FFCP PHASE1:Hg19::chr11:2017331..2017342,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2017331..2017342,-
|short_description=p30@H19
|description=CAGE_peak_30_at_H19_5end
|association_with_transcript=78bp_to_ENST00000442037_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_ENST00000442037_5end | |||
|cluster_id=chr11:2017331..2017342,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_30_at_H19_5end | |||
|id=chr11:2017331..2017342,- | |||
|ontology_enrichment_celltype=CL:0000188!8.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.43e-25;19!CL:0002577;6.83e-12;3!CL:0002541;1.29e-11;3!CL:0002536;2.87e-08;2!CL:0002575;3.61e-08;2!CL:0002537;2.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.52e-25,19;CL:0002577,6.60e-12,3;CL:0002541,1.49e-11,3;CL:0002536,2.72e-08,2;CL:0002575,3.74e-08,2;CL:0002537,2.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.55e-16!14;UBERON:0000158!1.55e-16!14;UBERON:0001737!6.35e-14!9;UBERON:0003124!3.57e-12!7;UBERON:0001557!1.45e-11!19;UBERON:0000478!1.59e-11!24;UBERON:0004923!3.90e-10!57;UBERON:0003104!7.44e-09!238;UBERON:0009142!7.44e-09!238;UBERON:0000077!2.69e-08!130;UBERON:0003688!3.84e-08!6;UBERON:0002358!3.84e-08!6;UBERON:0003684!3.84e-08!6;UBERON:0001178!3.84e-08!6;UBERON:0001041!6.69e-08!98;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0004119!1.35e-07!169;UBERON:0000925!1.35e-07!169;UBERON:0006595!1.35e-07!169;UBERON:0004921!2.10e-07!129;UBERON:0004185!2.10e-07!129;UBERON:0002100!6.05e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.04e-26;24!UBERON:0001737;7.62e-23;9!UBERON:0001557;7.62e-23;9!UBERON:0005631;1.59e-22;10!UBERON:0000158;1.59e-22;10!UBERON:0001987;1.20e-14;4!UBERON:0000305;3.22e-13;7!UBERON:0003124;1.29e-11;3!UBERON:0000920;1.29e-11;3!UBERON:0005406;3.67e-08;2!UBERON:0000341;2.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.26e-35,14;UBERON:0000158,3.26e-35,14;UBERON:0000478,9.33e-27,24;UBERON:0003124,1.36e-24,7;UBERON:0001737,8.48e-23,9;UBERON:0001557,4.88e-16,19;UBERON:0001987,8.78e-15,4;UBERON:0004340,8.78e-15,4;UBERON:0000305,3.19e-13,7;UBERON:0000920,1.49e-11,3;UBERON:0004871,1.61e-11,8;UBERON:0005406,3.61e-08,2;UBERON:0004923,2.12e-07,66;UBERON:0000341,3.40e-07,2 | |||
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| ||
|short_description=p30@H19 | |||
}} | }} |
Latest revision as of 06:22, 17 September 2015
Short description: | p30@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 78bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.52e-25 | 19 |
placental epithelial cell | 6.60e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.49e-11 | 3 |
amniotic epithelial cell | 2.72e-08 | 2 |
central nervous system pericyte | 3.74e-08 | 2 |
amnion mesenchymal stem cell | 2.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.26e-35 | 14 |
membranous layer | 3.26e-35 | 14 |
extraembryonic structure | 9.33e-27 | 24 |
chorion | 1.36e-24 | 7 |
larynx | 8.48e-23 | 9 |
upper respiratory tract | 4.88e-16 | 19 |
placenta | 8.78e-15 | 4 |
allantois | 8.78e-15 | 4 |
amnion | 3.19e-13 | 7 |
egg chorion | 1.49e-11 | 3 |
somatic layer of lateral plate mesoderm | 1.61e-11 | 8 |
perirenal fat | 3.61e-08 | 2 |
organ component layer | 2.12e-07 | 66 |
throat | 3.40e-07 | 2 |