FFCP PHASE1:Hg19::chr1:239550009..239550033,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1131 | |EntrezGene=1131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |HGNC=1952 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=144bp_to_ENST00000468573,uc001hyo.1_5end | |association_with_transcript=144bp_to_ENST00000468573,uc001hyo.1_5end | ||
|cluster_id=chr1:239550009..239550033,+ | |||
|coexpression_cluster_id=C1067 | |||
|description=CAGE_peak_4_at_CHRM3_5end | |description=CAGE_peak_4_at_CHRM3_5end | ||
|id=chr1:239550009..239550033,+ | |id=chr1:239550009..239550033,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.74e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.49e-44!115;UBERON:0001017!1.08e-38!82;UBERON:0000073!2.28e-38!94;UBERON:0001016!2.28e-38!94;UBERON:0005743!7.41e-38!86;UBERON:0000955!2.54e-34!69;UBERON:0006238!2.54e-34!69;UBERON:0002780!2.60e-33!41;UBERON:0001890!2.60e-33!41;UBERON:0006240!2.60e-33!41;UBERON:0001869!4.59e-33!32;UBERON:0001893!1.12e-32!34;UBERON:0002020!2.29e-32!34;UBERON:0003528!2.29e-32!34;UBERON:0003080!3.03e-32!42;UBERON:0001049!1.01e-31!57;UBERON:0005068!1.01e-31!57;UBERON:0006241!1.01e-31!57;UBERON:0007135!1.01e-31!57;UBERON:0002791!2.46e-31!33;UBERON:0001950!3.19e-30!20;UBERON:0002619!7.81e-30!22;UBERON:0000956!1.80e-27!25;UBERON:0000203!1.80e-27!25;UBERON:0002616!6.48e-27!59;UBERON:0003075!2.47e-23!86;UBERON:0007284!2.47e-23!86;UBERON:0003056!1.25e-22!61;UBERON:0002346!1.24e-21!90;UBERON:0000033!4.54e-21!123;UBERON:0000153!2.57e-20!129;UBERON:0007811!2.57e-20!129;UBERON:0004121!2.36e-19!169;UBERON:0000924!1.88e-18!173;UBERON:0006601!1.88e-18!173;UBERON:0001871!1.39e-12!7;UBERON:0000922!6.04e-11!612;UBERON:0000200!5.80e-10!6;UBERON:0000481!6.03e-10!347;UBERON:0000468!2.18e-09!659;UBERON:0000062!4.49e-09!511;UBERON:0000475!1.07e-08!365;UBERON:0002021!2.52e-08!5;UBERON:0002050!2.79e-08!605;UBERON:0005423!2.79e-08!605;UBERON:0001872!4.14e-08!5;UBERON:0000923!6.52e-08!604;UBERON:0005291!6.52e-08!604;UBERON:0006598!6.52e-08!604;UBERON:0002532!6.52e-08!604;UBERON:0000467!9.54e-08!625;UBERON:0000480!1.11e-07!626;UBERON:0002420!2.55e-07!9;UBERON:0007245!2.55e-07!9;UBERON:0010009!2.55e-07!9;UBERON:0010011!2.55e-07!9;UBERON:0000454!2.55e-07!9;UBERON:0004111!5.05e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.13e-59;22!UBERON:0001950;6.77e-59;20!UBERON:0000956;1.85e-51;25!UBERON:0000203;1.85e-51;25!UBERON:0001869;6.29e-47;32!UBERON:0002791;1.97e-43;32!UBERON:0001893;4.13e-42;34!UBERON:0003528;3.25e-39;34!UBERON:0002020;3.25e-39;34!UBERON:0002780;8.04e-31;41!UBERON:0001890;8.04e-31;41!UBERON:0001871;2.26e-22;6!UBERON:0000200;9.08e-20;6!UBERON:0000073;1.49e-17;53!UBERON:0002616;1.49e-17;53!UBERON:0002021;1.56e-16;5!UBERON:0001017;3.63e-16;75!UBERON:0000955;1.35e-14;68!UBERON:0001016;2.61e-14;83!UBERON:0001870;2.48e-11;3!UBERON:0001872;8.57e-11;5!UBERON:0000349;9.13e-11;5!UBERON:0007023;1.28e-10;114!UBERON:0011216;1.60e-09;132!UBERON:0002702;4.25e-08;2!UBERON:0002771;7.67e-08;2!UBERON:0001876;1.41e-07;2!UBERON:0001829;1.