FFCP PHASE1:Hg19::chr15:41522949..41522961,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161829 | |EntrezGene=161829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28507 | |HGNC=28507 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000558396_5end | |association_with_transcript=-8bp_to_ENST00000558396_5end | ||
|cluster_id=chr15:41522949..41522961,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_EXD1_5end | |description=CAGE_peak_1_at_EXD1_5end | ||
|id=chr15:41522949..41522961,- | |id=chr15:41522949..41522961,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;2.74e-12;2!CL:0002592;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0002592,1.21e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.14e-09!57;UBERON:0005068!4.14e-09!57;UBERON:0006241!4.14e-09!57;UBERON:0007135!4.14e-09!57;UBERON:0000955!9.74e-08!69;UBERON:0006238!9.74e-08!69;UBERON:0001017!1.07e-07!82;UBERON:0005743!5.07e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.74e-12;2!UBERON:0002702;2.74e-12;2!UBERON:0001875;2.74e-12;2!UBERON:0003566;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0006514;2.74e-12;2!UBERON:0010225;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0001896;1.26e-08;3!UBERON:0001870;1.26e-08;3!UBERON:0003498;1.26e-08;3!UBERON:0005985;1.26e-08;3!UBERON:0001621;1.26e-08;3!UBERON:0005290;1.26e-08;3!UBERON:0003891;8.85e-07;4!UBERON:0002784;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.07e-12,2;UBERON:0001897,2.32e-12,2;UBERON:0010225,2.32e-12,2;UBERON:0001875,2.90e-12,2;UBERON:0006514,2.90e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0003135,4.08e-09,11;UBERON:0001870,1.04e-08,3;UBERON:0001621,1.21e-08,3;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0007023,5.91e-07,114;UBERON:0000073,6.94e-07,53;UBERON:0002616,6.94e-07,53;UBERON:0002784,8.14e-07,4;UBERON:0003075,9.43e-07,82;UBERON:0007284,9.43e-07,82 | |||
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| ||
|short_description=p1@EXD1 | |short_description=p1@EXD1 | ||
}} | }} |
Latest revision as of 14:17, 17 September 2015
Short description: | p1@EXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EXD1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -8bp_to_ENST00000558396_5end |
EntrezGene: | EXD1 |
HGNC: | 28507 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
smooth muscle cell of the coronary artery | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.07e-12 | 2 |
dorsal plus ventral thalamus | 2.32e-12 | 2 |
thalamic complex | 2.32e-12 | 2 |
globus pallidus | 2.90e-12 | 2 |
pallidum | 2.90e-12 | 2 |
testis | 3.54e-12 | 8 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
male reproductive organ | 4.08e-09 | 11 |
frontal cortex | 1.04e-08 | 3 |
coronary artery | 1.21e-08 | 3 |
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
adult organism | 5.91e-07 | 114 |
regional part of nervous system | 6.94e-07 | 53 |
regional part of brain | 6.94e-07 | 53 |
regional part of diencephalon | 8.14e-07 | 4 |
neural plate | 9.43e-07 | 82 |
presumptive neural plate | 9.43e-07 | 82 |