FFCP PHASE1:Hg19::chr15:81242954..81242966,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81242954..81242966,+ | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81242954..81242966,+ | |description=CAGE_peak_at_chr15:81242954..81242966,+ | ||
|id=chr15:81242954..81242966,+ | |id=chr15:81242954..81242966,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.86e-28!75;CL:0000055!1.78e-15!180;CL:0002620!3.15e-13!23;CL:1000306!1.46e-09!4;CL:0002547!1.46e-09!4;CL:0002334!1.53e-09!12;CL:0000135!1.49e-08!3;CL:0000386!1.49e-08!3;CL:0000388!1.49e-08!3;CL:0002579!1.85e-08!3;CL:0002580!2.64e-08!3;CL:0002615!2.77e-08!3;CL:0000048!7.02e-08!430;CL:0000723!1.49e-07!436;CL:0002320!3.40e-07!365;CL:0000034!3.90e-07!444;CL:0000134!4.32e-07!358;CL:0000630!7.46e-07!9 | |ontology_enrichment_celltype=CL:0000057!4.86e-28!75;CL:0000055!1.78e-15!180;CL:0002620!3.15e-13!23;CL:1000306!1.46e-09!4;CL:0002547!1.46e-09!4;CL:0002334!1.53e-09!12;CL:0000135!1.49e-08!3;CL:0000386!1.49e-08!3;CL:0000388!1.49e-08!3;CL:0002579!1.85e-08!3;CL:0002580!2.64e-08!3;CL:0002615!2.77e-08!3;CL:0000048!7.02e-08!430;CL:0000723!1.49e-07!436;CL:0002320!3.40e-07!365;CL:0000034!3.90e-07!444;CL:0000134!4.32e-07!358;CL:0000630!7.46e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.39e-23;3!CL:0000388;1.39e-23;3!CL:0002579;1.96e-23;3!CL:0002615;8.18e-23;3!CL:0002334;2.74e-22;12!CL:0000136;2.62e-14;13!CL:0002559;9.91e-14;5!CL:0002580;3.90e-11;3!CL:0000214;7.12e-11;3!CL:0000346;9.12e-11;3!CL:1000428;9.12e-11;3!CL:0002616;3.31e-09;1!CL:0000511;5.08e-09;1!CL:0002625;5.08e-09;1!CL:0000216;5.08e-09;1!CL:0002581;7.45e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.24e-23,3;CL:0000388,1.24e-23,3;CL:0002579,2.46e-23,3;CL:0002615,8.83e-23,3;CL:0002334,2.64e-22,12;CL:0000057,1.23e-16,76;CL:0002559,1.06e-13,5;CL:0000136,2.15e-12,15;CL:0002580,3.81e-11,3;CL:0000214,8.90e-11,3;CL:0000346,9.82e-11,3;CL:1000428,9.82e-11,3;CL:0002616,3.31e-09,1;CL:0000511,5.28e-09,1;CL:0002625,5.28e-09,1;CL:0000216,5.28e-09,1;CL:0002581,5.70e-09,1;CL:0000134,5.12e-07,354;CL:0002320,8.46e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.98e-07!5;DOID:450!1.98e-07!5;DOID:66!1.98e-07!5;DOID:423!1.98e-07!5;DOID:0080000!1.98e-07!5;DOID:11722!1.98e-07!5 | |ontology_enrichment_disease=DOID:17!1.98e-07!5;DOID:450!1.98e-07!5;DOID:66!1.98e-07!5;DOID:423!1.98e-07!5;DOID:0080000!1.98e-07!5;DOID:11722!1.98e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3369;1.53e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.63e-15!6;UBERON:0002358!4.63e-15!6;UBERON:0003684!4.63e-15!6;UBERON:0001178!4.63e-15!6;UBERON:0004457!2.34e-12!12;UBERON:0000042!2.34e-12!12;UBERON:0002097!7.33e-12!40;UBERON:0002199!4.63e-10!45;UBERON:0002416!4.63e-10!45;UBERON:0000415!1.46e-09!4;UBERON:0007240!1.46e-09!4;UBERON:0005742!1.46e-09!4;UBERON:0005734!1.46e-09!4;UBERON:0004664!1.46e-09!4;UBERON:0004663!1.46e-09!4;UBERON:0004923!1.05e-08!57;UBERON:0000043!1.49e-08!3;UBERON:0003102!7.64e-08!95;UBERON:0002384!3.70e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.56e-52;9!UBERON:0000042;6.56e-52;9!UBERON:0003688;1.97e-44;6!UBERON:0002358;1.97e-44;6!UBERON:0003684;1.97e-44;6!UBERON:0001178;1.97e-44;6!UBERON:0007846;1.39e-23;3!UBERON:0000043;1.39e-23;3!UBERON:0007845;1.39e-23;3!UBERON:0005406;2.44e-16;2!UBERON:0002073;9.91e-14;5!UBERON:0006915;7.12e-11;3!UBERON:0007616;7.12e-11;3!UBERON:0002217;7.12e-11;3!UBERON:0002018;7.12e-11;3!UBERON:0000412;9.12e-11;3!UBERON:0001992;9.12e-11;3!UBERON:0004923;1.48e-09;55!UBERON:0001136;5.08e-09;1!UBERON:0001343;5.08e-09;1!UBERON:0004910;5.08e-09;1!UBERON:0004813;5.08e-09;1!UBERON:0004458;1.58e-08;48!UBERON:0000310;2.31e-07;10!UBERON:0001443;9.89e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.67e-44,6;UBERON:0002358,2.67e-44,6;UBERON:0003684,2.67e-44,6;UBERON:0001178,2.67e-44,6;UBERON:0004457,1.63e-38,12;UBERON:0000042,1.63e-38,12;UBERON:0007846,1.24e-23,3;UBERON:0000043,1.24e-23,3;UBERON:0007845,1.24e-23,3;UBERON:0005406,1.87e-16,2;UBERON:0004923,6.23e-14,66;UBERON:0002073,1.06e-13,5;UBERON:0005086,1.06e-13,5;UBERON:0004458,5.93e-11,49;UBERON:0006915,8.90e-11,3;UBERON:0007616,8.90e-11,3;UBERON:0002217,8.90e-11,3;UBERON:0002018,8.90e-11,3;UBERON:0000412,9.82e-11,3;UBERON:0001992,9.82e-11,3;UBERON:0001136,5.28e-09,1;UBERON:0001343,5.28e-09,1;UBERON:0004910,5.28e-09,1;UBERON:0005154,5.28e-09,1;UBERON:0005295,5.28e-09,1;UBERON:0004813,5.28e-09,1;UBERON:0005297,5.28e-09,1;UBERON:0005294,5.28e-09,1;UBERON:0010141,5.28e-09,1;UBERON:0005891,5.28e-09,1;UBERON:0000310,2.17e-07,10;UBERON:0002384,2.32e-07,371;UBERON:0002323,3.44e-07,46;UBERON:0001443,9.33e-07,11 | |||
|phase1_expression=0.908391896352783,2.78330681058278,1.55049844505568,5.00366491765652,1.34088328328186,5.23403114460221,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.926864265692532,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,1.83892677479412,0.901428353439581,0.113432183160021,0.89694817844431,0.213557388818567,1.90738711043606,0,0.309157587715317,0.515281080091258,0.558350568994769,0.506328996723799,0.0974370051611986,0.757301322732344,0.644349290496095,1.45481451136931,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.434418072340414,0,0.686286847621712,0,0,0,0,0,0,0.992431231275107,2.76231551918512,4.49056151092918,2.17836553734692,2.55853624533352,5.30817939773905,2.96836132889982,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0.907385542579434,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83593523616777,4.62175628631418,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.908391896352783,2.78330681058278,1.55049844505568,5.00366491765652,1.34088328328186,5.23403114460221,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.926864265692532,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,1.83892677479412,0.901428353439581,0.113432183160021,0.89694817844431,0.213557388818567,1.90738711043