FFCP PHASE1:Hg19::chr12:91502776..91502785,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4060 | |EntrezGene=4060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6724 | |HGNC=6724 | ||
|TSSclassifier=strong | |||
|UniProt=P51884 | |UniProt=P51884 | ||
|association_with_transcript=-20bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end | |association_with_transcript=-20bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end | ||
|cluster_id=chr12:91502776..91502785,- | |||
|description=CAGE_peak_15_at_LUM_5end | |description=CAGE_peak_15_at_LUM_5end | ||
|id=chr12:91502776..91502785,- | |id=chr12:91502776..91502785,- | ||
|ontology_enrichment_celltype=CL:0000153!1.89e-14!9;CL:0000447!1.89e-14!9;CL:0000499!2.83e-12!27;CL:0000667!2.16e-09!6;CL:0000058!2.16e-09!6;CL:0000138!2.16e-09!6;CL:0000327!1.14e-08!14;CL:0000135!7.41e-08!3;CL:0000386!7.41e-08!3;CL:0000388!7.41e-08!3;CL:0002541!7.31e-07!3;CL:0000214!9.10e-07!3 | |ontology_enrichment_celltype=CL:0000153!1.89e-14!9;CL:0000447!1.89e-14!9;CL:0000499!2.83e-12!27;CL:0000667!2.16e-09!6;CL:0000058!2.16e-09!6;CL:0000138!2.16e-09!6;CL:0000327!1.14e-08!14;CL:0000135!7.41e-08!3;CL:0000386!7.41e-08!3;CL:0000388!7.41e-08!3;CL:0002541!7.31e-07!3;CL:0000214!9.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000135;3.43e-34;3!CL:0000388;3.43e-34;3!CL:0000153;6.37e-20;9!CL:0000447;6.37e-20;9!CL:0000499;7.89e-19;28!CL:0000138;2.96e-17;6!CL:0000327;4.57e-12;15!CL:0002195;8.52e-07;2!CL:0002571;8.52e-07;2!CL:0002600;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.19e-34,3;CL:0000388,2.19e-34,3;CL:0000153,6.38e-20,9;CL:0000447,6.38e-20,9;CL:0000499,7.09e-19,28;CL:0000058,3.31e-17,6;CL:0000138,3.31e-17,6;CL:0000327,4.58e-12,15;CL:0002600,9.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.88e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;2.46e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.20e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!7.41e-08!3;UBERON:0003124!2.26e-07!7;UBERON:0000476!7.31e-07!3;UBERON:0000920!7.31e-07!3;UBERON:0006915!9.10e-07!3;UBERON:0002018!9.10e-07!3;UBERON:0002217!9.10e-07!3;UBERON:0007616!9.10e-07!3 | |ontology_enrichment_uberon=UBERON:0000043!7.41e-08!3;UBERON:0003124!2.26e-07!7;UBERON:0000476!7.31e-07!3;UBERON:0000920!7.31e-07!3;UBERON:0006915!9.10e-07!3;UBERON:0002018!9.10e-07!3;UBERON:0002217!9.10e-07!3;UBERON:0007616!9.10e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.43e-34;3!UBERON:0000043;3.43e-34;3!UBERON:0007845;3.43e-34;3!UBERON:0007029;2.46e-12;1!UBERON:0002135;2.46e-12;1!UBERON:0002133;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.19e-34,3;UBERON:0000043,2.19e-34,3;UBERON:0007845,2.19e-34,3;UBERON:0007029,1.25e-12,1;UBERON:0002135,3.08e-12,1;UBERON:0005631,9.03e-08,14;UBERON:0000158,9.03e-08,14;UBERON:0003124,2.15e-07,7;UBERON:0002133,9.54e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,0.722878304769133,0.50133791063589,1.01392563272577,1.5905718941022,2.91980922181582,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.558350568994769,0,0,0.252433774244115,0.736399189138395,0,0,0.302256294682921,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,1.48482340416319,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.341826167541004,0,0,0,1.5950057986596,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.799238438328521,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.747511887973863,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,3.63679717666819,0,0.171488009437418,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0.713520544665411,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,1.57771562193185,0,0,0,1.85997509083376,2.31087814315709,2.59575937274273,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0.342233301085281,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,0.722878304769133,0.50133791063589,1.01392563272577,1.5905718941022,2.91980922181582,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.558350568994769,0,0,0.252433774244115,0.736399189138395,0,0,0.302256294682921,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,1.48482340416319,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.341826167541004,0,0,0,1.5950057986596,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.799238438328521,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.747511887973863,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,3.63679717666819,0,0.171488009437418,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0.713520544665411,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,1.57771562193185,0,0,0,1.85997509083376,2.31087814315709,2.59575937274273,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0.342233301085281,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p15@LUM | |short_description=p15@LUM | ||
}} | }} |
Latest revision as of 21:03, 15 September 2015
Short description: | p15@LUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LUM_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_AB590375, BT006707, CU675507, CU690252, DQ892554, DQ895765_5end |
EntrezGene: | LUM |
HGNC: | 6724 |
UniProt: | P51884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.19e-34 | 3 |
tendon cell | 2.19e-34 | 3 |
GAG secreting cell | 6.38e-20 | 9 |
carbohydrate secreting cell | 6.38e-20 | 9 |
stromal cell | 7.09e-19 | 28 |
chondroblast | 3.31e-17 | 6 |
chondrocyte | 3.31e-17 | 6 |
extracellular matrix secreting cell | 4.58e-12 | 15 |
smooth muscle cell of trachea | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.19e-34 | 3 |
tendon | 2.19e-34 | 3 |
regular connective tissue | 2.19e-34 | 3 |
surface | 1.25e-12 | 1 |
mitral valve | 3.08e-12 | 1 |
extraembryonic membrane | 9.03e-08 | 14 |
membranous layer | 9.03e-08 | 14 |
chorion | 2.15e-07 | 7 |
atrioventricular valve | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.20e-12 | 1 |