FFCP PHASE1:Hg19::chr14:32963539..32963552,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9472 | |EntrezGene=9472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=376 | |HGNC=376 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3H6 | |UniProt=G3V3H6 | ||
|association_with_transcript=62bp_to_ENST00000554410_5end | |association_with_transcript=62bp_to_ENST00000554410_5end | ||
|cluster_id=chr14:32963539..32963552,+ | |||
|coexpression_cluster_id=C1719 | |||
|description=CAGE_peak_11_at_AKAP6_5end | |description=CAGE_peak_11_at_AKAP6_5end | ||
|id=chr14:32963539..32963552,+ | |id=chr14:32963539..32963552,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.64e-23!23;CL:0000057!6.53e-11!75 | |ontology_enrichment_celltype=CL:0002620!2.64e-23!23;CL:0000057!6.53e-11!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.39e-27;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.57e-27,23;CL:0000057,2.43e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.06e-26;1 | |||
|ontology_enrichment_disease=DOID:17!3.02e-09!5;DOID:450!3.02e-09!5;DOID:66!3.02e-09!5;DOID:423!3.02e-09!5;DOID:0080000!3.02e-09!5;DOID:11722!3.02e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.78e-26;1!DOID:4549;2.78e-26;1!DOID:5861;2.78e-26;1!DOID:6496;2.78e-26;1!DOID:1909;6.43e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.78e-26,1;DOID:4549,2.78e-26,1;DOID:5861,2.78e-26,1;DOID:6496,2.78e-26,1;DOID:1909,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.91e-15!40;UBERON:0002199!5.26e-13!45;UBERON:0002416!5.26e-13!45;UBERON:0007023!1.64e-08!115;UBERON:0006331!6.33e-07!3;UBERON:0003102!8.60e-07!95 | |ontology_enrichment_uberon=UBERON:0002097!5.91e-15!40;UBERON:0002199!5.26e-13!45;UBERON:0002416!5.26e-13!45;UBERON:0007023!1.64e-08!115;UBERON:0006331!6.33e-07!3;UBERON:0003102!8.60e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.13e-16;41!UBERON:0003102;3.58e-10;50!UBERON:0002199;7.52e-10;46!UBERON:0002416;7.52e-10;46!UBERON:0002418;1.10e-09;3!UBERON:0004755;1.10e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.32e-22,41;UBERON:0002199,2.04e-19,46;UBERON:0002416,2.04e-19,46;UBERON:0002418,1.10e-09,3;UBERON:0004755,1.10e-09,3;UBERON:0003102,4.37e-09,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,1.61450672119976,0.85422955527427,0,0,0.309157587715317,1.28820270022815,0.930584281657949,0.675105328965065,0.974370051611986,1.00973509697646,0.460249493211497,0,2.13005755509969,1.0075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,5.20711147479852,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82421028937415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,1.61450672119976,0.85422955527427,0,0,0.309157587715317,1.28820270022815,0.930584281657949,0.675105328965065,0.974370051611986,1.00973509697646,0.460249493211497,0,2.13005755509969,1.0075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,5.20711147479852,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82421028937415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p11@AKAP6 | |short_description=p11@AKAP6 | ||
}} | }} |
Latest revision as of 17:47, 19 September 2015
Short description: | p11@AKAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_AKAP6_5end |
Coexpression cluster: | C1719_melanoma_extraskeletal_Fibroblast_rhabdomyosarcoma_mesodermal_skeletal_normal |
Association with transcript: | 62bp_to_ENST00000554410_5end |
EntrezGene: | AKAP6 |
HGNC: | 376 |
UniProt: | G3V3H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.57e-27 | 23 |
fibroblast | 2.43e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.32e-22 | 41 |
integument | 2.04e-19 | 46 |
integumental system | 2.04e-19 | 46 |
cartilage tissue | 1.10e-09 | 3 |
skeletal tissue | 1.10e-09 | 3 |
surface structure | 4.37e-09 | 99 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.78e-26 | 1 |
extraosseous chondrosarcoma | 2.78e-26 | 1 |
myxoid chondrosarcoma | 2.78e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.78e-26 | 1 |
melanoma | 6.43e-14 | 2 |