FFCP PHASE1:Hg19::chr19:54377395..54377415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=399bp_to_AK027693_5end | |association_with_transcript=399bp_to_AK027693_5end | ||
|cluster_id=chr19:54377395..54377415,+ | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_15_at_MYADM_5end | |description=CAGE_peak_15_at_MYADM_5end | ||
|id=chr19:54377395..54377415,+ | |id=chr19:54377395..54377415,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.84e-12!42;CL:0000048!3.49e-11!430;CL:0000860!1.03e-10!45;CL:0000723!3.24e-10!436;CL:0000034!4.34e-09!444;CL:0000144!4.49e-09!625;CL:0002371!2.30e-08!591;CL:0000134!2.41e-08!358;CL:0002320!2.59e-08!365;CL:0000766!9.72e-08!76;CL:0000057!2.54e-07!75;CL:0000557!3.94e-07!71;CL:0000548!4.77e-07!679;CL:0000004!4.77e-07!679;CL:0000255!4.77e-07!679 | |ontology_enrichment_celltype=CL:0002057!1.84e-12!42;CL:0000048!3.49e-11!430;CL:0000860!1.03e-10!45;CL:0000723!3.24e-10!436;CL:0000034!4.34e-09!444;CL:0000144!4.49e-09!625;CL:0002371!2.30e-08!591;CL:0000134!2.41e-08!358;CL:0002320!2.59e-08!365;CL:0000766!9.72e-08!76;CL:0000057!2.54e-07!75;CL:0000557!3.94e-07!71;CL:0000548!4.77e-07!679;CL:0000004!4.77e-07!679;CL:0000255!4.77e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-17;33!CL:0002057;2.87e-17;33!CL:0000473;1.42e-12;39!CL:0000234;1.42e-12;39!CL:0000576;8.01e-09;48!CL:0000766;1.76e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-16,42;CL:0002057,1.04e-16,42;CL:0000048,1.82e-16,427;CL:0000723,1.36e-15,433;CL:0000473,2.08e-15,48;CL:0000234,2.08e-15,48;CL:0000034,1.77e-14,441;CL:0000134,1.42e-12,354;CL:0002320,5.00e-12,361;CL:0000766,8.61e-12,72;CL:0000557,2.23e-11,67;CL:0000839,5.64e-11,66;CL:0002009,4.62e-10,61;CL:0002194,5.23e-10,59;CL:0000576,5.23e-10,59;CL:0000040,5.23e-10,59;CL:0000559,5.23e-10,59;CL:0000219,1.17e-09,386;CL:0000192,2.50e-07,43;CL:0000514,2.50e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;3.36e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.21e-14!216;UBERON:0000926!9.43e-13!448;UBERON:0004120!9.43e-13!448;UBERON:0006603!9.43e-13!448;UBERON:0002204!1.29e-10!167;UBERON:0002384!1.80e-08!375;UBERON:0003914!1.04e-07!118;UBERON:0002371!2.13e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.09e-19,315;UBERON:0004120,7.09e-19,315;UBERON:0006603,7.09e-19,315;UBERON:0003081,2.66e-16,203;UBERON:0002384,6.52e-12,371;UBERON:0002204,8.86e-12,167;UBERON:0002371,5.00e-11,76;UBERON:0001474,4.76e-10,82;UBERON:0002405,1.68e-08,93;UBERON:0002390,4.64e-08,98;UBERON:0003061,4.64e-08,98;UBERON:0004765,4.74e-08,90;UBERON:0002193,1.08e-07,108;UBERON:0001434,2.19e-07,100;UBERON:0001637,5.14e-07,42;UBERON:0003509,5.14e-07,42;UBERON:0004572,5.14e-07,42 | |||
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| ||
|short_description=p15@MYADM | |short_description=p15@MYADM | ||
}} | }} |
Latest revision as of 20:13, 19 September 2015
Short description: | p15@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | 399bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-16 | 42 |
multi fate stem cell | 1.82e-16 | 427 |
somatic stem cell | 1.36e-15 | 433 |
defensive cell | 2.08e-15 | 48 |
phagocyte | 2.08e-15 | 48 |
stem cell | 1.77e-14 | 441 |
mesenchymal cell | 1.42e-12 | 354 |
connective tissue cell | 5.00e-12 | 361 |
myeloid leukocyte | 8.61e-12 | 72 |
granulocyte monocyte progenitor cell | 2.23e-11 | 67 |
myeloid lineage restricted progenitor cell | 5.64e-11 | 66 |
macrophage dendritic cell progenitor | 4.62e-10 | 61 |
monopoietic cell | 5.23e-10 | 59 |
monocyte | 5.23e-10 | 59 |
monoblast | 5.23e-10 | 59 |
promonocyte | 5.23e-10 | 59 |
motile cell | 1.17e-09 | 386 |
smooth muscle cell | 2.50e-07 | 43 |
smooth muscle myoblast | 2.50e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.09e-19 | 315 |
mesoderm-derived structure | 7.09e-19 | 315 |
presumptive mesoderm | 7.09e-19 | 315 |
lateral plate mesoderm | 2.66e-16 | 203 |
connective tissue | 6.52e-12 | 371 |
musculoskeletal system | 8.86e-12 | 167 |
bone marrow | 5.00e-11 | 76 |
bone element | 4.76e-10 | 82 |
immune system | 1.68e-08 | 93 |
hematopoietic system | 4.64e-08 | 98 |
blood island | 4.64e-08 | 98 |
skeletal element | 4.74e-08 | 90 |
hemolymphoid system | 1.08e-07 | 108 |
skeletal system | 2.19e-07 | 100 |
artery | 5.14e-07 | 42 |
arterial blood vessel | 5.14e-07 | 42 |
arterial system | 5.14e-07 | 42 |