FFCP PHASE1:Hg19::chr1:207504490..207504510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207504490..207504510,+ | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_at_chr1:207504490..207504510,+ | |description=CAGE_peak_at_chr1:207504490..207504510,+ | ||
|id=chr1:207504490..207504510,+ | |id=chr1:207504490..207504510,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.38e-21!45;CL:0002057!3.69e-19!42;CL:0000766!9.05e-15!76;CL:0000557!1.98e-12!71;CL:0000839!2.88e-12!70;CL:0000763!6.46e-12!112;CL:0000049!6.46e-12!112;CL:0002009!8.09e-12!65;CL:0002194!2.38e-11!63;CL:0000576!2.38e-11!63;CL:0000040!2.38e-11!63;CL:0000559!2.38e-11!63;CL:0000738!1.43e-09!140;CL:0002032!3.85e-08!165;CL:0000837!3.85e-08!165;CL:0000037!1.27e-07!172;CL:0000566!1.27e-07!172;CL:0002031!2.66e-07!124;CL:0002087!6.80e-07!119 | |ontology_enrichment_celltype=CL:0000860!4.38e-21!45;CL:0002057!3.69e-19!42;CL:0000766!9.05e-15!76;CL:0000557!1.98e-12!71;CL:0000839!2.88e-12!70;CL:0000763!6.46e-12!112;CL:0000049!6.46e-12!112;CL:0002009!8.09e-12!65;CL:0002194!2.38e-11!63;CL:0000576!2.38e-11!63;CL:0000040!2.38e-11!63;CL:0000559!2.38e-11!63;CL:0000738!1.43e-09!140;CL:0002032!3.85e-08!165;CL:0000837!3.85e-08!165;CL:0000037!1.27e-07!172;CL:0000566!1.27e-07!172;CL:0002031!2.66e-07!124;CL:0002087!6.80e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-27;33!CL:0002057;2.53e-27;33!CL:0000473;5.14e-20;39!CL:0000234;5.14e-20;39!CL:0000576;1.85e-14;48!CL:0000766;1.74e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-27,42;CL:0002057,1.52e-27,42;CL:0000473,5.32e-25,48;CL:0000234,5.32e-25,48;CL:0000766,1.91e-20,72;CL:0000839,3.46e-18,66;CL:0000557,8.10e-18,67;CL:0002009,6.50e-17,61;CL:0002194,8.05e-17,59;CL:0000576,8.05e-17,59;CL:0000040,8.05e-17,59;CL:0000559,8.05e-17,59;CL:0000763,6.15e-15,108;CL:0000049,6.15e-15,108;CL:0000738,8.54e-15,136;CL:0002031,2.20e-11,120;CL:0000037,3.07e-11,168;CL:0002032,3.83e-11,161;CL:0000837,3.83e-11,161;CL:0002087,4.05e-11,115;CL:0000988,1.73e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-20;42!UBERON:0008947;3.11e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-10!102;UBERON:0003061!2.19e-10!102;UBERON:0001474!7.08e-10!86;UBERON:0002371!7.73e-10!80;UBERON:0002193!8.15e-10!112;UBERON:0001737!4.88e-07!9;UBERON:0002405!5.90e-07!115;UBERON:0004765!9.57e-07!101;UBERON:0001434!9.57e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.98e-10;9!UBERON:0001557;6.98e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-15,76;UBERON:0001474,2.29e-14,82;UBERON:0002390,2.85e-13,98;UBERON:0003061,2.85e-13,98;UBERON:0004765,1.11e-11,90;UBERON:0002193,1.24e-11,108;UBERON:0002405,6.20e-11,93;UBERON:0001434,3.03e-10,100;UBERON:0001737,6.89e-10,9 | |||
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| ||
|short_description=p@chr1:207504490..207504510,+ | |short_description=p@chr1:207504490..207504510,+ | ||
}} | }} |
Latest revision as of 03:07, 28 July 2015
Short description: | p@chr1:207504490..207504510, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207504490..207504510, + |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.52e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-27 | 42 |
defensive cell | 5.32e-25 | 48 |
phagocyte | 5.32e-25 | 48 |
myeloid leukocyte | 1.91e-20 | 72 |
myeloid lineage restricted progenitor cell | 3.46e-18 | 66 |
granulocyte monocyte progenitor cell | 8.10e-18 | 67 |
macrophage dendritic cell progenitor | 6.50e-17 | 61 |
monopoietic cell | 8.05e-17 | 59 |
monocyte | 8.05e-17 | 59 |
monoblast | 8.05e-17 | 59 |
promonocyte | 8.05e-17 | 59 |
myeloid cell | 6.15e-15 | 108 |
common myeloid progenitor | 6.15e-15 | 108 |
leukocyte | 8.54e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.20e-11 | 120 |
hematopoietic stem cell | 3.07e-11 | 168 |
hematopoietic oligopotent progenitor cell | 3.83e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.83e-11 | 161 |
nongranular leukocyte | 4.05e-11 | 115 |
hematopoietic cell | 1.73e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.45e-15 | 76 |
bone element | 2.29e-14 | 82 |
hematopoietic system | 2.85e-13 | 98 |
blood island | 2.85e-13 | 98 |
skeletal element | 1.11e-11 | 90 |
hemolymphoid system | 1.24e-11 | 108 |
immune system | 6.20e-11 | 93 |
skeletal system | 3.03e-10 | 100 |
larynx | 6.89e-10 | 9 |