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.26e-59,22;UBERON:0001950,4.56e-59,20;UBERON:0001869,2.41e-52,32;UBERON:0000956,1.34e-51,25;UBERON:0000203,1.34e-51,25;UBERON:0001893,5.74e-49,34;UBERON:0002791,7.79e-48,32;UBERON:0003528,9.85e-45,34;UBERON:0002020,9.85e-45,34;UBERON:0002780,5.00e-43,41;UBERON:0001890,5.00e-43,41;UBERON:0003080,5.00e-43,41;UBERON:0006240,5.00e-43,41;UBERON:0001017,2.06e-34,81;UBERON:0001016,2.14e-34,89;UBERON:0001049,1.96e-32,56;UBERON:0005068,1.96e-32,56;UBERON:0006241,1.96e-32,56;UBERON:0007135,1.96e-32,56;UBERON:0007023,2.71e-32,114;UBERON:0000955,4.42e-32,68;UBERON:0006238,4.42e-32,68;UBERON:0000073,6.29e-32,53;UBERON:0002616,6.29e-32,53;UBERON:0003056,7.64e-32,61;UBERON:0003075,9.22e-24,82;UBERON:0007284,9.22e-24,82;UBERON:0011216,7.34e-23,223;UBERON:0001871,1.16e-22,6;UBERON:0002346,2.51e-22,86;UBERON:0000200,5.80e-20,6;UBERON:0004121,1.33e-18,171;UBERON:0000924,1.33e-18,171;UBERON:0006601,1.33e-18,171;UBERON:0010371,3.09e-17,104;UBERON:0002021,2.24e-16,5;UBERON:0010314,2.66e-13,132;UBERON:0001870,3.04e-11,3;UBERON:0001872,7.11e-11,5;UBERON:0000349,7.29e-11,5;UBERON:0002702,5.05e-08,2;UBERON:0004111,6.05e-08,240;UBERON:0002771,6.40e-08,2;UBERON:0001876,9.24e-08,2;UBERON:0001829,1.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05836791361941,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,1.9882952955326,5.34543782359948,0,0,0,0.398495976502139,1.93398740871803,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,2.66337195219721,0,0,1.93866549219044,2.04089815956073,3.99227596002388,0,0,0,0,0,0,0,0,0,3.54296554325536,0.241192877250816,0,0,0,2.4132393686937,0,0.139423744278603,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.707660516026713,1.22206028986725,0.296521128680622,0,0,0.269604531922708,1.60515529459758,0,0,0.391329237864179,0,7.89168805698781,3.62972148145992,1.53036380815245,0.884612114798832,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,3.26547668758551,0.677942222341597,0.274083849293502,0,4.17851253308799,0,0,0.426905989478705,0,0,0.343609788497747,0,0,0,0,0.67952103036807,1.15063130943567,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,2.31545790389679,0.160753148465019,0,0,0,0,4.61696630600987,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,5.31640907980192,2.92863035764712,3.004582336956,0,0.443716206147409,0.248385611765534,0.968440444553616,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0,0,0,4.00949464840019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,1.31051565830417,0,0,0,0,0,0,0,0,0,2.11956442818316,2.8339315265117,3.03304332208587,2.05116364240755,2.01657356977374,2.35134658378341,4.52131807769183,1.42769420259154,0,0,0,0,0,0,0.397832444232549,1.72983755203292,0,1.56302802246618,0,0,0,2.43135304626221,0.781078098613847,3.30698874401895,2.09272173639893,3.82882366312754,1.64477330057155,0.992422356778588,0,0.255524855279191,1.07140367175657,0,0,0.227662191351298,0,0,0,0.611727596791485,1.90741043332262,0,1.11231401892069,2.27629969266491,0.471346769748006,0,0.913158720509496,0,0,2.35872595782966,0.158013611732727,0,0,0,0.207216164163037,0,0,1.29068207646083,0,0,5.50403165248208,0.4582137370881,0,0,0,0,0.365753774946808,0,0,1.1598144313382,0,0,0,0,2.2589216407792,0,0,0.231522474323834,0.218559560503957,0,7.59959797437107,0,0.196308467114945,0,1.2679671827502,0,0,0.193373663920732,0,0,0,0,1.46067277649303,4.58729283404541,0,0,2.10773619591836,