FFCP PHASE1:Hg19::chr15:90809334..90809354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51335 | |EntrezGene=51335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18077 | |HGNC=18077 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=439bp_to_NR_028052,uc002bpg.1_5end | |association_with_transcript=439bp_to_NR_028052,uc002bpg.1_5end | ||
|cluster_id=chr15:90809334..90809354,+ | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_7_at_NGRN_5end | |description=CAGE_peak_7_at_NGRN_5end | ||
|id=chr15:90809334..90809354,+ | |id=chr15:90809334..90809354,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.58e-23;6!CL:0000791;2.11e-16;18!CL:0000789;2.11e-16;18!CL:0002419;2.11e-16;18!CL:0000623;5.60e-13;3!CL:0000898;2.72e-12;3!CL:0000226;2.93e-12;3!CL:0000842;2.93e-12;3!CL:0000767;3.41e-12;3!CL:0000084;2.62e-11;25!CL:0000542;7.99e-11;53!CL:0000815;1.08e-08;2!CL:0000792;1.08e-08;2!CL:0002677;1.08e-08;2!CL:0000236;4.04e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.26e-23,6;CL:0000838,8.24e-18,52;CL:0000542,2.15e-17,53;CL:0000051,2.15e-17,53;CL:0000791,2.34e-16,18;CL:0000789,2.34e-16,18;CL:0002420,2.34e-16,18;CL:0002419,2.34e-16,18;CL:0000790,2.34e-16,18;CL:0000623,5.73e-13,3;CL:0000825,5.73e-13,3;CL:0000738,1.15e-12,136;CL:0000226,3.36e-12,3;CL:0000898,3.36e-12,3;CL:0000842,3.36e-12,3;CL:0000767,3.62e-12,3;CL:0002087,5.28e-12,115;CL:0000084,2.81e-11,25;CL:0000827,2.81e-11,25;CL:0000037,4.37e-09,168;CL:0000815,1.38e-08,2;CL:0000792,1.38e-08,2;CL:0002677,1.38e-08,2;CL:0000988,2.55e-08,177;CL:0002031,5.29e-08,120;CL:0002032,4.66e-07,161;CL:0000837,4.66e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.11e-16;18!CL:0000051;7.99e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.60e-11!34;UBERON:0003528!8.60e-11!34;UBERON:0001869!3.06e-10!32;UBERON:0001893!1.57e-09!34;UBERON:0002791!2.92e-09!33;UBERON:0003080!1.07e-08!42;UBERON:0001049!1.22e-08!57;UBERON:0005068!1.22e-08!57;UBERON:0006241!1.22e-08!57;UBERON:0007135!1.22e-08!57;UBERON:0001017!2.14e-08!82;UBERON:0002780!3.39e-08!41;UBERON:0001890!3.39e-08!41;UBERON:0006240!3.39e-08!41;UBERON:0005743!1.37e-07!86;UBERON:0002619!1.52e-07!22;UBERON:0000956!2.24e-07!25;UBERON:0000203!2.24e-07!25;UBERON:0002616!5.73e-07!59;UBERON:0000955!9.57e-07!69;UBERON:0006238!9.57e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.410623275218653,0.251085279189606,0.229240217243854,0,0.0787107813136792,3.14691421479123,4.22212337906934,2.32224184974114,0,0.6024118375565,0,0.0774672005803016,0.710846162437108,0.293600439334847,2.76997704265939,1.80490002723128,2.38711957787437,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,1.70692089026603,0,0.574752439954483,0.661044872784862,0,7.96898156753228,9.98303221930596,31.3464047062688,0,1.68152568894461,0,10.622327586147,10.2182798314783,9.86887195197644,0,5.21475626613745,3.78758244587787,0,0.334231370655521,2.06224135232386,1.10766947291811,2.97884250141517,0,0.130059347559878,0,0,0,2.66915813691709,0.535081656179426,2.09071047609954,0,5.74830740402882,2.74901956386104,5.56643322442906,0,0,0,0.150575119077773,0,0,0,0,20.9671012953722,11.7673686144743,15.2065624076939,2.43806866313962,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,1.11332214173056,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0.626984899610432,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0,0.265059536642971,0,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.482022059766964,0.220587945464788,0.217879444092406,0,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.925971025153221,0.380508304469197,1.58040879591855,0.858486162094873,0,0,0,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.75745460055828,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0.112085143993527,14.1862147345388,13.5845372161496,11.5508732651774,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0,0,0.414415513436035,0,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,2.06768026122887,3.8828556147351,6.08347079479633,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,0,0.2023155617111,0,0,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0.962479855263359,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0.111443384277478,0,0.47748896947538,0,0,0.994147647766298,0.844016498463076,0,0.16480387422676,0.422250816255987,0.597743964753209,0.276283915531148,1.76352923497993,0.102268682502155,0.369254416383208,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.463840490809256,0,0,0.0874599999961957,1.44999915086959,0.1137934482855,0.508507300585533,0,2.06846023944879,0.583209226766509,0,0.885741385813839,0.723578631752448,0,0.221158519862449,0,1.31631238292384,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0,0,0.234264445725339,0,0,0.242780379534093,0.394584402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| ||
|short_description=p7@NGRN | |short_description=p7@NGRN | ||
}} | }} |
Latest revision as of 19:34, 19 September 2015
Short description: | p7@NGRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NGRN_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | 439bp_to_NR_028052, uc002bpg.1_5end |
EntrezGene: | NGRN |
HGNC: | 18077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.26e-23 | 6 |
lymphoid lineage restricted progenitor cell | 8.24e-18 | 52 |
lymphocyte | 2.15e-17 | 53 |
common lymphoid progenitor | 2.15e-17 | 53 |
mature alpha-beta T cell | 2.34e-16 | 18 |
alpha-beta T cell | 2.34e-16 | 18 |
immature T cell | 2.34e-16 | 18 |
mature T cell | 2.34e-16 | 18 |
immature alpha-beta T cell | 2.34e-16 | 18 |
natural killer cell | 5.73e-13 | 3 |
pro-NK cell | 5.73e-13 | 3 |
leukocyte | 1.15e-12 | 136 |
single nucleate cell | 3.36e-12 | 3 |
naive T cell | 3.36e-12 | 3 |
mononuclear cell | 3.36e-12 | 3 |
basophil | 3.62e-12 | 3 |
nongranular leukocyte | 5.28e-12 | 115 |
T cell | 2.81e-11 | 25 |
pro-T cell | 2.81e-11 | 25 |
hematopoietic stem cell | 4.37e-09 | 168 |
regulatory T cell | 1.38e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.38e-08 | 2 |
naive regulatory T cell | 1.38e-08 | 2 |
hematopoietic cell | 2.55e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 5.29e-08 | 120 |
hematopoietic oligopotent progenitor cell | 4.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.66e-07 | 161 |