FFCP PHASE1:Hg19::chr1:77424411..77424419,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:77424411..77424419,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_at_chr1:77424411..77424419,+ | |description=CAGE_peak_at_chr1:77424411..77424419,+ | ||
|id=chr1:77424411..77424419,+ | |id=chr1:77424411..77424419,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.51e-08!23 | |ontology_enrichment_celltype=CL:0002620!2.51e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002568;2.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,3.62e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.91e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.66e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.99e-19!82;UBERON:0000073!5.96e-18!94;UBERON:0001016!5.96e-18!94;UBERON:0005743!2.25e-17!86;UBERON:0002020!2.28e-17!34;UBERON:0003528!2.28e-17!34;UBERON:0001869!3.53e-17!32;UBERON:0002780!5.07e-17!41;UBERON:0001890!5.07e-17!41;UBERON:0006240!5.07e-17!41;UBERON:0002791!1.77e-16!33;UBERON:0003080!1.90e-16!42;UBERON:0002619!6.98e-16!22;UBERON:0001893!8.08e-16!34;UBERON:0000956!3.95e-15!25;UBERON:0000203!3.95e-15!25;UBERON:0000955!6.61e-15!69;UBERON:0006238!6.61e-15!69;UBERON:0001049!7.42e-15!57;UBERON:0005068!7.42e-15!57;UBERON:0006241!7.42e-15!57;UBERON:0007135!7.42e-15!57;UBERON:0002616!6.43e-14!59;UBERON:0001950!3.65e-13!20;UBERON:0000924!6.25e-13!173;UBERON:0006601!6.25e-13!173;UBERON:0004121!6.86e-13!169;UBERON:0007023!2.44e-12!115;UBERON:0003056!3.84e-11!61;UBERON:0003075!1.78e-10!86;UBERON:0007284!1.78e-10!86;UBERON:0002346!2.10e-10!90;UBERON:0000033!4.71e-09!123;UBERON:0000153!8.72e-09!129;UBERON:0007811!8.72e-09!129;UBERON:0002097!4.63e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.95e-20;22!UBERON:0000956;1.49e-17;25!UBERON:0000203;1.49e-17;25!UBERON:0001869;7.57e-17;32!UBERON:0002780;1.55e-16;41!UBERON:0001890;1.55e-16;41!UBERON:0002791;3.46e-16;32!UBERON:0003528;4.10e-14;34!UBERON:0002020;4.10e-14;34!UBERON:0001905;4.54e-14;2!UBERON:0002757;4.54e-14;2!UBERON:0010134;4.54e-14;2!UBERON:0005408;4.54e-14;2!UBERON:0001899;4.54e-14;2!UBERON:0001950;2.06e-13;20!UBERON:0001893;2.77e-13;34!UBERON:0001954;2.81e-13;2!UBERON:0003022;2.81e-13;2!UBERON:0002421;2.81e-13;2!UBERON:0002600;2.81e-13;2!UBERON:0000349;1.10e-11;5!UBERON:0002021;1.64e-11;5!UBERON:0002114;4.68e-09;2!UBERON:0000073;6.90e-08;53!UBERON:0002616;6.90e-08;53!UBERON:0002171;8.81e-08;1!UBERON:0006518;8.81e-08;1!UBERON:0008949;8.81e-08;1!UBERON:0000101;8.81e-08;1!UBERON:0002167;8.81e-08;1!UBERON:0003296;1.89e-07;4!UBERON:0010133;1.89e-07;4!UBERON:0002784;1.89e-07;4!UBERON:0007029;2.91e-07;1!UBERON:0001154;2.91e-07;1!UBERON:0001153;2.91e-07;1!UBERON:0009854;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.68e-20,22;UBERON:0002780,6.01e-19,41;UBERON:0001890,6.01e-19,41;UBERON:0003080,6.01e-19,41;UBERON:0006240,6.01e-19,41;UBERON:0000956,1.15e-17,25;UBERON:0000203,1.15e-17,25;UBERON:0002791,6.90e-17,32;UBERON:0001869,6.90e-17,32;UBERON:0003528,8.03e-16,34;UBERON:0002020,8.03e-16,34;UBERON:0001893,8.03e-16,34;UBERON:0001049,8.96e-16,56;UBERON:0005068,8.96e-16,56;UBERON:0006241,8.96e-16,56;UBERON:0007135,8.96e-16,56;UBERON:0000073,3.22e-14,53;UBERON:0002616,3.22e-14,53;UBERON:0001905,4.55e-14,2;UBERON:0002757,4.55e-14,2;UBERON:0010134,4.55e-14,2;UBERON:0005408,4.55e-14,2;UBERON:0001899,4.55e-14,2;UBERON:0001950,1.54e-13,20;UBERON:0001954,3.18e-13,2;UBERON:0003022,3.18e-13,2;UBERON:0002421,3.18e-13,2;UBERON:0002600,3.18e-13,2;UBERON:0000955,2.50e-12,68;UBERON:0006238,2.50e-12,68;UBERON:0003056,4.38e-12,61;UBERON:0001016,4.82e-12,89;UBERON:0001017,9.86e-12,81;UBERON:0000349,1.20e-11,5;UBERON:0002021,1.50e-11,5;UBERON:0010371,3.49e-10,104;UBERON:0003075,4.99e-10,82;UBERON:0007284,4.99e-10,82;UBERON:0002346,1.89e-09,86;UBERON:0002114,6.74e-09,2;UBERON:0004121,8.82e-09,171;UBERON:0000924,8.82e-09,171;UBERON:0006601,8.82e-09,171;UBERON:0002171,9.10e-08,1;UBERON:0006518,9.10e-08,1;UBERON:0008949,9.10e-08,1;UBERON:0000101,9.10e-08,1;UBERON:0002167,9.10e-08,1;UBERON:0011216,1.35e-07,223;UBERON:0003296,1.89e-07,4;UBERON:0010133,1.89e-07,4;UBERON:0002784,1.89e-07,4;UBERON:0007029,2.50e-07,1;UBERON:0001154,3.20e-07,1;UBERON:0001153,3.20e-07,1;UBERON:0001045,3.