FFCP PHASE1:Hg19::chr17:47074581..47074597,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10642 | |EntrezGene=10642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28866 | |HGNC=28866 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZI8,C9JT33 | |UniProt=Q9NZI8,C9JT33 | ||
|association_with_transcript=-176bp_to_ENST00000290341,NM_001160423,NM_006546,uc002iom.2,uc010dbj.2_5end | |association_with_transcript=-176bp_to_ENST00000290341,NM_001160423,NM_006546,uc002iom.2,uc010dbj.2_5end | ||
|cluster_id=chr17:47074581..47074597,+ | |||
|coexpression_cluster_id=C2416 | |||
|description=CAGE_peak_5_at_IGF2BP1_5end | |description=CAGE_peak_5_at_IGF2BP1_5end | ||
|id=chr17:47074581..47074597,+ | |id=chr17:47074581..47074597,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.56e-08!7;CL:0000586!1.56e-08!7;CL:0002322!1.66e-08!5;CL:0000133!2.98e-07!59;CL:0002319!3.61e-07!25 | |ontology_enrichment_celltype=CL:0000039!1.56e-08!7;CL:0000586!1.56e-08!7;CL:0002322!1.66e-08!5;CL:0000133!2.98e-07!59;CL:0002319!3.61e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002321;3.37e-21;15!CL:0002322;6.28e-21;5!CL:0000333;8.06e-14;5!CL:0000540;3.28e-07;6!CL:0000404;3.28e-07;6!CL:0002319;8.82e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.56e-21,5;CL:0000133,2.16e-10,59;CL:0000333,1.72e-09,41;CL:0000221,4.87e-08,72;CL:0000540,3.29e-07,6;CL:0000031,3.29e-07,6;CL:0000404,3.29e-07,6;CL:0002319,8.21e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.28e-07;6 | |||
|ontology_enrichment_disease=DOID:162!1.49e-22!235;DOID:14566!1.50e-21!239;DOID:3095!3.92e-18!22;DOID:2994!3.92e-18!22;DOID:0050687!8.24e-18!143;DOID:171!8.97e-10!10;DOID:305!1.65e-08!106;DOID:3093!8.23e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:171;5.15e-26;10!DOID:3095;1.08e-24;22!DOID:2994;1.08e-24;22!DOID:169;1.57e-11;6!DOID:3093;1.66e-08;11!DOID:1036;1.69e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.51e-26,10;DOID:3095,1.07e-24,22;DOID:2994,1.07e-24,22;DOID:162,1.80e-12,235;DOID:14566,4.71e-12,239;DOID:169,1.51e-11,6;DOID:0050687,7.73e-10,143;DOID:3093,1.48e-08,11;DOID:1036,1.83e-08,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.35e-17;4!UBERON:0000923;2.35e-17;4!UBERON:0010316;2.35e-17;4!UBERON:0005291;2.35e-17;4!UBERON:0002050;6.61e-14;5!UBERON:0005423;6.61e-14;5!UBERON:0000013;8.06e-14;5!UBERON:0002410;8.06e-14;5!UBERON:0000010;1.06e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.68e-14,5;UBERON:0002410,7.68e-14,5;UBERON:0000010,1.04e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.753255837568817,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51302712679503,4.10842281796604,3.25343040034651,2.38420426535352,2.77552935963191,8.39447925874409,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.441175890929576,0,0.237270619111097,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0,0,2.21379189377604,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,6.28469137876436,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,1.64007322849853,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0.783399478865116,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0,1.09224469574562,0,0,0,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03974301488088,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.538545866458633,1.3037684630641,0,0,0,0,0,0,1.1279783030859,3.33306308340157,3.69207491346854,4.17458211993207,0,0,0,11.5909518575831,0.649165919226273,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0.622129148383483,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0.146178634172371,0.246346371159628,0,0,0,0.137041924646751,0.794858446811959,0,0.782205530939212,0,0,0,0,0.916292769327325,0,0,0,0,2.44627570932505,0.941425616810999,0,2.60055530911367,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,13.1567914453064,11.2085567398386,10.7171634728154,0.885847333632739,0,0,0,5.14410075088061,6.32681408347275,13.7095311549631,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0.170388021785422,0.339936274560377,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,2.49027542885215,0.124980407962107,0.303298235083296,0.285465333544967,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,0,0.260994291965212,0,0.463044948647668,0.97894681802587,0.358177682162975,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0,0,2.17420431216208,0,13.8394028833189,1.74735421107222,1.01839517972415,6.58982252315217,9.04731079090716,8.37967376959866,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0.943757786781923,0,0,0,0,0.198916222116275,0,1.41193548092464,0,1.30953347240711,0,0,0,0,0,0,0,0,0,4.92439484206938,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,3.79232668158544,0.813689977576877,3.12944890144643,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,3.51809653585373,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0,0,0,0,0.788857810965923,0,0,0,0,0,0,3.78499274505237,2.18531143927391,1.64708051314868,0.61193297845189,0.534434810531121,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0.372448285775147,0,0,0,0,0,0,0,0,0,1.81436487992116,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.753255837568817,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51302712679503,4.10842281796604,3.25343040034651,2.38420426535352,2.77552935963191,8.39447925874409,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.441175890929576,0,0.237270619111097,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0,0,2.21379189377604,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,6.28469137876436,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,1.64007322849853,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0.783399478865116,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0,1.09224469574562,0,0,0,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03974301488088,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.538545866458633,1.3037684630641,0,0,0,0,0,0,1.1279783030859,3.33306308340157,3.69207491346854,4.17458211993207,0,0,0,11.5909518575831,0.649165919226273,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0.622129148383483,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0.146178634172371,0.246346371159628,0,0,0,0.137041924646751,0.794858446811959,0,0.782205530939212,0,0,0,0,0.916292769327325,0,0,0,0,2.44627570932505,0.941425616810999,0,2.60055530911367,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,13.1567914453064,11.2085567398386,10.7171634728154,0.885847333632739,0,0,0,5.14410075088061,6.32681408347275,13.7095311549631,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0.170388021785422,0.339936274560377,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,2.49027542885215,0.124980407962107,0.303298235083296,0.285465333544967,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,0,0.260994291965212,0,0.463044948647668,0.97894681802587,0.358177682162975,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0,0,2.17420431216208,0,13.8394028833189,1.74735421107222,1.01839517972415,6.58982252315217,9.04731079090716,8.37967376959866,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0.943757786781923,0,0,0,0,0.198916222116275,0,1.41193548092464,0,1.30953347240711,0,0,0,0,0,0,0,0,0,4.92439484206938,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,3.79232668158544,0.813689977576877,3.12944890144643,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,3.51809653585373,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0,0,0,0,0.788857810965923,0,0,0,0,0,0,3.78499274505237,2.18531143927391,1.64708051314868,0.61193297845189,0.534434810531121,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0.372448285775147,0,0,0,0,0,0,0,0,0,1.81436487992116,0,0,0,0,0,0,0,0 | ||
|short_description=p5@IGF2BP1 | |short_description=p5@IGF2BP1 | ||
}} | }} |
Latest revision as of 19:37, 15 September 2015
Short description: | p5@IGF2BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGF2BP1_5end |
Coexpression cluster: | C2416_peripheral_iPS_hepatocellular_carcinoid_small_colon_HES3GFP |
Association with transcript: | -176bp_to_ENST00000290341, NM_001160423, NM_006546, uc002iom.2, uc010dbj.2_5end |
EntrezGene: | IGF2BP1 |
HGNC: | 28866 |
UniProt: | Q9NZI8C9JT33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.56e-21 | 5 |
neurectodermal cell | 2.16e-10 | 59 |
migratory neural crest cell | 1.72e-09 | 41 |
ectodermal cell | 4.87e-08 | 72 |
neuron | 3.29e-07 | 6 |
neuroblast | 3.29e-07 | 6 |
electrically signaling cell | 3.29e-07 | 6 |
neural cell | 8.21e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.68e-14 | 5 |
autonomic nervous system | 7.68e-14 | 5 |
peripheral nervous system | 1.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.51e-26 | 10 |
germ cell and embryonal cancer | 1.07e-24 | 22 |
germ cell cancer | 1.07e-24 | 22 |
cancer | 1.80e-12 | 235 |
disease of cellular proliferation | 4.71e-12 | 239 |
neuroendocrine tumor | 1.51e-11 | 6 |
cell type cancer | 7.73e-10 | 143 |
nervous system cancer | 1.48e-08 | 11 |
chronic leukemia | 1.83e-08 | 8 |