FFCP PHASE1:Hg19::chr12:46662553..46662572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |HGNC=13447 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000551506_5end | |association_with_transcript=16bp_to_ENST00000551506_5end | ||
|cluster_id=chr12:46662553..46662572,- | |||
|coexpression_cluster_id=C3280 | |||
|description=CAGE_peak_8_at_SLC38A1_5end | |description=CAGE_peak_8_at_SLC38A1_5end | ||
|id=chr12:46662553..46662572,- | |id=chr12:46662553..46662572,- | ||
|ontology_enrichment_celltype=CL:0000066!1.48e-15!254;CL:0000548!1.28e-08!679;CL:0000004!1.28e-08!679;CL:0000255!1.28e-08!679;CL:0002076!1.29e-08!43;CL:0000012!2.58e-08!682;CL:0000223!1.61e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.48e-15!254;CL:0000548!1.28e-08!679;CL:0000004!1.28e-08!679;CL:0000255!1.28e-08!679;CL:0002076!1.29e-08!43;CL:0000012!2.58e-08!682;CL:0000223!1.61e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.54e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.53e-15,253;CL:0002076,2.29e-09,42;CL:0000223,3.72e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.92e-24!239;DOID:162!8.20e-24!235;DOID:0050687!7.93e-19!143;DOID:305!1.32e-15!106;DOID:0050686!4.27e-13!137 | |ontology_enrichment_disease=DOID:14566!2.92e-24!239;DOID:162!8.20e-24!235;DOID:0050687!7.93e-19!143;DOID:305!1.32e-15!106;DOID:0050686!4.27e-13!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.19e-24,239;DOID:162,5.58e-24,235;DOID:0050687,5.05e-19,143;DOID:305,9.87e-16,106;DOID:0050686,3.32e-13,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.47e-07!169;UBERON:0000925!9.47e-07!169;UBERON:0006595!9.47e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@SLC38A1 | |short_description=p8@SLC38A1 | ||
}} | }} |
Latest revision as of 10:48, 18 September 2015
Short description: | p8@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC38A1_5end |
Coexpression cluster: | C3280_acute_somatostatinoma_neuroblastoma_small_choriocarcinoma_bile_signet |
Association with transcript: | 16bp_to_ENST00000551506_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.53e-15 | 253 |
endo-epithelial cell | 2.29e-09 | 42 |
endodermal cell | 3.72e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.19e-24 | 239 |
cancer | 5.58e-24 | 235 |
cell type cancer | 5.05e-19 | 143 |
carcinoma | 9.87e-16 | 106 |
organ system cancer | 3.32e-13 | 137 |