FFCP PHASE1:Hg19::chr13:100927440..100927468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:100927440..100927468,+ | |||
|description=CAGE_peak_at_chr13:100927440..100927468,+ | |description=CAGE_peak_at_chr13:100927440..100927468,+ | ||
|id=chr13:100927440..100927468,+ | |id=chr13:100927440..100927468,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112;CL:0002032!2.08e-07!165;CL:0000837!2.08e-07!165;CL:0000037!6.00e-07!172;CL:0000566!6.00e-07!172;CL:0002127!9.67e-07!1;CL:0000914!9.67e-07!1;CL:0000911!9.67e-07!1;CL:0000814!9.67e-07!1;CL:0002042!9.67e-07!1;CL:0002039!9.67e-07!1;CL:0002040!9.67e-07!1;CL:0002041!9.67e-07!1 | |ontology_enrichment_celltype=CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112;CL:0002032!2.08e-07!165;CL:0000837!2.08e-07!165;CL:0000037!6.00e-07!172;CL:0000566!6.00e-07!172;CL:0002127!9.67e-07!1;CL:0000914!9.67e-07!1;CL:0000911!9.67e-07!1;CL:0000814!9.67e-07!1;CL:0002042!9.67e-07!1;CL:0002039!9.67e-07!1;CL:0002040!9.67e-07!1;CL:0002041!9.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.72e-14;1!CL:0000911;1.72e-14;1!CL:0000814;1.72e-14;1!CL:0000047;8.32e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.07e-16,108;CL:0000049,3.07e-16,108;CL:0002127,1.84e-14,1;CL:0000914,1.84e-14,1;CL:0000911,1.84e-14,1;CL:0000814,1.84e-14,1;CL:0002042,1.84e-14,1;CL:0002039,1.84e-14,1;CL:0002040,1.84e-14,1;CL:0002041,1.84e-14,1;CL:0002032,2.00e-12,161;CL:0000837,2.00e-12,161;CL:0000037,7.57e-12,168;CL:0000988,3.60e-11,177;CL:0000893,7.03e-08,2;CL:0002489,7.03e-08,2;CL:0000809,7.03e-08,2;CL:0000808,7.03e-08,2;CL:0000894,7.03e-08,2;CL:0000806,7.03e-08,2;CL:0000807,7.03e-08,2;CL:0000805,7.03e-08,2;CL:0002425,7.03e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;6.80e-08;2!CL:0000049;9.19e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!2.44e-45!39;DOID:8692!4.98e-41!31;DOID:2531!1.20e-33!51;DOID:0060083!1.20e-33!51;DOID:0050686!3.35e-15!137;DOID:162!2.04e-10!235;DOID:14566!4.43e-10!239;DOID:3093!5.79e-07!11;DOID:9119!9.15e-07!1 | |ontology_enrichment_disease=DOID:1240!2.44e-45!39;DOID:8692!4.98e-41!31;DOID:2531!1.20e-33!51;DOID:0060083!1.20e-33!51;DOID:0050686!3.35e-15!137;DOID:162!2.04e-10!235;DOID:14566!4.43e-10!239;DOID:3093!5.79e-07!11;DOID:9119!9.15e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.19e-59;31!DOID:1240;4.41e-47;39!DOID:2531;2.78e-29;51!DOID:0060083;2.78e-29;51!DOID:9119;1.72e-14;1!DOID:154;8.32e-08;2!DOID:4236;8.32e-08;2!DOID:0050686;8.59e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.31e-60,31;DOID:1240,6.16e-56,39;DOID:2531,1.70e-42,51;DOID:0060083,1.70e-42,51;DOID:0050686,7.58e-15,137;DOID:9119,1.61e-14,1;DOID:162,1.68e-09,235;DOID:14566,2.87e-09,239;DOID:154,7.52e-08,2;DOID:4236,7.52e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr13:100927440..100927468,+ | |short_description=p@chr13:100927440..100927468,+ | ||
}} | }} |
Latest revision as of 14:12, 24 July 2015
Short description: | p@chr13:100927440..100927468, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100927440..100927468, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.07e-16 | 108 |
common myeloid progenitor | 3.07e-16 | 108 |
innate effector T cell | 1.84e-14 | 1 |
immature NK T cell | 1.84e-14 | 1 |
effector T cell | 1.84e-14 | 1 |
mature NK T cell | 1.84e-14 | 1 |
immature NK T cell stage IV | 1.84e-14 | 1 |
immature NK T cell stage I | 1.84e-14 | 1 |
immature NK T cell stage II | 1.84e-14 | 1 |
immature NK T cell stage III | 1.84e-14 | 1 |
hematopoietic oligopotent progenitor cell | 2.00e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-12 | 161 |
hematopoietic stem cell | 7.57e-12 | 168 |
hematopoietic cell | 3.60e-11 | 177 |
thymocyte | 7.03e-08 | 2 |
double negative thymocyte | 7.03e-08 | 2 |
double-positive, alpha-beta thymocyte | 7.03e-08 | 2 |
DN4 thymocyte | 7.03e-08 | 2 |
DN1 thymic pro-T cell | 7.03e-08 | 2 |
DN2 thymocyte | 7.03e-08 | 2 |
DN3 thymocyte | 7.03e-08 | 2 |
immature single positive thymocyte | 7.03e-08 | 2 |
early T lineage precursor | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.31e-60 | 31 |
leukemia | 6.16e-56 | 39 |
hematologic cancer | 1.70e-42 | 51 |
immune system cancer | 1.70e-42 | 51 |
organ system cancer | 7.58e-15 | 137 |
acute myeloid leukemia | 1.61e-14 | 1 |
cancer | 1.68e-09 | 235 |
disease of cellular proliferation | 2.87e-09 | 239 |
mixed cell type cancer | 7.52e-08 | 2 |
carcinosarcoma | 7.52e-08 | 2 |