FFCP PHASE1:Hg19::chr11:66675371..66675430,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:66675371..66675430,-
|short_description=p3@PC
|description=CAGE_peak_3_at_PC_5end
|association_with_transcript=0bp_to_ENST00000393955_5end
|EntrezGene=50...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5091 | |EntrezGene=5091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8636 | |HGNC=8636 | ||
|TSSclassifier=strong | |||
|UniProt=P11498 | |UniProt=P11498 | ||
|association_with_transcript=0bp_to_ENST00000393955_5end | |||
|cluster_id=chr11:66675371..66675430,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_PC_5end | |||
|id=chr11:66675371..66675430,- | |||
|ontology_enrichment_celltype=CL:0000136!2.26e-10!15;CL:0000181!3.54e-09!12;CL:0000417!3.54e-09!12;CL:0000668!3.54e-09!12;CL:0000414!3.54e-09!12;CL:0000412!3.54e-09!12;CL:0000182!3.54e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.79e-27;13!CL:0000182;2.61e-20;12!CL:0002521;2.52e-10;3!CL:0002615;1.40e-09;3!CL:0002575;8.54e-08;2!CL:0002549;1.02e-07;2!CL:0002602;5.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.89e-23,15;CL:0000182,2.65e-20,12;CL:0002521,1.79e-10,3;CL:0002615,2.08e-09,3;CL:0002575,8.41e-08,2;CL:0002549,1.09e-07,2;CL:0002602,5.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.20e-13;11!UBERON:0009497;2.26e-11;13!UBERON:0003104;6.34e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.94e-36!115;UBERON:0002616!9.13e-22!59;UBERON:0001049!6.48e-20!57;UBERON:0005068!6.48e-20!57;UBERON:0006241!6.48e-20!57;UBERON:0007135!6.48e-20!57;UBERON:0001017!8.63e-19!82;UBERON:0000955!1.72e-18!69;UBERON:0006238!1.72e-18!69;UBERON:0005743!2.31e-18!86;UBERON:0003075!1.85e-17!86;UBERON:0007284!1.85e-17!86;UBERON:0000073!2.42e-16!94;UBERON:0001016!2.42e-16!94;UBERON:0002346!4.52e-16!90;UBERON:0003080!5.64e-16!42;UBERON:0002780!6.19e-15!41;UBERON:0001890!6.19e-15!41;UBERON:0006240!6.19e-15!41;UBERON:0000153!3.04e-13!129;UBERON:0007811!3.04e-13!129;UBERON:0002107!1.36e-12!19;UBERON:0006925!1.36e-12!19;UBERON:0008836!1.36e-12!19;UBERON:0000033!1.54e-12!123;UBERON:0003056!4.22e-12!61;UBERON:0009854!4.54e-11!23;UBERON:0002368!1.24e-10!35;UBERON:0008835!2.98e-10!22;UBERON:0003894!2.98e-10!22;UBERON:0000475!3.06e-10!365;UBERON:0005057!3.08e-10!26;UBERON:0000477!1.03e-09!286;UBERON:0004121!1.30e-09!169;UBERON:0001893!1.77e-09!34;UBERON:0009856!3.04e-09!26;UBERON:0000924!4.78e-09!173;UBERON:0006601!4.78e-09!173;UBERON:0002791!5.74e-09!33;UBERON:0000481!6.86e-09!347;UBERON:0000949!7.13e-09!45;UBERON:0002020!1.57e-08!34;UBERON:0003528!1.57e-08!34;UBERON:0007499!1.69e-08!25;UBERON:0009497!1.69e-08!25;UBERON:0000015!1.69e-08!25;UBERON:0002423!1.69e-08!25;UBERON:0006235!1.69e-08!25;UBERON:0004161!1.69e-08!25;UBERON:0001894!1.71e-08!7;UBERON:0006222!1.71e-08!7;UBERON:0002365!4.09e-08!31;UBERON:0002330!4.09e-08!31;UBERON:0004111!4.74e-08!241;UBERON:0000025!5.14e-08!194;UBERON:0001869!6.42e-08!32;UBERON:0000062!1.14e-07!511;UBERON:0002530!3.14e-07!59;UBERON:0005174!3.83e-07!5;UBERON:0001137!3.83e