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,1.07633781413317,0.213557388818567,0,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.757301322732344,0,0.323292113637624,1.06502877754984,0.403008392910561,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.2507106625682,0,0,0,0,1.38141957765574,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,1.39152147242777,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0.291604613383254,1.56262495439963,4.42870692906919,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,4.77137813885582,1.36203406111576,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,1.57204305099666,7.45630299624952,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.500763722825999,0.573409195690071,0,0,0.691743174681154,0,0,0,0,7.49335849291011,0.579684114443301,0,0,0,0,0.251567901752575,0,0,0,0,0,0.477890301491107,0,0.310525913752519,0,0,0,0.901545653983311,0.761610424337591,0,0.545545977607678,0.429642228169954,0.464033759878494,4.77715066438339,0,0,0,0,0,2.78774068787403,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,8.69681724864831,0.107824811396682,0,0.764467467344097,0,0.212574920101683,0,0,0,0,0,0,0,0,1.41696576325585,0.478901577171454,4.30744364905586,1.51243017733031,0,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,0.376051641746286,0,0,0,0.327543835020193,0,0,1.56215619722769,0.826747186004736,0,27.348740450911,0,0,0,0,53.5701835878287,10.0885116665647,0,0,0,0.115233987555779,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0.94808167039636,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,3.89481676524885,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0.11294608203896,0.549702583727146,0,0.0771741581079447,0,0,0,0,0,0,1.6906229103336,0.339854229375634,0,0,0,0,0,0,0.730336388246517,0,0,0,0,2.18175345170189,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.99798106963804,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,1.07633781413317,0.213557388818567,0,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.757301322732344,0,0.323292113637624,1.06502877754984,0.403008392910561,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.2507106625682,0,0,0,0,1.38141957765574,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,1.39152147242777,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0.291604613383254,1.56262495439963,4.42870692906919,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,4.77137813885582,1.36203406111576,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,1.57204305099666,7.45630299624952,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.500763722825999,0.573409195690071,0,0,0.691743174681154,0,0,0,0,7.49335849291011,0.579684114443301,0,0,0,0,0.251567901752575,0,0,0,0,0,0.477890301491107,0,0.310525913752519,0,0,0,0.901545653983311,0.761610424337591,0,0.545545977607678,0.429642228169954,0.464033759878494,4.77715066438339,0,0,0,0,0,2.78774068787403,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,8.69681724864831,0.107824811396682,0,0.764467467344097,0,0.212574920101683,0,0,0,0,0,0,0,0,1.41696576325585,0.478901577171454,4.30744364905586,1.51243017733031,0,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,0.376051641746286,0,0,0,0.327543835020193,0,0,1.56215619722769,0.826747186004736,0,27.348740450911,0,0,0,0,53.5701835878287,10.0885116665647,0,0,0,0.115233987555779,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0.94808167039636,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,3.89481676524885,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0.11294608203896,0.549702583727146,0,0.0771741581079447,0,0,0,0,0,0,1.6906229103336,0.339854229375634,0,0,0,0,0,0,0.730336388246517,0,0,0,0,2.18175345170189,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.99798106963804,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:77424411..77424419,+ | |short_description=p@chr1:77424411..77424419,+ | ||
}} | }} |
Latest revision as of 10:22, 28 July 2015
Short description: | p@chr1:77424411..77424419, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:77424411..77424419, + |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.66e-07 | 1 |