FFCP PHASE1:Hg19::chr12:53045991..53045996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3849 | |EntrezGene=3849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6439 | |HGNC=6439 | ||
|TSSclassifier=strong | |||
|UniProt=P35908 | |UniProt=P35908 | ||
|association_with_transcript=-32bp_to_NM_000423,uc001sat.2_5end | |association_with_transcript=-32bp_to_NM_000423,uc001sat.2_5end | ||
|cluster_id=chr12:53045991..53045996,- | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_1_at_KRT2_5end | |description=CAGE_peak_1_at_KRT2_5end | ||
|id=chr12:53045991..53045996,- | |id=chr12:53045991..53045996,- | ||
|ontology_enrichment_celltype=CL:0001014!8.70e-23!2;CL:0001016!8.70e-23!2;CL:0000453!1.10e-09!5;CL:0000840!3.27e-08!5;CL:0001029!3.27e-08!5 | |ontology_enrichment_celltype=CL:0001014!8.70e-23!2;CL:0001016!8.70e-23!2;CL:0000453!1.10e-09!5;CL:0000840!3.27e-08!5;CL:0001029!3.27e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.99e-41;2!CL:0001016;3.99e-41;2!CL:0000453;3.95e-17;5!CL:0000840;1.90e-14;5!CL:0000990;5.93e-10;8!CL:0000451;2.62e-08;10!CL:0002623;5.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.99e-41,2;CL:0001016,3.99e-41,2;CL:0000453,3.95e-17,5;CL:0000840,1.90e-14,5;CL:0001029,1.90e-14,5;CL:0000990,5.93e-10,8;CL:0000451,2.62e-08,10;CL:0002623,5.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.16e-21;1!UBERON:0008814;2.88e-11;2!UBERON:0010056;2.88e-11;2 | |||
|ontology_enrichment_disease=DOID:3151!1.32e-11!1;DOID:3149!1.32e-11!1 | |ontology_enrichment_disease=DOID:3151!1.32e-11!1;DOID:3149!1.32e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!3.63e-17!10;UBERON:0009145!3.63e-17!10;UBERON:0006562!1.24e-15!11;UBERON:0007029!3.65e-12!1;UBERON:0000989!5.05e-12!1;UBERON:0008811!5.05e-12!1;UBERON:0006258!5.05e-12!1;UBERON:0005876!5.05e-12!1;UBERON:0004874!5.05e-12!1;UBERON:0006834!6.97e-12!1;UBERON:0002372!9.61e-12!1;UBERON:0001961!9.61e-12!1;UBERON:0001744!9.61e-12!1;UBERON:0001735!9.61e-12!1;UBERON:0002370!1.47e-11!4;UBERON:0005058!1.47e-11!4;UBERON:0009113!1.47e-11!4;UBERON:0003295!1.47e-11!4;UBERON:0005562!1.47e-11!4;UBERON:0000014!1.73e-11!4;UBERON:0003408!3.41e-10!10;UBERON:0000974!5.44e-10!10;UBERON:0001557!3.84e-09!19;UBERON:0003351!5.36e-08!6;UBERON:0000002!5.95e-08!6;UBERON:0001560!5.95e-08!6;UBERON:0005795!7.71e-08!22;UBERON:0004177!5.67e-07!7;UBERON:0008814!6.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.40e-40;2!UBERON:0005058;7.40e-40;2!UBERON:0009113;7.40e-40;2!UBERON:0007029;2.55e-21;1!UBERON:0000989;5.16e-21;1!UBERON:0008811;5.16e-21;1!UBERON:0006834;8.53e-21;1!UBERON:0004177;1.26e-16;5!UBERON:0005057;1.26e-16;5!UBERON:0001723;6.13e-08;3!UBERON:0001033;6.13e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.82e-21,1;UBERON:0000989,5.16e-21,1;UBERON:0008811,5.16e-21,1;UBERON:0006258,5.16e-21,1;UBERON:0005876,5.16e-21,1;UBERON:0004874,5.16e-21,1;UBERON:0006834,9.43e-21,1;UBERON:0002370,1.56e-20,4;UBERON:0005058,1.56e-20,4;UBERON:0009113,1.56e-20,4;UBERON:0003295,1.56e-20,4;UBERON:0005562,1.56e-20,4;UBERON:0003408,2.06e-18,10;UBERON:0001042,2.33e-18,10;UBERON:0009145,2.33e-18,10;UBERON:0006562,9.29e-17,11;UBERON:0003351,4.84e-14,6;UBERON:0004177,3.53e-12,7;UBERON:0005057,3.53e-12,7;UBERON:0008814,1.67e-10,18;UBERON:0001557,5.52e-10,19;UBERON:0000974,8.28e-09,10;UBERON:0009722,4.34e-08,11;UBERON:0007690,4.34e-08,11;UBERON:0001723,5.93e-08,3;UBERON:0001033,5.93e-08,3;UBERON:0010056,5.93e-08,3 | |||
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|short_description=p1@KRT2 | |short_description=p1@KRT2 | ||
}} | }} |
Latest revision as of 00:05, 19 September 2015
Short description: | p1@KRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT2_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | -32bp_to_NM_000423, uc001sat.2_5end |
EntrezGene: | KRT2 |
HGNC: | 6439 |
UniProt: | P35908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.99e-41 | 2 |
immature CD1a-positive Langerhans cell | 3.99e-41 | 2 |
Langerhans cell | 3.95e-17 | 5 |
immature conventional dendritic cell | 1.90e-14 | 5 |
common dendritic progenitor | 1.90e-14 | 5 |
conventional dendritic cell | 5.93e-10 | 8 |
dendritic cell | 2.62e-08 | 10 |
acinar cell of salivary gland | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 2.82e-21 | 1 |
penis | 5.16e-21 | 1 |
intromittent organ | 5.16e-21 | 1 |
lateral plate mesenchyme | 5.16e-21 | 1 |
undifferentiated genital tubercle | 5.16e-21 | 1 |
somatopleure | 5.16e-21 | 1 |
uterus or analog | 9.43e-21 | 1 |
thymus | 1.56e-20 | 4 |
hemolymphoid system gland | 1.56e-20 | 4 |
thymic region | 1.56e-20 | 4 |
pharyngeal gland | 1.56e-20 | 4 |
thymus primordium | 1.56e-20 | 4 |
gland of gut | 2.06e-18 | 10 |
chordate pharynx | 2.33e-18 | 10 |
pharyngeal region of foregut | 2.33e-18 | 10 |
pharynx | 9.29e-17 | 11 |
pharyngeal epithelium | 4.84e-14 | 6 |
hemopoietic organ | 3.53e-12 | 7 |
immune organ | 3.53e-12 | 7 |
pharyngeal arch system | 1.67e-10 | 18 |
upper respiratory tract | 5.52e-10 | 19 |
neck | 8.28e-09 | 10 |
entire pharyngeal arch endoderm | 4.34e-08 | 11 |
early pharyngeal endoderm | 4.34e-08 | 11 |
tongue | 5.93e-08 | 3 |
gustatory system | 5.93e-08 | 3 |
future tongue | 5.93e-08 | 3 |