FFCP PHASE1:Hg19::chr14:38064429..38064486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |EntrezGene=3169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |HGNC=5021 | ||
|TSSclassifier=strong | |||
|UniProt=P55317 | |UniProt=P55317 | ||
|association_with_transcript=2bp_to_NM_004496,uc001wuf.2_5end | |association_with_transcript=2bp_to_NM_004496,uc001wuf.2_5end | ||
|cluster_id=chr14:38064429..38064486,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_1_at_FOXA1_5end | |description=CAGE_peak_1_at_FOXA1_5end | ||
|id=chr14:38064429..38064486,- | |id=chr14:38064429..38064486,- | ||
|ontology_enrichment_celltype=CL:0000066!9.37e-37!254;CL:0000223!6.19e-19!59;CL:0002076!5.65e-14!43;CL:0000082!6.21e-11!19;CL:0002368!2.85e-09!13;CL:0002202!5.21e-07!9;CL:0002632!5.21e-07!9 | |ontology_enrichment_celltype=CL:0000066!9.37e-37!254;CL:0000223!6.19e-19!59;CL:0002076!5.65e-14!43;CL:0000082!6.21e-11!19;CL:0002368!2.85e-09!13;CL:0002202!5.21e-07!9;CL:0002632!5.21e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.23e-11;42!CL:0000082;4.77e-11;19!CL:0002368;6.86e-11;13!CL:0002202;8.92e-08;9!CL:0002632;8.92e-08;9!CL:0000182;1.09e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.58e-42,253;CL:0000223,1.06e-20,58;CL:0002076,2.79e-14,42;CL:0000082,4.61e-11,19;CL:0002368,6.81e-11,13;CL:0002202,8.51e-08,9;CL:0002632,8.51e-08,9;CL:0000182,1.01e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.66e-17;29!UBERON:0001041;1.45e-16;30!UBERON:0006595;4.78e-14;86!CL:0000223;4.06e-11;58!UBERON:0009497;2.51e-08;13 | |||
|ontology_enrichment_disease=DOID:305!7.26e-43!106;DOID:0050687!8.12e-40!143;DOID:162!1.74e-28!235;DOID:14566!2.43e-27!239;DOID:299!1.06e-13!25;DOID:0050615!5.12e-09!16;DOID:1749!1.91e-08!14;DOID:1324!2.36e-08!15;DOID:7!1.15e-07!39 | |ontology_enrichment_disease=DOID:305!7.26e-43!106;DOID:0050687!8.12e-40!143;DOID:162!1.74e-28!235;DOID:14566!2.43e-27!239;DOID:299!1.06e-13!25;DOID:0050615!5.12e-09!16;DOID:1749!1.91e-08!14;DOID:1324!2.36e-08!15;DOID:7!1.15e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:305;7.05e-14;106!DOID:299;1.60e-13;25!DOID:1749;3.38e-11;14!DOID:0050615;1.40e-08;16!DOID:7;2.95e-08;39!DOID:0050687;5.78e-08;143!DOID:1324;9.83e-08;15!DOID:5093;9.66e-07;4!DOID:1612;9.66e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.99e-49,106;DOID:0050687,3.98e-36,143;DOID:162,7.11e-22,235;DOID:14566,8.57e-21,239;DOID:299,1.51e-13,25;DOID:1749,2.99e-11,14;DOID:7,8.37e-10,39;DOID:0050615,1.40e-08,16;DOID:1324,9.77e-08,15;DOID:5093,9.67e-07,4;DOID:1612,9.67e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.70e-33!169;UBERON:0000925!4.70e-33!169;UBERON:0006595!4.70e-33!169;UBERON:0004921!1.73e-32!129;UBERON:0004185!1.73e-32!129;UBERON:0001007!6.93e-30!155;UBERON:0001555!6.93e-30!155;UBERON:0007026!6.93e-30!155;UBERON:0000077!1.20e-26!130;UBERON:0005911!9.58e-23!82;UBERON:0001041!1.60e-22!98;UBERON:0000065!4.29e-19!53;UBERON:0005177!9.60e-19!107;UBERON:0008947!1.75e-18!38;UBERON:0003258!1.75e-18!38;UBERON:0001004!7.60e-16!72;UBERON:0000466!1.59e-15!126;UBERON:0009569!2.11e-15!113;UBERON:0000072!7.20e-15!46;UBERON:0005153!9.26e-15!37;UBERON:0005178!1.47e-13!34;UBERON:0002224!1.47e-13!34;UBERON:0002048!4.08e-13!22;UBERON:0000117!4.08e-13!22;UBERON:0000171!4.08e-13!22;UBERON:0000170!4.08e-13!22;UBERON:0005597!4.08e-13!22;UBERON:0000118!4.08e-13!22;UBERON:0005181!7.54e-13!35;UBERON:0003104!2.34e-11!238;UBERON:0009142!2.34e-11!238;UBERON:0004802!6.21e-11!19;UBERON:0000115!6.21e-11!19;UBERON:0000464!1.60e-10!104;UBERON:0000915!1.79e-10!52;UBERON:0005157!2.70e-10!51;UBERON:0003929!2.64e-09!54;UBERON:0001008!1.61e-08!45;UBERON:0009856!1.94e-08!26;UBERON:0009497!2.66e-08!25;UBERON:0000015!2.66e-08!25;UBERON:0002423!2.66e-08!25;UBERON:0006235!2.66e-08!25;UBERON:0004161!2.66e-08!25;UBERON:0005172!4.72e-08!55;UBERON:0005173!4.72e-08!55;UBERON:0006554!5.23e-08!