FFCP PHASE1:Hg19::chr16:75735357..75735361,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:75735357..75735361,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr16:75735357..75735361,- | |description=CAGE_peak_at_chr16:75735357..75735361,- | ||
|id=chr16:75735357..75735361,- | |id=chr16:75735357..75735361,- | ||
|ontology_enrichment_celltype=CL:0000764!1.65e-15!2;CL:0000765!1.65e-15!2;CL:0000050!1.65e-15!2;CL:0000038!1.65e-15!2;CL:0000558!1.65e-15!2;CL:0000547!1.65e-15!2;CL:0000549!1.65e-15!2;CL:0000550!1.65e-15!2;CL:0000552!1.65e-15!2;CL:0002150!6.51e-10!3;CL:0000861!6.51e-10!3;CL:0000039!1.29e-09!7;CL:0000586!1.29e-09!7;CL:0002127!9.79e-09!1;CL:0000914!9.79e-09!1;CL:0000911!9.79e-09!1;CL:0000814!9.79e-09!1;CL:0002042!9.79e-09!1;CL:0002039!9.79e-09!1;CL:0002040!9.79e-09!1;CL:0002041!9.79e-09!1 | |ontology_enrichment_celltype=CL:0000764!1.65e-15!2;CL:0000765!1.65e-15!2;CL:0000050!1.65e-15!2;CL:0000038!1.65e-15!2;CL:0000558!1.65e-15!2;CL:0000547!1.65e-15!2;CL:0000549!1.65e-15!2;CL:0000550!1.65e-15!2;CL:0000552!1.65e-15!2;CL:0002150!6.51e-10!3;CL:0000861!6.51e-10!3;CL:0000039!1.29e-09!7;CL:0000586!1.29e-09!7;CL:0002127!9.79e-09!1;CL:0000914!9.79e-09!1;CL:0000911!9.79e-09!1;CL:0000814!9.79e-09!1;CL:0002042!9.79e-09!1;CL:0002039!9.79e-09!1;CL:0002040!9.79e-09!1;CL:0002041!9.79e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;6.62e-41;1!CL:0000911;6.62e-41;1!CL:0000814;6.62e-41;1!CL:0000764;4.66e-21;2!CL:0000558;4.66e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.62e-41,1;CL:0000914,6.62e-41,1;CL:0000911,6.62e-41,1;CL:0000814,6.62e-41,1;CL:0002042,6.62e-41,1;CL:0002039,6.62e-41,1;CL:0002040,6.62e-41,1;CL:0002041,6.62e-41,1;CL:0000893,3.11e-21,2;CL:0002489,3.11e-21,2;CL:0000809,3.11e-21,2;CL:0000808,3.11e-21,2;CL:0000894,3.11e-21,2;CL:0000806,3.11e-21,2;CL:0000807,3.11e-21,2;CL:0000805,3.11e-21,2;CL:0002425,3.11e-21,2;CL:0000764,4.66e-21,2;CL:0000765,4.66e-21,2;CL:0000050,4.66e-21,2;CL:0000038,4.66e-21,2;CL:0000558,4.66e-21,2;CL:0000547,4.66e-21,2;CL:0000549,4.66e-21,2;CL:0000550,4.66e-21,2;CL:0000552,4.66e-21,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.11e-21;2 | |||
|ontology_enrichment_disease=DOID:3095!1.05e-07!22;DOID:2994!1.05e-07!22 | |ontology_enrichment_disease=DOID:3095!1.05e-07!22;DOID:2994!1.05e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.76e-08!15;UBERON:0000179!7.76e-08!15;UBERON:0000463!7.76e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.58e-11;15!UBERON:0000179;1.58e-11;15!UBERON:0000463;1.58e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-11,15;UBERON:0000179,1.58e-11,15;UBERON:0000463,1.58e-11,15;UBERON:0002370,2.53e-11,4;UBERON:0005058,2.53e-11,4;UBERON:0009113,2.53e-11,4;UBERON:0003295,2.53e-11,4;UBERON:0005562,2.53e-11,4;UBERON:0003351,5.54e-08,6;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5710687191585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,2.87578996127391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,1.94541993357815,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3445880647709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5710687191585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,2.87578996127391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,1.94541993357815,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3445880647709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:75735357..75735361,- | |short_description=p@chr16:75735357..75735361,- | ||
}} | }} |
Latest revision as of 12:27, 25 July 2015
Short description: | p@chr16:75735357..75735361, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:75735357..75735361, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.62e-41 | 1 |
immature NK T cell | 6.62e-41 | 1 |
effector T cell | 6.62e-41 | 1 |
mature NK T cell | 6.62e-41 | 1 |
immature NK T cell stage IV | 6.62e-41 | 1 |
immature NK T cell stage I | 6.62e-41 | 1 |
immature NK T cell stage II | 6.62e-41 | 1 |
immature NK T cell stage III | 6.62e-41 | 1 |
thymocyte | 3.11e-21 | 2 |
double negative thymocyte | 3.11e-21 | 2 |
double-positive, alpha-beta thymocyte | 3.11e-21 | 2 |
DN4 thymocyte | 3.11e-21 | 2 |
DN1 thymic pro-T cell | 3.11e-21 | 2 |
DN2 thymocyte | 3.11e-21 | 2 |
DN3 thymocyte | 3.11e-21 | 2 |
immature single positive thymocyte | 3.11e-21 | 2 |
early T lineage precursor | 3.11e-21 | 2 |
erythroid lineage cell | 4.66e-21 | 2 |
erythroblast | 4.66e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 4.66e-21 | 2 |
erythroid progenitor cell | 4.66e-21 | 2 |
reticulocyte | 4.66e-21 | 2 |
proerythroblast | 4.66e-21 | 2 |
basophilic erythroblast | 4.66e-21 | 2 |
polychromatophilic erythroblast | 4.66e-21 | 2 |
orthochromatic erythroblast | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-11 | 15 |
haemolymphatic fluid | 1.58e-11 | 15 |
organism substance | 1.58e-11 | 15 |
thymus | 2.53e-11 | 4 |
hemolymphoid system gland | 2.53e-11 | 4 |
thymic region | 2.53e-11 | 4 |
pharyngeal gland | 2.53e-11 | 4 |
thymus primordium | 2.53e-11 | 4 |
pharyngeal epithelium | 5.54e-08 | 6 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |