FFCP PHASE1:Hg19::chr19:43965910..43965925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:43965910..43965925,- | |||
|coexpression_cluster_id=C1454 | |||
|description=CAGE_peak_at_chr19:43965910..43965925,- | |description=CAGE_peak_at_chr19:43965910..43965925,- | ||
|id=chr19:43965910..43965925,- | |id=chr19:43965910..43965925,- | ||
|ontology_enrichment_celltype=CL:0000860!1.37e-11!45;CL:0002057!9.40e-10!42;CL:0002009!9.77e-09!65;CL:0002194!4.82e-08!63;CL:0000576!4.82e-08!63;CL:0000040!4.82e-08!63;CL:0000559!4.82e-08!63;CL:0000557!1.19e-07!71;CL:0002076!3.68e-07!43;CL:0000839!7.35e-07!70 | |ontology_enrichment_celltype=CL:0000860!1.37e-11!45;CL:0002057!9.40e-10!42;CL:0002009!9.77e-09!65;CL:0002194!4.82e-08!63;CL:0000576!4.82e-08!63;CL:0000040!4.82e-08!63;CL:0000559!4.82e-08!63;CL:0000557!1.19e-07!71;CL:0002076!3.68e-07!43;CL:0000839!7.35e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.20e-24;33!CL:0002057;3.20e-24;33!CL:0000473;7.21e-16;39!CL:0000234;7.21e-16;39!CL:0000576;2.34e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-20,42;CL:0002057,1.08e-20,42;CL:0000473,4.97e-18,48;CL:0000234,4.97e-18,48;CL:0002194,2.70e-14,59;CL:0000576,2.70e-14,59;CL:0000040,2.70e-14,59;CL:0000559,2.70e-14,59;CL:0002009,8.21e-14,61;CL:0000839,9.90e-13,66;CL:0000557,1.56e-12,67;CL:0000766,1.26e-11,72;CL:0000763,1.53e-07,108;CL:0000049,1.53e-07,108;CL:0002087,4.86e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.45e-16;1!UBERON:0000358;1.15e-15;1!CL:0002057;1.68e-13;42!UBERON:0008814;1.20e-08;2!UBERON:0010056;1.20e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!5.15e-08!72;UBERON:0001557!1.78e-07!19;UBERON:0000166!4.42e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.15e-15;1!UBERON:0000341;1.39e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.99e-16,1;UBERON:0002371,5.49e-11,76;UBERON:0001474,3.86e-10,82;UBERON:0004765,3.49e-09,90;UBERON:0002405,7.23e-09,93;UBERON:0000341,1.29e-08,2;UBERON:0002390,2.21e-08,98;UBERON:0003061,2.21e-08,98;UBERON:0001434,3.36e-08,100;UBERON:0002193,1.53e-07,108 | |||
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| ||
|short_description=p@chr19:43965910..43965925,- | |short_description=p@chr19:43965910..43965925,- | ||
}} | }} |
Latest revision as of 14:26, 27 July 2015
Short description: | p@chr19:43965910..43965925, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:43965910..43965925, - |
Coexpression cluster: | C1454_tongue_esophagus_CD14_throat_skin_amniotic_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.08e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-20 | 42 |
defensive cell | 4.97e-18 | 48 |
phagocyte | 4.97e-18 | 48 |
monopoietic cell | 2.70e-14 | 59 |
monocyte | 2.70e-14 | 59 |
monoblast | 2.70e-14 | 59 |
promonocyte | 2.70e-14 | 59 |
macrophage dendritic cell progenitor | 8.21e-14 | 61 |
myeloid lineage restricted progenitor cell | 9.90e-13 | 66 |
granulocyte monocyte progenitor cell | 1.56e-12 | 67 |
myeloid leukocyte | 1.26e-11 | 72 |
myeloid cell | 1.53e-07 | 108 |
common myeloid progenitor | 1.53e-07 | 108 |
nongranular leukocyte | 4.86e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
surface | 9.99e-16 | 1 |
bone marrow | 5.49e-11 | 76 |
bone element | 3.86e-10 | 82 |
skeletal element | 3.49e-09 | 90 |
immune system | 7.23e-09 | 93 |
throat | 1.29e-08 | 2 |
hematopoietic system | 2.21e-08 | 98 |
blood island | 2.21e-08 | 98 |
skeletal system | 3.36e-08 | 100 |
hemolymphoid system | 1.53e-07 | 108 |