FFCP PHASE1:Hg19::chr15:57232491..57232507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:57232491..57232507,+ | |||
|description=CAGE_peak_at_chr15:57232491..57232507,+ | |description=CAGE_peak_at_chr15:57232491..57232507,+ | ||
|id=chr15:57232491..57232507,+ | |id=chr15:57232491..57232507,+ | ||
|ontology_enrichment_celltype=CL:0002087!4.81e-09!119;CL:0000037!4.92e-09!172;CL:0000566!4.92e-09!172;CL:0002031!9.14e-09!124;CL:0002032!2.53e-08!165;CL:0000837!2.53e-08!165;CL:0000738!3.26e-07!140;CL:0000988!3.52e-07!182 | |ontology_enrichment_celltype=CL:0002087!4.81e-09!119;CL:0000037!4.92e-09!172;CL:0000566!4.92e-09!172;CL:0002031!9.14e-09!124;CL:0002032!2.53e-08!165;CL:0000837!2.53e-08!165;CL:0000738!3.26e-07!140;CL:0000988!3.52e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,9.16e-08,115;CL:0000623,1.50e-07,3;CL:0000825,1.50e-07,3;CL:0000738,2.25e-07,136;CL:0000064,5.30e-07,3;CL:0000067,5.30e-07,3;CL:0005012,5.30e-07,3;CL:0002304,5.30e-07,3;CL:0002605,6.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.41e-12!57;UBERON:0005068!3.41e-12!57;UBERON:0006241!3.41e-12!57;UBERON:0007135!3.41e-12!57;UBERON:0002780!1.62e-10!41;UBERON:0001890!1.62e-10!41;UBERON:0006240!1.62e-10!41;UBERON:0002616!6.49e-10!59;UBERON:0000955!7.24e-10!69;UBERON:0006238!7.24e-10!69;UBERON:0003080!7.43e-10!42;UBERON:0001893!2.78e-09!34;UBERON:0002020!3.95e-09!34;UBERON:0003528!3.95e-09!34;UBERON:0002791!5.15e-09!33;UBERON:0001017!5.51e-09!82;UBERON:0000073!1.42e-08!94;UBERON:0001016!1.42e-08!94;UBERON:0001869!2.96e-08!32;UBERON:0007023!3.11e-08!115;UBERON:0005743!6.84e-08!86;UBERON:0002346!2.54e-07!90 | |ontology_enrichment_uberon=UBERON:0001049!3.41e-12!57;UBERON:0005068!3.41e-12!57;UBERON:0006241!3.41e-12!57;UBERON:0007135!3.41e-12!57;UBERON:0002780!1.62e-10!41;UBERON:0001890!1.62e-10!41;UBERON:0006240!1.62e-10!41;UBERON:0002616!6.49e-10!59;UBERON:0000955!7.24e-10!69;UBERON:0006238!7.24e-10!69;UBERON:0003080!7.43e-10!42;UBERON:0001893!2.78e-09!34;UBERON:0002020!3.95e-09!34;UBERON:0003528!3.95e-09!34;UBERON:0002791!5.15e-09!33;UBERON:0001017!5.51e-09!82;UBERON:0000073!1.42e-08!94;UBERON:0001016!1.42e-08!94;UBERON:0001869!2.96e-08!32;UBERON:0007023!3.11e-08!115;UBERON:0005743!6.84e-08!86;UBERON:0002346!2.54e-07!90 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.34e-08,86;UBERON:0001049,3.62e-07,56;UBERON:0005068,3.62e-07,56;UBERON:0006241,3.62e-07,56;UBERON:0007135,3.62e-07,56;UBERON:0003075,4.28e-07,82;UBERON:0007284,4.28e-07,82;UBERON:0001778,5.30e-07,3;UBERON:0001775,5.30e-07,3;UBERON:0000073,7.38e-07,53;UBERON:0002616,7.38e-07,53 | |||
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| ||
|short_description=p@chr15:57232491..57232507,+ | |short_description=p@chr15:57232491..57232507,+ | ||
}} | }} |
Latest revision as of 02:47, 25 July 2015
Short description: | p@chr15:57232491..57232507, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:57232491..57232507, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 9.16e-08 | 115 |
natural killer cell | 1.50e-07 | 3 |
pro-NK cell | 1.50e-07 | 3 |
leukocyte | 2.25e-07 | 136 |
ciliated cell | 5.30e-07 | 3 |
ciliated epithelial cell | 5.30e-07 | 3 |
multi-ciliated epithelial cell | 5.30e-07 | 3 |
non-pigmented ciliary epithelial cell | 5.30e-07 | 3 |
astrocyte of the cerebral cortex | 6.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.34e-08 | 86 |
neural tube | 3.62e-07 | 56 |
neural rod | 3.62e-07 | 56 |
future spinal cord | 3.62e-07 | 56 |
neural keel | 3.62e-07 | 56 |
neural plate | 4.28e-07 | 82 |
presumptive neural plate | 4.28e-07 | 82 |
ciliary epithelium | 5.30e-07 | 3 |
ciliary body | 5.30e-07 | 3 |
regional part of nervous system | 7.38e-07 | 53 |
regional part of brain | 7.38e-07 | 53 |