FFCP PHASE1:Hg19::chr16:85784634..85784714,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404550 | |EntrezGene=404550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23362 | |HGNC=23362 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GX8 | |UniProt=Q96GX8 | ||
|association_with_transcript=0bp_to_ENST00000284245,NM_206967,uc002fjc.3_5end | |association_with_transcript=0bp_to_ENST00000284245,NM_206967,uc002fjc.3_5end | ||
|cluster_id=chr16:85784634..85784714,- | |||
|coexpression_cluster_id=C3597 | |||
|description=CAGE_peak_1_at_C16orf74_5end | |description=CAGE_peak_1_at_C16orf74_5end | ||
|id=chr16:85784634..85784714,- | |id=chr16:85784634..85784714,- | ||
|ontology_enrichment_celltype=CL:0000066!1.87e-29!254;CL:0002321!1.39e-21!248;CL:0000220!1.59e-21!246;CL:0000076!7.08e-18!62;CL:0000222!4.05e-16!119;CL:0000548!2.27e-14!679;CL:0000004!2.27e-14!679;CL:0000255!2.27e-14!679;CL:0000012!3.87e-14!682;CL:0002139!8.31e-13!24;CL:0000071!9.17e-11!18;CL:0002546!9.17e-11!18;CL:0000115!1.19e-10!35;CL:0002076!1.27e-10!43;CL:0000213!3.17e-10!57;CL:0000215!3.17e-10!57;CL:0002078!3.94e-09!44;CL:0000183!8.48e-08!59;CL:0000187!1.74e-07!54;CL:0000192!2.09e-07!42;CL:0000514!2.09e-07!42;CL:0000003!2.46e-07!722;CL:0002368!3.23e-07!13;CL:0000680!3.44e-07!57;CL:0000056!3.44e-07!57;CL:0000355!3.44e-07!57;CL:0000144!4.22e-07!625 | |ontology_enrichment_celltype=CL:0000066!1.87e-29!254;CL:0002321!1.39e-21!248;CL:0000220!1.59e-21!246;CL:0000076!7.08e-18!62;CL:0000222!4.05e-16!119;CL:0000548!2.27e-14!679;CL:0000004!2.27e-14!679;CL:0000255!2.27e-14!679;CL:0000012!3.87e-14!682;CL:0002139!8.31e-13!24;CL:0000071!9.17e-11!18;CL:0002546!9.17e-11!18;CL:0000115!1.19e-10!35;CL:0002076!1.27e-10!43;CL:0000213!3.17e-10!57;CL:0000215!3.17e-10!57;CL:0002078!3.94e-09!44;CL:0000183!8.48e-08!59;CL:0000187!1.74e-07!54;CL:0000192!2.09e-07!42;CL:0000514!2.09e-07!42;CL:0000003!2.46e-07!722;CL:0002368!3.23e-07!13;CL:0000680!3.44e-07!57;CL:0000056!3.44e-07!57;CL:0000355!3.44e-07!57;CL:0000144!4.22e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.77e-13;24!CL:0000071;7.04e-11;18!CL:0000115;1.41e-09;36!CL:0000076;2.42e-09;63!CL:0002076;5.06e-08;42!CL:0002368;3.74e-07;13!CL:0002078;8.22e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.50e-29,253;CL:0002321,3.46e-22,250;CL:0000076,7.40e-18,63;CL:0000222,1.11e-16,121;CL:0002139,6.72e-13,24;CL:0000115,2.58e-11,36;CL:0000071,7.70e-11,18;CL:0002546,7.70e-11,18;CL:0000213,8.34e-11,58;CL:0000215,8.34e-11,58;CL:0002076,9.07e-11,42;CL:0002078,1.11e-09,45;CL:0000192,1.58e-07,43;CL:0000514,1.58e-07,43;CL:0000187,1.66e-07,55;CL:0002368,2.90e-07,13;CL:0000680,3.25e-07,58;CL:0000056,3.25e-07,58;CL:0000355,3.25e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;7.04e-11;18 | |||
|ontology_enrichment_disease=DOID:1749!2.35e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.59e-16!69;UBERON:0002049!2.34e-13!79;UBERON:0007798!2.34e-13!79;UBERON:0001981!3.37e-13!60;UBERON:0007500!3.37e-13!60;UBERON:0004537!3.37e-13!60;UBERON:0006965!3.37e-13!60;UBERON:0004872!1.07e-12!84;UBERON:0001986!9.17e-11!18;UBERON:0004638!9.17e-11!18;UBERON:0004852!9.17e-11!18;UBERON:0004535!1.66e-10!110;UBERON:0000487!3.35e-10!22;UBERON:0001637!4.91e-10!42;UBERON:0003509!4.91e-10!42;UBERON:0004572!4.91e-10!42;UBERON:0001009!8.72e-10!113;UBERON:0000490!1.09e-09!138;UBERON:0000486!1.12e-09!82;UBERON:0006914!1.15e-09!25;UBERON:0003914!1.49e-09!118;UBERON:0004573!1.89e-07!33;UBERON:0004571!1.89e-07!33;UBERON:0000119!6.07e-07!312;UBERON:0000483!6.30e-07!309 | |ontology_enrichment_uberon=UBERON:0000055!2.59e-16!69;UBERON:0002049!2.34e-13!79;UBERON:0007798!2.34e-13!79;UBERON:0001981!3.37e-13!60;UBERON:0007500!3.37e-13!60;UBERON:0004537!3.37e-13!60;UBERON:0006965!3.37e-13!60;UBERON:0004872!1.07e-12!84;UBERON:0001986!9.17e-11!18;UBERON:0004638!9.17e-11!18;UBERON:0004852!9.17e-11!18;UBERON:0004535!1.66e-10!110;UBERON:0000487!3.35e-10!22;UBERON:0001637!4.91e-10!42;UBERON:0003509!4.91e-10!42;UBERON:0004572!4.91e-10!42;UBERON:0001009!8.72e-10!113;UBERON:0000490!1.09e-09!138;UBERON:0000486!1.12e-09!82;UBERON:0006914!1.15e-09!25;UBERON:0003914!1.49e-09!118;UBERON:0004573!1.89e-07!33;UBERON:0004571!1.89e-07!33;UBERON:0000119!6.07e-07!312;UBERON:0000483!6.30e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.04e-11;18!UBERON:0001986;7.04e-11;18!UBERON:0004852;7.04e-11;18!UBERON:0000487;3.66e-10;22!UBERON:0006914;1.48e-09;25!UBERON:0000055;2.00e-09;65!UBERON:0007500;5.12e-09;56!UBERON:0001981;5.12e-09;56!UBERON:0004537;5.12e-09;56!UBERON:0000490;9.43e-09;33!UBERON:0003914;5.87e-08;74!UBERON:0001637;6.02e-08;42!UBERON:0003509;6.02e-08;42!UBERON:0004572;6.02e-08;42!UBERON:0004573;5.09e-07;33!UBERON:0004571;5.09e-07;33 | |||
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| ||
|short_description=p1@C16orf74 | |short_description=p1@C16orf74 | ||
}} | }} |
Latest revision as of 05:49, 18 September 2015
Short description: | p1@C16orf74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C16orf74_5end |
Coexpression cluster: | C3597_Prostate_Bronchial_Keratinocyte_Urothelial_Small_Tracheal_nasal |
Association with transcript: | 0bp_to_ENST00000284245, NM_206967, uc002fjc.3_5end |
EntrezGene: | C16orf74 |
HGNC: | 23362 |
UniProt: | Q96GX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.50e-29 | 253 |
embryonic cell | 3.46e-22 | 250 |
squamous epithelial cell | 7.40e-18 | 63 |
mesodermal cell | 1.11e-16 | 121 |
endothelial cell of vascular tree | 6.72e-13 | 24 |
endothelial cell | 2.58e-11 | 36 |
blood vessel endothelial cell | 7.70e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.70e-11 | 18 |
lining cell | 8.34e-11 | 58 |
barrier cell | 8.34e-11 | 58 |
endo-epithelial cell | 9.07e-11 | 42 |
meso-epithelial cell | 1.11e-09 | 45 |
smooth muscle cell | 1.58e-07 | 43 |
smooth muscle myoblast | 1.58e-07 | 43 |
muscle cell | 1.66e-07 | 55 |
respiratory epithelial cell | 2.90e-07 | 13 |
muscle precursor cell | 3.25e-07 | 58 |
myoblast | 3.25e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.25e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.39e-16 | 68 |
vasculature | 2.37e-13 | 78 |
vascular system | 2.37e-13 | 78 |
epithelial tube open at both ends | 3.30e-13 | 59 |
blood vessel | 3.30e-13 | 59 |
blood vasculature | 3.30e-13 | 59 |
vascular cord | 3.30e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 1.10e-12 | 83 |
blood vessel endothelium | 7.70e-11 | 18 |
endothelium | 7.70e-11 | 18 |
cardiovascular system endothelium | 7.70e-11 | 18 |
unilaminar epithelium | 1.23e-10 | 148 |
cardiovascular system | 2.02e-10 | 109 |
simple squamous epithelium | 2.84e-10 | 22 |
artery | 4.19e-10 | 42 |
arterial blood vessel | 4.19e-10 | 42 |
arterial system | 4.19e-10 | 42 |
squamous epithelium | 9.84e-10 | 25 |
multilaminar epithelium | 1.04e-09 | 83 |
circulatory system | 1.22e-09 | 112 |
epithelial tube | 1.93e-09 | 117 |
trunk | 4.44e-08 | 199 |
epithelial vesicle | 5.02e-08 | 78 |
systemic artery | 1.69e-07 | 33 |
systemic arterial system | 1.69e-07 | 33 |
cell layer | 7.33e-07 | 309 |
epithelium | 7.60e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.11e-07 | 14 |