44;UBERON:0001048!5.72e-08!168;UBERON:0007499!6.20e-08!25;UBERON:0000344!9.93e-08!12;UBERON:0001046!1.61e-07!19;UBERON:0004807!3.70e-07!28;UBERON:0005409!3.99e-07!35;UBERON:0009854!4.45e-07!23;UBERON:0003064!5.89e-07!37;UBERON:0002100!9.65e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.45e-16;44!UBERON:0000072;8.75e-15;37!UBERON:0005178;4.59e-14;34!UBERON:0002224;4.59e-14;34!UBERON:0002048;7.01e-14;22!UBERON:0000117;7.01e-14;22!UBERON:0000171;7.01e-14;22!UBERON:0000170;7.01e-14;22!UBERON:0005181;2.43e-13;35!UBERON:0004802;4.77e-11;19!UBERON:0000115;4.77e-11;19!UBERON:0002423;5.52e-11;25!UBERON:0005911;7.88e-10;36!UBERON:0001004;7.95e-10;65!UBERON:0004921;8.57e-10;33!UBERON:0005409;2.68e-09;22!UBERON:0000915;6.45e-09;52!UBERON:0004807;6.50e-09;22!UBERON:0005177;2.19e-08;99!UBERON:0006554;1.65e-07;30!UBERON:0001008;1.65e-07;30!UBERON:0000160;4.21e-07;17!UBERON:0001007;7.71e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,8.06e-41,118;UBERON:0004119,5.25e-39,160;UBERON:0000925,5.25e-39,160;UBERON:0006595,5.25e-39,160;UBERON:0001007,4.99e-36,145;UBERON:0001555,4.99e-36,145;UBERON:0007026,4.99e-36,145;UBERON:0001041,1.14e-28,87;UBERON:0005911,5.53e-23,82;UBERON:0005177,5.13e-22,101;UBERON:0008947,6.78e-22,38;UBERON:0003258,6.78e-22,38;UBERON:0000065,8.02e-22,54;UBERON:0009569,7.99e-20,112;UBERON:0001004,9.95e-19,74;UBERON:0000072,2.49e-16,47;UBERON:0005178,4.81e-16,34;UBERON:0002224,4.81e-16,34;UBERON:0005181,2.44e-15,35;UBERON:0005153,6.81e-15,37;UBERON:0002048,6.56e-14,22;UBERON:0000117,6.56e-14,22;UBERON:0000171,6.56e-14,22;UBERON:0000170,6.56e-14,22;UBERON:0005597,6.56e-14,22;UBERON:0000118,6.56e-14,22;UBERON:0000915,1.92e-13,52;UBERON:0011216,3.41e-12,223;UBERON:0002100,1.35e-11,199;UBERON:0004802,4.61e-11,19;UBERON:0000115,4.61e-11,19;UBERON:0009497,5.06e-11,25;UBERON:0000015,5.06e-11,25;UBERON:0002423,5.06e-11,25;UBERON:0006235,5.06e-11,25;UBERON:0004161,5.06e-11,25;UBERON:0009856,2.38e-10,26;UBERON:0005157,5.87e-10,47;UBERON:0007499,1.13e-09,25;UBERON:0005172,2.25e-09,54;UBERON:0005173,2.25e-09,54;UBERON:0009854,2.45e-09,23;UBERON:0003929,4.88e-09,54;UBERON:0008835,1.17e-08,22;UBERON:0003894,1.17e-08,22;UBERON:0001046,1.70e-08,19;UBERON:0001008,1.96e-08,48;UBERON:0006554,7.93e-08,47;UBERON:0005409,1.07e-07,25;UBERON:0002417,1.22e-07,60;UBERON:0000916,1.22e-07,60;UBERON:0000160,4.12e-07,17 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,11.5494950155709,23.7252397110625,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,11.9524759182261,7.8313538882345,13.3111443660044,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,7.1314904155684,5.50236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,6.97750483428055,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0,1.04574548582567,0.725627385107593,0,0.36497735907583,0,0,0,0,0,3.43089720115547,1.01150814046861,4.09718750801919,2.86764329104224,1.30727666455444,3.08451804844426,2.69662616320329,2.15843611637881,1.53898862778556,0,2.80483547606892,0.8231480226628,0,51.9695642769506,39.313088667105,51.3987218812822,0,65.7988146205658,0,0,0,0,0.0925884451585296,0,0,4.3299402607582,0,0.469634776943287,0,0,0,420.388739714334,383.743314456408,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0.88369703398466,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,1.8403723757871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.8272176350154,18.2460887975989,11.9705285616665,0,0,0.262248829918848,6.31679458070376,3.31165949548983,2.35304930753057,1.46139224653261,2.11103257785751,0,1.19065593693561,0,0,0,0,1.27438136522519,0.831076008928724,4.70136984916574,0,0,0,0,0,14.4257416306811,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,4.79326254546837,8.07198282933446,6.25302291223462,9.00304249614394,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,7.89021324349199,14.0763477862515,16.3