FFCP PHASE1:Hg19::chr11:407103..407195,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:407103..407195,-
|short_description=p1@SIGIRR
|description=CAGE_peak_1_at_SIGIRR_5end
|association_with_transcript=0bp_to_ENST00000526395,ENST00000527987,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59307 | |EntrezGene=59307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30575 | |HGNC=30575 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526395,ENST00000527987,ENST00000534145_5end | |||
|cluster_id=chr11:407103..407195,- | |||
|description=CAGE_peak_1_at_SIGIRR_5end | |||
|id=chr11:407103..407195,- | |||
|ontology_enrichment_celltype=CL:0000222!1.32e-24!119;CL:0000055!4.64e-21!180;CL:0000183!1.43e-16!59;CL:0002078!6.64e-15!44;CL:0000115!1.02e-14!35;CL:0000393!3.87e-14!60;CL:0000211!3.87e-14!60;CL:0000187!6.80e-14!54;CL:0000680!1.98e-13!57;CL:0000056!1.98e-13!57;CL:0000355!1.98e-13!57;CL:0000192!3.19e-12!42;CL:0000514!3.19e-12!42;CL:0000213!6.30e-12!57;CL:0000215!6.30e-12!57;CL:0002139!1.57e-11!24;CL:0000359!2.64e-11!32;CL:0000071!2.35e-09!18;CL:0002546!2.35e-09!18;CL:0000048!2.74e-08!430;CL:0002371!2.89e-08!591;CL:1000449!2.00e-07!16;CL:0000057!2.19e-07!75;CL:0000723!3.17e-07!436;CL:1000497!3.71e-07!18;CL:0002518!3.71e-07!18;CL:0000220!3.87e-07!246;CL:0002321!5.01e-07!248;CL:0000034!6.35e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.12e-13;36!CL:0002139;1.53e-11;24!CL:0000359;9.35e-11;32!CL:0002078;1.16e-10;45!CL:0000071;2.25e-09;18!CL:0000192;3.84e-09;43!CL:0000393;5.90e-08;61!CL:0000211;5.90e-08;61!CL:0000187;1.08e-07;55!CL:0000213;1.69e-07;58!CL:0000215;1.69e-07;58!CL:1000449;2.52e-07;15!CL:1000497;4.91e-07;17!CL:0002518;4.91e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.51e-25,121;CL:0002078,1.95e-15,45;CL:0000115,2.90e-15,36;CL:0000393,2.55e-14,61;CL:0000211,2.55e-14,61;CL:0000187,4.53e-14,55;CL:0000680,1.31e-13,58;CL:0000056,1.31e-13,58;CL:0000355,1.31e-13,58;CL:0000213,2.17e-12,58;CL:0000215,2.17e-12,58;CL:0000192,2.17e-12,43;CL:0000514,2.17e-12,43;CL:0002139,1.56e-11,24;CL:0000359,2.62e-11,32;CL:0000071,2.33e-09,18;CL:0002546,2.33e-09,18;CL:0000048,2.00e-08,427;CL:0002321,2.08e-07,250;CL:0000723,2.45e-07,433;CL:1000449,2.62e-07,15;CL:0000057,3.04e-07,76;CL:0000034,4.96e-07,441;CL:1000497,5.09e-07,17;CL:0002518,5.09e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.25e-09;18!CL:0000514;3.84e-09;43!CL:0000222;8.65e-08;121!CL:0000355;1.57e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.63e-24!118;UBERON:0002049!2.08e-24!79;UBERON:0007798!2.08e-24!79;UBERON:0004535!2.88e-22!110;UBERON:0000055!3.02e-22!69;UBERON:0001009!3.22e-22!113;UBERON:0001981!1.16e-18!60;UBERON:0007500!1.16e-18!60;UBERON:0004537!1.16e-18!60;UBERON:0006965!1.16e-18!60;UBERON:0004872!3.68e-18!84;UBERON:0001637!2.12e-16!42;UBERON:0003509!2.12e-16!42;UBERON:0004572!2.12e-16!42;UBERON:0000025!5.98e-15!194;UBERON:0000477!1.87e-13!286;UBERON:0004573!1.06e-12!33;UBERON:0004571!1.06e-12!33;UBERON:0004290!1.52e-12!70;UBERON:0001134!3.58e-12!61;UBERON:0002036!3.58e-12!61;UBERON:0003082!3.58e-12!61;UBERON:0002385!6.92e-12!63;UBERON:0001015!6.92e-12!63;UBERON:0000383!6.92e-12!63;UBERON:0005256!1.02e-10!143;UBERON:0000914!1.30e-10!83;UBERON:0002329!1.30e-10!83;UBERON:0003077!1.30e-10!83;UBERON:0003059!1.30e-10!83;UBERON:0007282!1.30e-10!83;UBERON:0009618!1.30e-10!83;UBERON:0007285!1.30e-10!83;UBERON:0004111!1.66e-10!241;UBERON:0003081!1.01e-09!216;UBERON:0001986!2.35e-09!18;UBERON:0004638!2.35e-09!18;UBERON:0004852!2.35e-09!18;UBERON:0000490!4.40e-09!138;UBERON:0006914!9.27e-09!25;UBERON:0000119!1.29e-08!312;UBERON:0000483!1.69e-08!309;UBERON:0000486!1.77e-08!82;UBERON:0000487!7.09e-08!22;UBERON:0003103!1.72e-07!69;UBERON:0004211!2.00e-07!16;UBERON:0001285!2.00e-07!16;UBERON:0007684!2.00e-07!16;UBERON:0003220!2.00e-07!16;UBERON:0004208!2.00e-07!16;UBERON:0000947!3.47e-07!21;UBERON:0010191!3.47e-07!21;UBERON:0000926!3.67e-07!448;UBERON:0004120!3.67e-07!448;UBERON:0006603!3.67e-07!448;UBERON:0006555!6.86e-07!17;UBERON:0005103!6.86e-07!17;UBERON:0000083!6.86e-07!17;UBERON:0009201!6.86e-07!17;UBERON:0004819!6.86e-07!17;UBERON:0006553!6.86e-07!17;UBERON:0003074!6.86e-07!17;UBERON:0003060!6.86e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.63e-12;42!UBERON:0003509;3.63e-12;42!UBERON:0004572;3.63e-12;42!UBERON:0004573;1.30e-11;33!UBERON:0004571;1.30e-11;33!UBERON:0007500;2.51e-11;56!UBERON:0001981;2.51e-11;56!UBERON:0004537;2.51e-11;56!UBERON:0000055;3.16e-11;65!UBERON:0003914;5.83e-11;74!UBERON:0002049;7.51e-11;75!UBERON:0007798;7.51e-11;75!UBERON:0004638;2.25e-09;18!UBERON:0001986;2.25e-09;18!UBERON:0004852;2.25e-09;18!UBERON:0006914;1.04e-08;25!UBERON:0000487;8.05e-08;22!UBERON:0006555;2.52e-07;15!UBERON:0004819;2.52e-07;15!UBERON:0001285;2.52e-07;15!UBERON:0007684;2.52e-07;15!UBERON:0000947;3.46e-07;21!UBERON:0010191;3.46e-07;21!UBERON:0001009;8.58e-07;112 | |||
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| ||
|short_description=p1@SIGIRR | |||
}} | }} |
Latest revision as of 22:57, 17 September 2015
Short description: | p1@SIGIRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIGIRR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526395, ENST00000527987, ENST00000534145_5end |
EntrezGene: | SIGIRR |
HGNC: | 30575 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.51e-25 | 121 |
meso-epithelial cell | 1.95e-15 | 45 |
endothelial cell | 2.90e-15 | 36 |
electrically responsive cell | 2.55e-14 | 61 |
electrically active cell | 2.55e-14 | 61 |
muscle cell | 4.53e-14 | 55 |
muscle precursor cell | 1.31e-13 | 58 |
myoblast | 1.31e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-13 | 58 |
lining cell | 2.17e-12 | 58 |
barrier cell | 2.17e-12 | 58 |
smooth muscle cell | 2.17e-12 | 43 |
smooth muscle myoblast | 2.17e-12 | 43 |
endothelial cell of vascular tree | 1.56e-11 | 24 |
vascular associated smooth muscle cell | 2.62e-11 | 32 |
blood vessel endothelial cell | 2.33e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-09 | 18 |
multi fate stem cell | 2.00e-08 | 427 |
embryonic cell | 2.08e-07 | 250 |
somatic stem cell | 2.45e-07 | 433 |
epithelial cell of nephron | 2.62e-07 | 15 |
fibroblast | 3.04e-07 | 76 |
stem cell | 4.96e-07 | 441 |
kidney cell | 5.09e-07 | 17 |
kidney epithelial cell | 5.09e-07 | 17 |