0006258,1.56e-19,1;UBERON:0005876,1.56e-19,1;UBERON:0004874,1.56e-19,1;UBERON:0000014,5.64e-19,4;UBERON:0003408,5.55e-17,10;UBERON:0002419,2.72e-10,2;UBERON:0007771,2.72e-10,2;UBERON:0003297,2.72e-10,2;UBERON:0001821,2.72e-10,2;UBERON:0003487,2.72e-10,2;UBERON:0001820,2.72e-10,2;UBERON:0005089,2.72e-10,2;UBERON:0005088,2.72e-10,2;UBERON:0002365,1.10e-09,31;UBERON:0002330,1.10e-09,31;UBERON:0000166,4.66e-08,22 | |||
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|short_description=p6@KRT10 | |short_description=p6@KRT10 | ||
}} | }} |
Latest revision as of 03:53, 20 September 2015
Short description: | p6@KRT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KRT10_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -9bp_to_M77663_5end |
EntrezGene: | KRT10 |
HGNC: | 6413 |
UniProt: | P13645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 8.66e-58 | 5 |
acinar cell of salivary gland | 1.04e-54 | 3 |
protein secreting cell | 2.88e-48 | 6 |
glandular epithelial cell | 2.23e-32 | 9 |
CD1a-positive Langerhans cell | 2.07e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.07e-10 | 2 |
sebum secreting cell | 2.72e-10 | 2 |
epithelial cell of sweat gland | 2.72e-10 | 2 |
epithelial cell of skin gland | 2.72e-10 | 2 |
acinar cell of sebaceous gland | 2.72e-10 | 2 |
epithelial cell of alimentary canal | 8.30e-09 | 20 |
secretory cell | 2.21e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.52e-28 | 6 |
gland of oral region | 8.52e-28 | 6 |
gland of foregut | 8.52e-28 | 6 |
oral gland | 8.52e-28 | 6 |
oral cavity | 8.52e-28 | 6 |
surface | 1.08e-19 | 1 |
penis | 1.56e-19 | 1 |
intromittent organ | 1.56e-19 | 1 |
lateral plate mesenchyme | 1.56e-19 | 1 |
undifferentiated genital tubercle | 1.56e-19 | 1 |
somatopleure | 1.56e-19 | 1 |
zone of skin | 5.64e-19 | 4 |
gland of gut | 5.55e-17 | 10 |
skin gland | 2.72e-10 | 2 |
epidermis gland | 2.72e-10 | 2 |
gland of integumental system | 2.72e-10 | 2 |
sebaceous gland | 2.72e-10 | 2 |
skin sebaceous gland | 2.72e-10 | 2 |
sweat gland | 2.72e-10 | 2 |
sweat gland placode | 2.72e-10 | 2 |
sebaceous gland placode | 2.72e-10 | 2 |
exocrine gland | 1.10e-09 | 31 |
exocrine system | 1.10e-09 | 31 |
oral opening | 4.66e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |