FFCP PHASE1:Hg19::chr10:90751038..90751131,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:90751038..90751131,-
|short_description=p2@ACTA2
|description=CAGE_peak_2_at_ACTA2_5end
|association_with_transcript=0bp_to_ENST00000415557,ENST0000045815...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59 | |EntrezGene=59 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |HGNC=130 | ||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |UniProt=F6UVQ4 | ||
|association_with_transcript=0bp_to_ENST00000415557,ENST00000458159_5end | |||
|cluster_id=chr10:90751038..90751131,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_ACTA2_5end | |||
|id=chr10:90751038..90751131,- | |||
|ontology_enrichment_celltype=CL:0000055!4.03e-31!180;CL:0000183!1.84e-22!59;CL:0000187!4.15e-21!54;CL:0000680!7.90e-21!57;CL:0000056!7.90e-21!57;CL:0000355!7.90e-21!57;CL:0000057!6.10e-19!75;CL:0000192!1.27e-17!42;CL:0000514!1.27e-17!42;CL:0000222!5.57e-17!119;CL:0000393!3.65e-16!60;CL:0000211!3.65e-16!60;CL:0000359!3.43e-13!32;CL:0002371!3.47e-13!591;CL:0000144!3.15e-10!625;CL:0002620!3.05e-08!23;CL:0000220!1.65e-07!246;CL:0000048!3.04e-07!430;CL:0002494!4.07e-07!16;CL:0002321!5.25e-07!248;CL:0000723!8.38e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.85e-13;43!CL:0000359;1.27e-12;32!CL:0000187;5.41e-12;55!CL:0000393;5.36e-09;61!CL:0000211;5.36e-09;61!CL:0002620;3.07e-08;23!CL:0000057;6.06e-08;73!CL:0002494;3.87e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.60e-22,55;CL:0000680,1.67e-21,58;CL:0000056,1.67e-21,58;CL:0000355,1.67e-21,58;CL:0000057,1.69e-19,76;CL:0000192,2.67e-18,43;CL:0000514,2.67e-18,43;CL:0000222,1.91e-17,121;CL:0000393,1.01e-16,61;CL:0000211,1.01e-16,61;CL:0000359,3.32e-13,32;CL:0002620,2.99e-08,23;CL:0000048,7.15e-08,427;CL:0000723,1.91e-07,433;CL:0002321,2.56e-07,250;CL:0002494,4.01e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-13;43!CL:0000355;1.65e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.46e-22!70;UBERON:0000914!9.01e-22!83;UBERON:0002329!9.01e-22!83;UBERON:0003077!9.01e-22!83;UBERON:0003059!9.01e-22!83;UBERON:0007282!9.01e-22!83;UBERON:0009618!9.01e-22!83;UBERON:0007285!9.01e-22!83;UBERON:0000486!1.12e-19!82;UBERON:0001134!4.91e-19!61;UBERON:0002036!4.91e-19!61;UBERON:0003082!4.91e-19!61;UBERON:0002385!1.58e-18!63;UBERON:0001015!1.58e-18!63;UBERON:0000383!1.58e-18!63;UBERON:0005256!1.23e-17!143;UBERON:0004535!2.33e-17!110;UBERON:0001009!6.54e-17!113;UBERON:0004872!2.06e-16!84;UBERON:0002049!4.52e-14!79;UBERON:0007798!4.52e-14!79;UBERON:0001637!9.33e-13!42;UBERON:0003509!9.33e-13!42;UBERON:0004572!9.33e-13!42;UBERON:0003914!1.24e-12!118;UBERON:0002100!3.32e-12!216;UBERON:0001981!8.40e-12!60;UBERON:0007500!8.40e-12!60;UBERON:0004537!8.40e-12!60;UBERON:0006965!8.40e-12!60;UBERON:0000055!1.01e-11!69;UBERON:0004573!2.73e-10!33;UBERON:0004571!2.73e-10!33;UBERON:0000490!1.62e-09!138;UBERON:0003102!