FFCP PHASE1:Hg19::chr12:123465218..123465275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51329 | |EntrezGene=51329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18076 | |HGNC=18076 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEP2 | |UniProt=F8WEP2 | ||
|association_with_transcript=0bp_to_ENST00000412505,ENST00000442210,ENST00000536502,ENST00000539576,ENST00000540708,uc001ueh.2_5end | |association_with_transcript=0bp_to_ENST00000412505,ENST00000442210,ENST00000536502,ENST00000539576,ENST00000540708,uc001ueh.2_5end | ||
|cluster_id=chr12:123465218..123465275,+ | |||
|description=CAGE_peak_1_at_ARL6IP4_5end | |description=CAGE_peak_1_at_ARL6IP4_5end | ||
|id=chr12:123465218..123465275,+ | |id=chr12:123465218..123465275,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.47e-08!119;CL:0000220!9.62e-08!246;CL:0002078!1.22e-07!44;CL:0000071!1.32e-07!18;CL:0002546!1.32e-07!18;CL:0000066!2.66e-07!254;CL:0002321!3.11e-07!248 | |ontology_enrichment_celltype=CL:0000222!1.47e-08!119;CL:0000220!9.62e-08!246;CL:0002078!1.22e-07!44;CL:0000071!1.32e-07!18;CL:0002546!1.32e-07!18;CL:0000066!2.66e-07!254;CL:0002321!3.11e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.34e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.74e-08,121;CL:0002078,6.38e-08,45;CL:0000071,1.32e-07,18;CL:0002546,1.32e-07,18;CL:0000066,1.72e-07,253;CL:0002321,3.20e-07,250;CL:0000115,6.80e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.34e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.43e-10!118;UBERON:0003104!5.34e-10!238;UBERON:0009142!5.34e-10!238;UBERON:0000055!6.08e-09!69;UBERON:0001981!6.88e-09!60;UBERON:0007500!6.88e-09!60;UBERON:0004537!6.88e-09!60;UBERON:0006965!6.88e-09!60;UBERON:0006914!2.48e-08!25;UBERON:0000487!9.50e-08!22;UBERON:0004872!1.10e-07!84;UBERON:0001986!1.32e-07!18;UBERON:0004638!1.32e-07!18;UBERON:0004852!1.32e-07!18;UBERON:0002049!3.91e-07!79;UBERON:0007798!3.91e-07!79;UBERON:0005256!4.78e-07!143;UBERON:0002100!5.50e-07!216;UBERON:0000490!5.93e-07!138;UBERON:0005177!9.63e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;2.49e-08;25!UBERON:0000487;9.68e-08;22!UBERON:0004638;1.34e-07;18!UBERON:0001986;1.34e-07;18!UBERON:0004852;1.34e-07;18!UBERON:0003914;7.81e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.25e-11,117;UBERON:0000055,1.08e-08,68;UBERON:0007500,1.25e-08,59;UBERON:0001981,1.25e-08,59;UBERON:0004537,1.25e-08,59;UBERON:0006965,1.25e-08,59;UBERON:0006914,2.48e-08,25;UBERON:0000487,9.50e-08,22;UBERON:0004638,1.32e-07,18;UBERON:0001986,1.32e-07,18;UBERON:0004852,1.32e-07,18;UBERON:0002100,1.57e-07,199;UBERON:0000490,1.78e-07,148;UBERON:0004872,1.85e-07,83;UBERON:0005177,2.47e-07,101;UBERON:0007503,3.08e-07,78;UBERON:0002049,6.52e-07,78;UBERON:0007798,6.52e-07,78 | |||
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| ||
|short_description=p1@ARL6IP4 | |short_description=p1@ARL6IP4 | ||
}} | }} |
Latest revision as of 01:10, 17 September 2015
Short description: | p1@ARL6IP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARL6IP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412505, ENST00000442210, ENST00000536502, ENST00000539576, ENST00000540708, uc001ueh.2_5end |
EntrezGene: | ARL6IP4 |
HGNC: | 18076 |
UniProt: | F8WEP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.74e-08 | 121 |
meso-epithelial cell | 6.38e-08 | 45 |
blood vessel endothelial cell | 1.32e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.32e-07 | 18 |
epithelial cell | 1.72e-07 | 253 |
embryonic cell | 3.20e-07 | 250 |
endothelial cell | 6.80e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.25e-11 | 117 |
vessel | 1.08e-08 | 68 |
epithelial tube open at both ends | 1.25e-08 | 59 |
blood vessel | 1.25e-08 | 59 |
blood vasculature | 1.25e-08 | 59 |
vascular cord | 1.25e-08 | 59 |
squamous epithelium | 2.48e-08 | 25 |
simple squamous epithelium | 9.50e-08 | 22 |
blood vessel endothelium | 1.32e-07 | 18 |
endothelium | 1.32e-07 | 18 |
cardiovascular system endothelium | 1.32e-07 | 18 |
trunk | 1.57e-07 | 199 |
unilaminar epithelium | 1.78e-07 | 148 |
splanchnic layer of lateral plate mesoderm | 1.85e-07 | 83 |
trunk region element | 2.47e-07 | 101 |
epithelial vesicle | 3.08e-07 | 78 |
vasculature | 6.52e-07 | 78 |
vascular system | 6.52e-07 | 78 |