FFCP PHASE1:Hg19::chr15:57025823..57025832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54816 | |EntrezGene=54816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25953 | |HGNC=25953 | ||
|TSSclassifier=strong | |||
|UniProt=Q6N043,Q7Z6J5 | |UniProt=Q6N043,Q7Z6J5 | ||
|association_with_transcript=-36bp_to_ENST00000267807,ENST00000455329,NM_001002843,NM_001002844,NM_017661,uc002adu.2,uc002adv.2,uc002ady.2,uc010bfq.2,uc010bfr.1_5end | |association_with_transcript=-36bp_to_ENST00000267807,ENST00000455329,NM_001002843,NM_001002844,NM_017661,uc002adu.2,uc002adv.2,uc002ady.2,uc010bfq.2,uc010bfr.1_5end | ||
|cluster_id=chr15:57025823..57025832,- | |||
|description=CAGE_peak_3_at_ZNF280D_5end | |description=CAGE_peak_3_at_ZNF280D_5end | ||
|id=chr15:57025823..57025832,- | |id=chr15:57025823..57025832,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.38e-18!115;UBERON:0001049!8.87e-15!57;UBERON:0005068!8.87e-15!57;UBERON:0006241!8.87e-15!57;UBERON:0007135!8.87e-15!57;UBERON:0002346!8.60e-14!90;UBERON:0003075!3.87e-13!86;UBERON:0007284!3.87e-13!86;UBERON:0002616!6.54e-13!59;UBERON:0000073!6.79e-13!94;UBERON:0001016!6.79e-13!94;UBERON:0005743!7.07e-12!86;UBERON:0001017!5.11e-11!82;UBERON:0002780!7.06e-11!41;UBERON:0001890!7.06e-11!41;UBERON:0006240!7.06e-11!41;UBERON:0000955!2.19e-10!69;UBERON:0006238!2.19e-10!69;UBERON:0003080!4.04e-10!42;UBERON:0003056!2.03e-08!61;UBERON:0002020!6.05e-08!34;UBERON:0003528!6.05e-08!34;UBERON:0001893!8.58e-08!34;UBERON:0002791!1.61e-07!33;UBERON:0001869!2.84e-07!32;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0000924!3.80e-07!173;UBERON:0006601!3.80e-07!173;UBERON:0000033!9.61e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!8.38e-18!115;UBERON:0001049!8.87e-15!57;UBERON:0005068!8.87e-15!57;UBERON:0006241!8.87e-15!57;UBERON:0007135!8.87e-15!57;UBERON:0002346!8.60e-14!90;UBERON:0003075!3.87e-13!86;UBERON:0007284!3.87e-13!86;UBERON:0002616!6.54e-13!59;UBERON:0000073!6.79e-13!94;UBERON:0001016!6.79e-13!94;UBERON:0005743!7.07e-12!86;UBERON:0001017!5.11e-11!82;UBERON:0002780!7.06e-11!41;UBERON:0001890!7.06e-11!41;UBERON:0006240!7.06e-11!41;UBERON:0000955!2.19e-10!69;UBERON:0006238!2.19e-10!69;UBERON:0003080!4.04e-10!42;UBERON:0003056!2.03e-08!61;UBERON:0002020!6.05e-08!34;UBERON:0003528!6.05e-08!34;UBERON:0001893!8.58e-08!34;UBERON:0002791!1.61e-07!33;UBERON:0001869!2.84e-07!32;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0000924!3.80e-07!173;UBERON:0006601!3.80e-07!173;UBERON:0000033!9.61e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.10e-08;53!UBERON:0002616;2.10e-08;53!UBERON:0002780;4.82e-07;41!UBERON:0001890;4.82e-07;41!UBERON:0004732;5.21e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.55e-17,56;UBERON:0005068,6.55e-17,56;UBERON:0006241,6.55e-17,56;UBERON:0007135,6.55e-17,56;UBERON:0000073,5.40e-15,53;UBERON:0002616,5.40e-15,53;UBERON:0007023,5.12e-12,114;UBERON:0002346,7.52e-12,86;UBERON:0001016,1.01e-11,89;UBERON:0003075,2.46e-11,82;UBERON:0007284,2.46e-11,82;UBERON:0001017,1.28e-10,81;UBERON:0000955,1.30e-10,68;UBERON:0006238,1.30e-10,68;UBERON:0002780,2.24e-10,41;UBERON:0001890,2.24e-10,41;UBERON:0003080,2.24e-10,41;UBERON:0006240,2.24e-10,41;UBERON:0003076,2.37e-08,15;UBERON:0003057,2.37e-08,15;UBERON:0010371,1.98e-07,104;UBERON:0003056,5.46e-07,61;UBERON:0004732,6.00e-07,13;UBERON:0003528,7.53e-07,34;UBERON:0002020,7.53e-07,34 | |||
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| ||
|short_description=p3@ZNF280D | |short_description=p3@ZNF280D | ||
}} | }} |
Latest revision as of 05:44, 18 September 2015
Short description: | p3@ZNF280D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF280D_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000267807, ENST00000455329, NM_001002843, NM_001002844, NM_017661, uc002adu.2, uc002adv.2, uc002ady.2, uc010bfq.2, uc010bfr.1_5end |
EntrezGene: | ZNF280D |
HGNC: | 25953 |
UniProt: | Q6N043Q7Z6J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.55e-17 | 56 |
neural rod | 6.55e-17 | 56 |
future spinal cord | 6.55e-17 | 56 |
neural keel | 6.55e-17 | 56 |
regional part of nervous system | 5.40e-15 | 53 |
regional part of brain | 5.40e-15 | 53 |
adult organism | 5.12e-12 | 114 |
neurectoderm | 7.52e-12 | 86 |
nervous system | 1.01e-11 | 89 |
neural plate | 2.46e-11 | 82 |
presumptive neural plate | 2.46e-11 | 82 |
central nervous system | 1.28e-10 | 81 |
brain | 1.30e-10 | 68 |
future brain | 1.30e-10 | 68 |
regional part of forebrain | 2.24e-10 | 41 |
forebrain | 2.24e-10 | 41 |
anterior neural tube | 2.24e-10 | 41 |
future forebrain | 2.24e-10 | 41 |
posterior neural tube | 2.37e-08 | 15 |
chordal neural plate | 2.37e-08 | 15 |
ecto-epithelium | 1.98e-07 | 104 |
pre-chordal neural plate | 5.46e-07 | 61 |
segmental subdivision of nervous system | 6.00e-07 | 13 |
brain grey matter | 7.53e-07 | 34 |
gray matter | 7.53e-07 | 34 |