4.79e-09!95;UBERON:0002199!7.61e-09!45;UBERON:0002416!7.61e-09!45;UBERON:0000475!9.25e-09!365;UBERON:0003104!5.20e-08!238;UBERON:0009142!5.20e-08!238;UBERON:0000926!2.42e-07!448;UBERON:0004120!2.42e-07!448;UBERON:0006603!2.42e-07!448;UBERON:0001013!3.76e-07!14;UBERON:0003103!6.21e-07!69;UBERON:0001135!8.80e-07!15;UBERON:0002097!9.17e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.49e-09;33!UBERON:0004571;2.49e-09;33!UBERON:0001637;6.86e-09;42!UBERON:0003509;6.86e-09;42!UBERON:0004572;6.86e-09;42!UBERON:0001013;3.67e-07;14!UBERON:0002385;6.37e-07;31!UBERON:0001015;6.37e-07;31!UBERON:0000383;6.37e-07;31!UBERON:0001135;9.19e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.41e-23,78;UBERON:0002329,1.41e-22,71;UBERON:0003059,1.41e-22,71;UBERON:0007282,1.41e-22,71;UBERON:0004290,1.41e-22,71;UBERON:0009618,1.41e-22,71;UBERON:0007524,3.81e-22,73;UBERON:0003077,5.54e-22,72;UBERON:0007285,5.54e-22,72;UBERON:0000486,3.49e-20,83;UBERON:0001134,1.10e-19,62;UBERON:0002036,1.10e-19,62;UBERON:0003082,1.10e-19,62;UBERON:0002385,3.64e-19,64;UBERON:0001015,3.64e-19,64;UBERON:0000383,3.64e-19,64;UBERON:0003104,6.68e-18,160;UBERON:0009142,6.68e-18,160;UBERON:0004535,6.79e-17,109;UBERON:0001009,1.87e-16,112;UBERON:0005256,6.03e-16,122;UBERON:0004872,6.31e-16,83;UBERON:0002049,1.33e-13,78;UBERON:0007798,1.33e-13,78;UBERON:0000926,2.64e-13,315;UBERON:0004120,2.64e-13,315;UBERON:0006603,2.64e-13,315;UBERON:0001637,9.03e-13,42;UBERON:0003509,9.03e-13,42;UBERON:0004572,9.03e-13,42;UBERON:0003914,3.09e-12,117;UBERON:0000490,3.53e-12,148;UBERON:0002100,1.99e-11,199;UBERON:0007500,2.50e-11,59;UBERON:0001981,2.50e-11,59;UBERON:0004537,2.50e-11,59;UBERON:0006965,2.50e-11,59;UBERON:0000055,2.88e-11,68;UBERON:0004573,2.66e-10,33;UBERON:0004571,2.66e-10,33;UBERON:0002199,2.21e-09,46;UBERON:0002416,2.21e-09,46;UBERON:0003102,7.02e-09,99;UBERON:0002097,2.92e-07,41;UBERON:0001013,3.70e-07,14;UBERON:0001135,8.66e-07,15 | |||
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| ||
|short_description=p2@ACTA2 | |||
}} | }} |
Latest revision as of 20:53, 19 September 2015
Short description: | p2@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACTA2_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000415557, ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.60e-22 | 55 |
muscle precursor cell | 1.67e-21 | 58 |
myoblast | 1.67e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.67e-21 | 58 |
fibroblast | 1.69e-19 | 76 |
smooth muscle cell | 2.67e-18 | 43 |
smooth muscle myoblast | 2.67e-18 | 43 |
mesodermal cell | 1.91e-17 | 121 |
electrically responsive cell | 1.01e-16 | 61 |
electrically active cell | 1.01e-16 | 61 |
vascular associated smooth muscle cell | 3.32e-13 | 32 |
skin fibroblast | 2.99e-08 | 23 |
multi fate stem cell | 7.15e-08 | 427 |
somatic stem cell | 1.91e-07 | 433 |
embryonic cell | 2.56e-07 | 250 |
cardiocyte | 4.01e-07 | 16 |