606,0,0.309157587715317,0.515281080091258,0.558350568994769,0.506328996723799,0.0974370051611986,0.757301322732344,0.644349290496095,1.45481451136931,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.434418072340414,0,0.686286847621712,0,0,0,0,0,0,0.992431231275107,2.76231551918512,4.49056151092918,2.17836553734692,2.55853624533352,5.30817939773905,2.96836132889982,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0.907385542579434,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83593523616777,4.62175628631418,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:81242954..81242966,+ | |short_description=p@chr15:81242954..81242966,+ | ||
}} | }} |
Latest revision as of 04:50, 25 July 2015
Short description: | p@chr15:81242954..81242966, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81242954..81242966, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.24e-23 | 3 |
tendon cell | 1.24e-23 | 3 |
omentum preadipocyte | 2.46e-23 | 3 |
adipocyte of omentum tissue | 8.83e-23 | 3 |
preadipocyte | 2.64e-22 | 12 |
fibroblast | 1.23e-16 | 76 |
hair follicle cell | 1.06e-13 | 5 |
fat cell | 2.15e-12 | 15 |
preadipocyte of the breast | 3.81e-11 | 3 |
synovial cell | 8.90e-11 | 3 |
hair follicle dermal papilla cell | 9.82e-11 | 3 |
stem cell of epidermis | 9.82e-11 | 3 |
perirenal adipocyte cell | 3.31e-09 | 1 |
androgen binding protein secreting cell | 5.28e-09 | 1 |
seminiferous tubule epithelial cell | 5.28e-09 | 1 |
Sertoli cell | 5.28e-09 | 1 |
perirenal preadipocyte | 5.70e-09 | 1 |
mesenchymal cell | 5.12e-07 | 354 |
connective tissue cell | 8.46e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.67e-44 | 6 |
peritoneum | 2.67e-44 | 6 |
abdominal cavity | 2.67e-44 | 6 |
visceral peritoneum | 2.67e-44 | 6 |
cavity lining | 1.63e-38 | 12 |
serous membrane | 1.63e-38 | 12 |
dense regular connective tissue | 1.24e-23 | 3 |
tendon | 1.24e-23 | 3 |
regular connective tissue | 1.24e-23 | 3 |
perirenal fat | 1.87e-16 | 2 |
organ component layer | 6.23e-14 | 66 |
hair follicle | 1.06e-13 | 5 |
hair follicle placode | 1.06e-13 | 5 |
body cavity or lining | 5.93e-11 | 49 |
stratified squamous epithelium | 8.90e-11 | 3 |
layer of synovial tissue | 8.90e-11 | 3 |
synovial joint | 8.90e-11 | 3 |
synovial membrane of synovial joint | 8.90e-11 | 3 |
dermal papilla | 9.82e-11 | 3 |
papillary layer of dermis | 9.82e-11 | 3 |
mesothelium | 5.28e-09 | 1 |
seminiferous tubule of testis | 5.28e-09 | 1 |
epithelium of male gonad | 5.28e-09 | 1 |
epithelial cord | 5.28e-09 | 1 |
sex cord | 5.28e-09 | 1 |
seminiferous tubule epithelium | 5.28e-09 | 1 |
testis sex cord | 5.28e-09 | 1 |
genital ridge | 5.28e-09 | 1 |
primitive sex cord of indifferent gonad | 5.28e-09 | 1 |
coelomic epithelium | 5.28e-09 | 1 |
breast | 2.17e-07 | 10 |
connective tissue | 2.32e-07 | 371 |
body cavity | 3.44e-07 | 46 |
chest | 9.33e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.05e-08 | 1 |