3.05445483238264,2.645134202577,0,0,0,0,0,0.253397002022874,0,0,0.18378979906969,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0,1.1903221573187,0,0,0.33639558774184,0.12729431655633,0.808468755832877,0,0,0.202056159043763,0.143444410785353,0.99798106963804,0,0,0,0,0,0.488965776731466,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05836791361941,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,1.9882952955326,5.34543782359948,0,0,0,0.398495976502139,1.93398740871803,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,2.66337195219721,0,0,1.93866549219044,2.04089815956073,3.99227596002388,0,0,0,0,0,0,0,0,0,3.54296554325536,0.241192877250816,0,0,0,2.4132393686937,0,0.139423744278603,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.707660516026713,1.22206028986725,0.296521128680622,0,0,0.269604531922708,1.60515529459758,0,0,0.391329237864179,0,7.89168805698781,3.62972148145992,1.53036380815245,0.884612114798832,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,3.26547668758551,0.677942222341597,0.274083849293502,0,4.17851253308799,0,0,0.426905989478705,0,0,0.343609788497747,0,0,0,0,0.67952103036807,1.15063130943567,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,2.31545790389679,0.160753148465019,0,0,0,0,4.61696630600987,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,5.31640907980192,2.92863035764712,3.004582336956,0,0.443716206147409,0.248385611765534,0.968440444553616,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0,0,0,4.00949464840019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,1.31051565830417,0,0,0,0,0,0,0,0,0,2.11956442818316,2.8339315265117,3.03304332208587,2.05116364240755,2.01657356977374,2.35134658378341,4.52131807769183,1.42769420259154,0,0,0,0,0,0,0.397832444232549,1.72983755203292,0,1.56302802246618,0,0,0,2.43135304626221,0.781078098613847,3.30698874401895,2.09272173639893,3.82882366312754,1.64477330057155,0.992422356778588,0,0.255524855279191,1.07140367175657,0,0,0.227662191351298,0,0,0,0.611727596791485,1.90741043332262,0,1.11231401892069,2.27629969266491,0.471346769748006,0,0.913158720509496,0,0,2.35872595782966,0.158013611732727,0,0,0,0.207216164163037,0,0,1.29068207646083,0,0,5.50403165248208,0.4582137370881,0,0,0,0,0.365753774946808,0,0,1.1598144313382,0,0,0,0,2.2589216407792,0,0,0.231522474323834,0.218559560503957,0,7.59959797437107,0,0.196308467114945,0,1.2679671827502,0,0,0.193373663920732,0,0,0,0,1.46067277649303,4.58729283404541,0,0,2.10773619591836,3.05445483238264,2.645134202577,0,0,0,0,0,0.253397002022874,0,0,0.18378979906969,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0,1.1903221573187,0,0,0.33639558774184,0.12729431655633,0.808468755832877,0,0,0.202056159043763,0.143444410785353,0.99798106963804,0,0,0,0,0,0.488965776731466,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p4@CHRM3 | |short_description=p4@CHRM3 | ||
}} | }} |
Latest revision as of 16:24, 16 September 2015
Short description: | p4@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHRM3_5end |
Coexpression cluster: | C1067_ductus_salivary_smooth_submaxillary_medial_parotid_seminal |
Association with transcript: | 144bp_to_ENST00000468573, uc001hyo.1_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data