-07!5;UBERON:0005284!4.96e-07!5;UBERON:0002619!5.23e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.27e-25;19!UBERON:0006925;1.27e-25;19!UBERON:0002423;1.08e-18;25!UBERON:0002368;1.64e-14;33!UBERON:0002365;6.91e-14;31!UBERON:0002330;6.91e-14;31!UBERON:0002190;2.52e-10;3!UBERON:0011135;6.40e-10;5!UBERON:0002216;6.40e-10;5!UBERON:0011134;6.40e-10;5!UBERON:0002209;6.40e-10;5!UBERON:0002213;6.40e-10;5!UBERON:0007844;6.40e-10;5!UBERON:0011138;6.40e-10;5!UBERON:0001130;6.40e-10;5!UBERON:0001066;6.40e-10;5!UBERON:0001468;6.40e-10;5!UBERON:0000949;9.29e-10;43!UBERON:0005629;1.02e-07;2!UBERON:0005358;1.02e-07;2!UBERON:0001886;1.02e-07;2!UBERON:0004086;1.02e-07;2!UBERON:0005282;1.02e-07;2!UBERON:0005281;1.02e-07;2!UBERON:0005172;1.49e-07;52!UBERON:0005173;1.49e-07;52!UBERON:0006444;5.24e-07;2!UBERON:0001995;5.24e-07;2!UBERON:0004715;5.24e-07;2!UBERON:0001897;6.01e-07;2!UBERON:0010225;6.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.62e-25,19;UBERON:0006925,1.62e-25,19;UBERON:0008836,1.62e-25,19;UBERON:0008835,1.36e-21,22;UBERON:0003894,1.36e-21,22;UBERON:0009854,1.63e-20,23;UBERON:0007499,1.29e-18,25;UBERON:0009497,1.29e-18,25;UBERON:0000015,1.29e-18,25;UBERON:0002423,1.29e-18,25;UBERON:0006235,1.29e-18,25;UBERON:0004161,1.29e-18,25;UBERON:0009856,8.90e-18,26;UBERON:0002365,2.12e-14,31;UBERON:0002330,2.12e-14,31;UBERON:0002368,2.23e-14,35;UBERON:0002417,1.95e-12,60;UBERON:0000916,1.95e-12,60;UBERON:0000949,4.49e-12,45;UBERON:0002190,1.79e-10,3;UBERON:0011135,4.88e-10,5;UBERON:0002216,4.88e-10,5;UBERON:0011134,4.88e-10,5;UBERON:0002209,4.88e-10,5;UBERON:0002213,4.88e-10,5;UBERON:0005856,4.88e-10,5;UBERON:0005866,4.88e-10,5;UBERON:0005863,4.88e-10,5;UBERON:0007844,4.88e-10,5;UBERON:0011138,4.88e-10,5;UBERON:0001130,4.88e-10,5;UBERON:0001066,4.88e-10,5;UBERON:0001468,4.88e-10,5;UBERON:0005172,1.10e-09,54;UBERON:0005173,1.10e-09,54;UBERON:0011216,5.24e-09,223;UBERON:0007023,4.79e-08,114;UBERON:0005629,1.09e-07,2;UBERON:0005358,1.09e-07,2;UBERON:0001886,1.09e-07,2;UBERON:0004086,1.09e-07,2;UBERON:0005282,1.09e-07,2;UBERON:0005281,1.09e-07,2;UBERON:0002530,3.27e-07,59;UBERON:0009569,4.62e-07,112;UBERON:0001897,4.94e-07,2;UBERON:0010225,4.94e-07,2;UBERON:0006444,5.09e-07,2;UBERON:0001995,5.09e-07,2;UBERON:0004715,5.09e-07,2;UBERON:0003929,5.29e-07,54;UBERON:0001049,8.23e-07,56;UBERON:0005068,8.23e-07,56;UBERON:0006241,8.23e-07,56;UBERON:0007135,8.23e-07,56 | |||
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| ||
|short_description=p3@PC | |||
}} | }} |
Latest revision as of 16:16, 19 September 2015
Short description: | p3@PC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000393955_5end |
EntrezGene: | PC |
HGNC: | 8636 |
UniProt: | P11498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.89e-23 | 15 |
hepatocyte | 2.65e-20 | 12 |
subcutaneous fat cell | 1.79e-10 | 3 |
adipocyte of omentum tissue | 2.08e-09 | 3 |
central nervous system pericyte | 8.41e-08 | 2 |
fibroblast of choroid plexus | 1.09e-07 | 2 |
annulus pulposus cell | 5.09e-07 | 2 |