336477291984,14.1215701165169,18.0812256521917,6.73885902670502,13.3029046061003,8.04031900724358,0,0,0,0,0,0,0,0,0,0,24.7490618140842,0,0,0,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,1.4452926759333,0.403599414382095,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0.270455678475983,0,0,9.91844864163565,0,8.49523652246594,0,0.284136146806413,0,0.593929361665277,0,0,0,1.44701316529778,0,2.95575571379191,8.567663494796,6.90709788827869,3.02319297425131,0,0,0,5.93131117572357,29.7175149961511,0,6.70775158331149,0,0,0,0,0,239.072684676244,348.790479984828,26.0999847156526,21.7345486225304,16.0179799684443,0.945550727071745,0,0.291604613383254,7.29224978719828,0,0,0,0,0,0,0.544692317594951,7.38945844676597,1.69290568708354,0,0,0.0897576444097721,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.569261198172555,0,2.95397290339238,3.10142335502381,52.0179302876902,0.865554558968364,24.8815482769626,10.437992611394,21.3860550726769,7.70954934569617,1.60633120630454,1.35748534357092,0.067401132980677,0,0,0,12.5225356116537,0.485560759068186,0,7.25944296291983,0,0.063186579628488,7.9671412289681,14.8274113698063,0.664653872707185,0.661983911750998,0,0,3.13070500632772,0,15.967495926832,28.6137800449983,5.83296684088697,0.52418000472609,0.171986032471617,1.9351266257817,2.55812609801649,1.8065400551706,8.14707738502723,0.441280633457501,1.58186518546373,0.685209623233754,0,0,31.0926698548337,9.37858196942944,6.40358984218058,0.799238438328521,1.29681375438695,20.2729775213671,7.89336990165037,2.44893156579854,17.7681125858569,15.3201122500917,0.135904206073614,0.418411385249333,7.0378770169062,0,0,0,0,0,0,0,0.229160424011684,0,21.1659740528931,0,0,0.0671834724867263,0,6.98975697164723,49.8697544004726,54.0648030980452,49.4742011889717,20.374488673553,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0.242998226632099,5.70238968918752,0.315222829196793,1.04909176269996,48.2593537893688,10.398665681305,1.72723677587501,0,0,0,0,0,0,0,0,0.170388021785422,2.15292973888239,42.646700000322,14.5757577803443,0,0,7.35673402902616,15.5059304909668,10.8923160819049,22.0086027139532,21.9546699334014,0,0,0,7.021753835472,0,0,0,0,12.4072736037685,0.886068179966986,0,0,0,0,0.18628920882415,2.49027542885215,0,0.303298235083296,0,1.88212655758537,0,9.85462994553611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,5.57548137574807,3.65392008751296,0.453411851024545,3.47283711485751,0.734210113519403,2.14906609297785,2.47041157728778,3.28926074368061,1.23682402162117,0,0.168942440653073,2.81865670446741,0.345430341731199,0.911579868532147,0,0.194860308839388,0.531459361253452,0,0.655219697692825,3.44082072255207,7.8185485642692,0,0.533458648470704,0,1.70254786070051,0,4.75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| ||
|short_description=p1@FOXA1 | |short_description=p1@FOXA1 | ||
}} | }} |
Latest revision as of 23:24, 19 September 2015
Short description: | p1@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXA1_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 2bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.58e-42 | 253 |
endodermal cell | 1.06e-20 | 58 |
endo-epithelial cell | 2.79e-14 | 42 |
epithelial cell of lung | 4.61e-11 | 19 |
respiratory epithelial cell | 6.81e-11 | 13 |
epithelial cell of tracheobronchial tree | 8.51e-08 | 9 |
epithelial cell of lower respiratory tract | 8.51e-08 | 9 |
hepatocyte | 1.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.99e-49 | 106 |
cell type cancer | 3.98e-36 | 143 |
cancer | 7.11e-22 | 235 |
disease of cellular proliferation | 8.57e-21 | 239 |
adenocarcinoma | 1.51e-13 | 25 |
squamous cell carcinoma | 2.99e-11 | 14 |
disease of anatomical entity | 8.37e-10 | 39 |
respiratory system cancer | 1.40e-08 | 16 |
lung cancer | 9.77e-08 | 15 |
thoracic cancer | 9.67e-07 | 4 |
breast cancer | 9.67e-07 | 4 |